Os04g0390700

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Revision as of 11:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0390700| Description = Glucose/ribitol dehydrogenase family protein| Version = NM_001059177.1 GI:115458083 GeneID:4335678| Length = 2019 bp...")
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Gene Name

Os04g0390700

Description

Glucose/ribitol dehydrogenase family protein

Version

NM_001059177.1 GI:115458083 GeneID:4335678

Length

2019 bp

Definition

Oryza sativa Japonica Group Os04g0390700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19254097..19256115

Sequence Coding Region

19254202..19254634,19254751..19254836,19255203..19255334,19255448..19255612,19255715..19256005

Expression

GEO Profiles:Os04g0390700

Genome Context

<gbrowseImage1> name=NC_008397:19254097..19256115 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:19254097..19256115 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagacgctgagcatgctgaaggtggggtacaccctgctgcggagcgagacgccggcgacggacctcgtcaacgccttcatggactgggcggcgcgccgctcgctgctcctcctcgccgtcttcgtgccgccctacctcgcctacaggctcgcctcctcggcgctagccgccgcgtcgccggaggacgtcgccggcaaggtcgtcctcgtcacgggcgcctcgtcggggatcggcgagcaggtcgcgtaccggtacgcgcggaggggcgcgcggctggcgctggtggcgaggagggaggcgagcctgggggaggtggcggcgagggcgagggcgctcggctcgcccgacgtgctcgccgtccccggcgacgtcgcgaggcccgacgactgccggcgcttcgtccaggccaccgtcgaacacttcggccgcctggatcatcttgtgaacaatgctggcttggccaacgtgtgctggtttgaggaggtgccagatgttgctaatttcaaacaagtcttggatgtgaacttctggggtacggttcacccgacgcacgccgctctcccccatctcaaggcgagccgcgggaagatcttcgtcaactcctcggcatcggctgtgctcgccatgccaaggatgagtttctacaatgctagcaaggccgcggtgcacaacttcgccgagacgctgcggatggagctccacggcgaggtcggcgtgacggtggcgacgccggggtgggtggactcggagatgaccaaggggaagcacctgtccagccatggcgcaatggaagtcgaccaggacaccagggatgctcaggtgggggtgttcccggtggagcgcggcgagcggtgcgcggaggcgatcgtggacgcggtggcgcgcgggcggcggcgggtcacctcgccggcgtggtacggggcgctgttcctgtggcggacgatggcgcccgaggtggcggacgcgtgccagcgcgtgttctaccaccggcggagctccgccgccggcggcggagggagggcgagggcggcgctggaggccaccggcgccaaggccgtgctgcagccgccgtcgctgcgcagctcggagatcaaagtggagtag</cdnaseq>

Protein Sequence

<aaseq>METLSMLKVGYTLLRSETPATDLVNAFMDWAARRSLLLLAVFVP PYLAYRLASSALAAASPEDVAGKVVLVTGASSGIGEQVAYRYARRGARLALVARREAS LGEVAARARALGSPDVLAVPGDVARPDDCRRFVQATVEHFGRLDHLVNNAGLANVCWF EEVPDVANFKQVLDVNFWGTVHPTHAALPHLKASRGKIFVNSSASAVLAMPRMSFYNA SKAAVHNFAETLRMELHGEVGVTVATPGWVDSEMTKGKHLSSHGAMEVDQDTRDAQVG VFPVERGERCAEAIVDAVARGRRRVTSPAWYGALFLWRTMAPEVADACQRVFYHRRSS AAGGGGRARAALEATGAKAVLQPPSLRSSEIKVE</aaseq>

Gene Sequence

<dnaseqindica>106..538#655..740#1107..1238#1352..1516#1619..1909#agagctcagatcagcaattcagcatacatacgacgtcgacgtacgacgacgaggaagaagaggagatcggaggaggcaggcagctgccgagatcgatcgaccgccatggagacgctgagcatgctgaaggtggggtacaccctgctgcggagcgagacgccggcgacggacctcgtcaacgccttcatggactgggcggcgcgccgctcgctgctcctcctcgccgtcttcgtgccgccctacctcgcctacaggctcgcctcctcggcgctagccgccgcgtcgccggaggacgtcgccggcaaggtcgtcctcgtcacgggcgcctcgtcggggatcggcgagcaggtcgcgtaccggtacgcgcggaggggcgcgcggctggcgctggtggcgaggagggaggcgagcctgggggaggtggcggcgagggcgagggcgctcggctcgcccgacgtgctcgccgtccccggcgacgtcgcgaggcccgacgactgccggcgcttcgtccaggccaccgtcgaacacttcggccgccgtaagtgtcattctttgcatgcgtttttgcctgaattttgcagagactgtattgacggacctgcatgtttgcctgaattttagagtctgaatttatctcttttcgcattcgtgcagtggatcatcttgtgaacaatgctggcttggccaacgtgtgctggtttgaggaggtgccagatgttgctaatttcaaacaagtcttggtactactgcattttcctctactactactatttcatactcctgtctttttcttctttcttgattcaactcacagtcaagtgagtcaacggatcgaagaatttgatgatgttaatgaaacacagtacagtttcagtaagaaaatttaacatgtaattgattaacaatcacttctctcaccatttgaaccaccatgatacatgcattaccatcagtatatctaatatattgatgtgcaatcattttactgagttcgtgaaaaattaccatcagtatatatgttcagtaatccatgtgacaaacaaaggatgaattgagttttgtcagaactctgaattaatctgaactaccttgttcaattgctgcaggatgtgaacttctggggtacggttcacccgacgcacgccgctctcccccatctcaaggcgagccgcgggaagatcttcgtcaactcctcggcatcggctgtgctcgccatgccaaggatgagtttctacaatgtattaatcgtacattttttactcccaactcttttatctctactgggattggaatcatcatgaacacattactggagtatatatatagatagttagatactgttgtgtttcaggctagcaaggccgcggtgcacaacttcgccgagacgctgcggatggagctccacggcgaggtcggcgtgacggtggcgacgccggggtgggtggactcggagatgaccaaggggaagcacctgtccagccatggcgcaatggaagtcgaccaggacaccagggatgtgagtaacaagaggtttacagttaaattaaacccatcgctaatctgaatatttcaggtaattaatcgtgtatgtctttaatttgtgcttttggctgtgcaggctcaggtgggggtgttcccggtggagcgcggcgagcggtgcgcggaggcgatcgtggacgcggtggcgcgcgggcggcggcgggtcacctcgccggcgtggtacggggcgctgttcctgtggcggacgatggcgcccgaggtggcggacgcgtgccagcgcgtgttctaccaccggcggagctccgccgccggcggcggagggagggcgagggcggcgctggaggccaccggcgccaaggccgtgctgcagccgccgtcgctgcgcagctcggagatcaaagtggagtagatgacgatgtgaaggcgcgcggcttcttttgctgttgcaagctttgtgttgagaaagaaaaaatggggaataaaagtttgggaaaatgtacgtgcttgtggtgatcgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0390700, RefSeq:Os04g0390700