Os04g0393300

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Revision as of 11:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0393300| Description = Conserved hypothetical protein| Version = NM_001059183.1 GI:115458095 GeneID:4335685| Length = 4079 bp| Definition ...")
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Gene Name

Os04g0393300

Description

Conserved hypothetical protein

Version

NM_001059183.1 GI:115458095 GeneID:4335685

Length

4079 bp

Definition

Oryza sativa Japonica Group Os04g0393300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19355486..19359564

Sequence Coding Region

19355822..19355877,19357610..19357780,19359170..19359350

Expression

GEO Profiles:Os04g0393300

Genome Context

<gbrowseImage1> name=NC_008397:19355486..19359564 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:19355486..19359564 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagaaggaggagggcaaggtggcggcggagggtggggcggaggcggaggccgacgaggaggtggaggtcaagttccgcctcttcgacggctccgacatcgggcccctccgctgcaacgccgtcgccaccaccgtcgccgccctcaaggaccgcgtcgtcgccgactggcccaaagataaaacaattgtcccgaagactgctaatgatgtcaaactgataagtggaggaaaaattctagaaaacgacaagaacattgcgcagtgcagagcaccttttggtgatcttccgagcactgctatcacaatgcacgttgttgtgcagccatcatcagccaaatcaaaacctgacaagaagaccaacaagttgccaaagaccactcgctgctcatgtaccatactatga</cdnaseq>

Protein Sequence

<aaseq>MAEKEEGKVAAEGGAEAEADEEVEVKFRLFDGSDIGPLRCNAVA TTVAALKDRVVADWPKDKTIVPKTANDVKLISGGKILENDKNIAQCRAPFGDLPSTAI TMHVVVQPSSAKSKPDKKTNKLPKTTRCSCTIL</aaseq>

Gene Sequence

<dnaseqindica>3688..3743#1785..1955#215..395#aaaggaaaagagagagccctcctctcctctcctaccctcttcttcctcctcctcctcctcgcctcccaccaaaccctagcacgagcagcccaatccatctccagcctcacgagctccagttcggagcagcctcgcggtgggacgagtcgccagttggggagctcggaggaggtgaggccgtggttgggggttgggaaggggggaaggccaagaaatggcggagaaggaggagggcaaggtggcggcggagggtggggcggaggcggaggccgacgaggaggtggaggtcaagttccgcctcttcgacggctccgacatcgggcccctccgctgcaacgccgtcgccaccaccgtcgccgccctcaaggaccgcgtcgtcgccgactggcccaaaggtttgcttctccggtctctccccggatcaccccccgggttctagctgttcactgtcccctgcgtgatccgtggtgctgaattggtagagggatccttgattttgctttgctagtatttgtttcgcggcgcgcggcgacgggaggaggagatagtagtaacgctcctttgacttggggatagatagattcttgcttcgttagatttgcttagcctagtgactagtagtgagatgactagatggtttgacacttgtctctgattcggggaaaagaattgtggggggtggggtgcacctattattagcaaagcttgttttattgatattctaaatggaggtttagtttaaattggcgggtgtttaatgcgtattattcatgatggtctctggtacctaagtgggattggctggtgggatgttttggttgcgatcgggaccatagcgtaatgtgatgaagagatggtaatgtgtttatggttgcccgttggatgtatgaggaggattaggttgggatttaattttgattaaaaacaaatcctattccgatccccctcaatcgattaatcgaactggctcaacgcaatcaaaagttatgcaaggcatcttaggttcatgcatatgtgcaactattcactcggactccctgaacaggcatggtcgcatcatttcattttaggatgctgttaaaagaggagaaaagcttctggagcttgacgtgatgcccaagcatctgagatagtcggcagtgttcaggattgttgctatggagcattgaagaggttggctgcagcagagtagcctgtagagagcaaaataggaaggccatgaagctttgcaacacgcaaagttccaagagaactcatggtgttcaagctgaggttacgtattgcattgttggcagctatcctattctcatcaaatccttgtcacatccacacaggaggatgagaccatgagagagcacaccatattctctacttcagttggtaggagcctgaaagatattgccatcctgtggtgttagttctgattttgcccaatacatttccatgttttttcttgcacacatataaataatatgggacactgtgttttgttcttgtctcattgaaagtgttttggtaacaatagctgctttcatgatacacatttgctctttctccgatacttcatttcgttttgatgtgatacaatacctactgaccttcactctggaccgtacattgatagtttatacaatacaaaatccctccccccccccccgcgaatgtatgtgggtagttttttttttccccataacaagcatatgtgttgctatacacatgttcataatatttatctgtaatatatttgtgcgatgcttctaatttctgcaatgatttggttgtagataaaacaattgtcccgaagactgctaatgatgtcaaactgataagtggaggaaaaattctagaaaacgacaagaacattgcgcagtgcagagcaccttttggtgatcttccgagcactgctatcacaatgcacgttgttgtgcagccatcatcagccaaatcaaaacctggtgagctatattacttcatagaaagtatgttggactgcttgacatagtctagatttatagcttgtgttaacaatcatgataaccagggagtaaattgtttctcttgcttactctggatttgttctctctgtttattatgatttcactaattcataattcatattttgccaaatctgttttggcaaaagttgagtgcaatagatttcattgatttcctgaagtgaactttttcttaaaatatcactgagatgacattaaatttggaactgttcgagatttctgtttaggaatcagcgaagtaagctgtcagctatcctgcaatatgtactacctctggttattaatagttgatgccacacagagttgacagcagctgtctggcatcagcttaatatgactggatggagtagttaaaataatgacctttccttcgctgtttcaaagctgttactagggcttctcctgccagggcatatgttttgttttccggttgattccctctagtaatcaccacttttggaattggccaaaggcaacaacaaactgcctatacttgaaatatgccactatatcagatttgtcaaatatagcaccatgaacagtgttactgttacgtaattaaaaaaaggtaaaaaaggaccctacacatttgctctcaactctcaaagctataaatttaccattttcattttggtgctgttacatattcataaatattaaagatacaattcaaatacaatacaagtttggattaaaacatcaaagaaaaataatccatgtaaaatacattatatagctgaaattcttaacagcttttttttttggcaatttaaggtccataggaataccgaaataaattctctcaataactataattcatagtgaatattaaaatgctccctccgtcctagtatataagggattttggatggatgggacatatcctagtactacgaatttagatggagggagtatgatctagcggcacacaattgtgcaggaaataagtcggctagcattgtattagaagatgtgaccaaagaaatggtctaacctgttgtttattttctgaaggctgtccaggattcaaaagcatgccttggccaaaatattagtttgctagtgtaagctatattagctaaatccccatggctctgctgcagataaaaataaaattgtacatgatgtgatatttttttaagaaaggatagtttttttaattgaacattcatagatatggagcacttaaaaattacataattctaaccgtaaagtttagcttgtacattcatatatatgtcaacttagaccttttttgtgttaattttattttagagactaagtaagaaagtaaggatgtgataggactaatgtgtactattgaagaacttccttttaacattttagaactatggattatccctcttctactctgattttagtgctgttctcttggttactgcttagcgatttttttttgtgctatgtaatttgaagtcataagctagttgaactgtgatggccaactgtttgccaagaatgctcatttatacaaacgatatgaacatgttctattttagtatttcagtcaatgaacactgaggtaatgattctggtaatagggactgcaagttacacatgttacagtctcaattgtcaacagcacatgctaaaatctgatgaaacccggattctgttttctctgtttttttccccttttttgttgtggcagacaagaagaccaacaagttgccaaagaccactcgctgctcatgtaccatactatgaaggttcagtgtcaactccatcgacaataatttgtatgtccgtgaaaattatgcagagagacaacgaatggagagaagattgaagaaaatctggtgccagaggagtccgatgtgttgtgagattgtattgtaattgtaagcttagatactacagagagttcgtccctctgcggctagggaaaaatagatgtcgttcggtcggttgcttgtctgttttacccaacaaaatgtttctatatgatgtacaatatacacatacatgctgttctggaggaagaagttggttgtttttccgtgtcaagttcagttcagttcagaattttgaggtttcttggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0393300, RefSeq:Os04g0393300