Os04g0397500

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Revision as of 11:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0397500| Description = Homeodomain-like containing protein| Version = NM_001059202.2 GI:297602638 GeneID:4335704| Length = 2666 bp| Defini...")
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Gene Name

Os04g0397500

Description

Homeodomain-like containing protein

Version

NM_001059202.2 GI:297602638 GeneID:4335704

Length

2666 bp

Definition

Oryza sativa Japonica Group Os04g0397500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19634089..19636754

Sequence Coding Region

19634089..19634375,19635567..19635608,19636094..19636754

Expression

GEO Profiles:Os04g0397500

Genome Context

<gbrowseImage1> name=NC_008397:19634089..19636754 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:19634089..19636754 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctggcggcggcgaggtgtcggggagggcgccgcggctgccgaggtggacgaggcaggagatactggtgctgatagaggggaagcgggtggtggaggggcgagggagggggagggggcggggcggcggcggcggcgccgccgcggagccgaccaagtgggcggcggtggcggagtactgccggcggcacgggctggagcggggccccgtgcagtgccggaagcggtggagcaacctcgccggcgactacaagaagatcagggagtgggagcgctcgctgtcgtcgccgtcgtcgtcgtcggcggcggcggggatggggaaggaggtgtcgttctgggcgatgcgcaacgacgcgcggcgggagcggcggctgccggggttcttcgaccgggaggtgtacgacatcctcgagggccgcggcggcggtaatgcggcggcggcggcggcggcggggaaggagggggaggaggagaaggcggcggtgttcgacagcggccgcgccgcggccggcggcggcggcggcggcggggatgatgggctcttctcgtcgtcggaggaagaggaggacgacgacgaggcgaccccgccggcgaccaccccggccgctgccccggccccacctccggctccggcgccggcggtgcccgtcctgacatccgagaagaagagtgatccacctaggcaagatgcctcagagcaagcggggacgtccagagccaagcaaccggaacaaattgtcgaggactcaccagctcagggcgcgcacaagaggcagcgcagcgacgacgcctcaggagaagctcctgatctgcaggggcagctgatcgaaatcctagaccggagcagccggatggttgcagcccagctggaggcgcagaacatcaactgccaactggacagggagcagaggaaggaccaagtgagcagcctacttggtgtgcttggcaaggtggctgatgccctatacagaatcgctgataagatgtag</cdnaseq>

Protein Sequence

<aaseq>MSGGGEVSGRAPRLPRWTRQEILVLIEGKRVVEGRGRGRGRGGG GGAAAEPTKWAAVAEYCRRHGLERGPVQCRKRWSNLAGDYKKIREWERSLSSPSSSSA AAGMGKEVSFWAMRNDARRERRLPGFFDREVYDILEGRGGGNAAAAAAAGKEGEEEKA AVFDSGRAAAGGGGGGGDDGLFSSSEEEEDDDEATPPATTPAAAPAPPPAPAPAVPVL TSEKKSDPPRQDASEQAGTSRAKQPEQIVEDSPAQGAHKRQRSDDASGEAPDLQGQLI EILDRSSRMVAAQLEAQNINCQLDREQRKDQVSSLLGVLGKVADALYRIADKM</aaseq>

Gene Sequence

<dnaseqindica>2380..2666#1147..1188#1..661#atgtctggcggcggcgaggtgtcggggagggcgccgcggctgccgaggtggacgaggcaggagatactggtgctgatagaggggaagcgggtggtggaggggcgagggagggggagggggcggggcggcggcggcggcgccgccgcggagccgaccaagtgggcggcggtggcggagtactgccggcggcacgggctggagcggggccccgtgcagtgccggaagcggtggagcaacctcgccggcgactacaagaagatcagggagtgggagcgctcgctgtcgtcgccgtcgtcgtcgtcggcggcggcggggatggggaaggaggtgtcgttctgggcgatgcgcaacgacgcgcggcgggagcggcggctgccggggttcttcgaccgggaggtgtacgacatcctcgagggccgcggcggcggtaatgcggcggcggcggcggcggcggggaaggagggggaggaggagaaggcggcggtgttcgacagcggccgcgccgcggccggcggcggcggcggcggcggggatgatgggctcttctcgtcgtcggaggaagaggaggacgacgacgaggcgaccccgccggcgaccaccccggccgctgccccggccccacctccggctccggcgccggcggtgcccgtcctgacatccggtgagcgcggctgctccattcttgcacgtaaaaattgaggctttcctgtgttcttggttgacaaaaagaagaagaagaaggctgcgaatttgtgtacttcaaagaactgaatttggggtgtgtgatgggtgggttagttgcctataaaaattgacgtttcgattgcaaaacaactgttcttttttttatggtaacagttcatgttatgcatcgaatttccctgtgagttcaatcacttgatggcttgatgcccatcttcctttttcagaaaatttcttgttcagttctttgtggtggtctgaactctgaagagttggaatttgcaagtagttgtgtttttggtctttgttgctaacctaatggatattctgtttcttctgtttttttttaaaaaaaaagtgatcaatatgtttattttcacctggcaaaggtttgtttttggttggctgattactgtttttgctcctgtggtttgttggttgcagagaagaagagtgatccacctaggcaagatgcctcagagcaaggtactgataaataaccggatttctaccttgcagttctccccttttttttccccgctcacgttttgcatgtgcttcagcatcccctgatcttccacaattttttactgttccattgctttgatcagataattcttggcagcaatatttaaacattgtgtcactgcgtatagtttagatatgaaaatagaaattaactaataacagaattgtagggagcctgaacacaaaaagagaactcaatggtaattatcatccctaaaagatcaaatcaaattataccttaaacgcgtgtgttgtgcccttgtcaaattgttctatgagagaactgtatctgactttgcttacaatacagtcccgaatatatgaagcaatctaggacccaaggaccttgggtgaaagcacaaacatatttctactaattaatcacaggcagcaattgtggcttgtcttcatttgacaacaaaatgaataaattggcagtcaacagattcgatcgtaaagtttgtctgttgaatttattaacatacatgtgaagcatcaaattttagcaggtttgcgacattccgagaaacactcagtttcacgcagtgctggttcagaataaatgcccaaaatgcaaaagatgcagactaggagccttttgttattagtaccagcgaactgattgtatcattcagcgcatagtgacccttttttcagaaattgtatgagggcagtggatattccatcattaacttttgcccagcaaggtggaaagcttcttttcaagtattgtgataaagaaatgaatggaagaagtataattatttcactgcatttatcctgttcacttcacctttccatattacattatgctatcttccctacttgatacagtactgaataaacatgatcagcgacctgttcctcgctagtttttacttgtgtgtttcagagatacttgtatagtctaatatgcaacaaaaacataaatcaacagcagtaggatacacagcaggagtattaaacttcaggatcacctcatgagaagaaacaaaagttatagtagcctttttttttcttttataaaaagggaaattgtgtttatcttgaattgaaacattgaaagcccctttgatgctagaactttgcacattcatgcaacaaagtcagaaaaactgcatttatctaaccatctaaatttcttgacagcggggacgtccagagccaagcaaccggaacaaattgtcgaggactcaccagctcagggcgcgcacaagaggcagcgcagcgacgacgcctcaggagaagctcctgatctgcaggggcagctgatcgaaatcctagaccggagcagccggatggttgcagcccagctggaggcgcagaacatcaactgccaactggacagggagcagaggaaggaccaagtgagcagcctacttggtgtgcttggcaaggtggctgatgccctatacagaatcgctgataagatgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0397500, RefSeq:Os04g0397500