Os04g0405500

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Revision as of 11:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0405500| Description = Conserved hypothetical protein| Version = NM_001059245.1 GI:115458219 GeneID:4335750| Length = 1461 bp| Definition ...")
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Gene Name

Os04g0405500

Description

Conserved hypothetical protein

Version

NM_001059245.1 GI:115458219 GeneID:4335750

Length

1461 bp

Definition

Oryza sativa Japonica Group Os04g0405500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20141570..20143030

Sequence Coding Region

20141759..20142609,20142981..20143029

Expression

GEO Profiles:Os04g0405500

Genome Context

<gbrowseImage1> name=NC_008397:20141570..20143030 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20141570..20143030 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcgcgtaggcgtatccaagatccggtggtgcggagctttgcttgcggggcctcggcggctggcgggctcaagaggagcaagtcggtggcgccgcgtccggaggagacgacgccggtgacggcgcccgctccgtccgcggtcaccgcggacagcccgaggaagaagagcttctggtccttcctctactcctcgtcctcgtcgtcgagcggcggccaccagggctcggcgtcgatggccaacggtggcggcggcggcggcgcgtcggtgaggaggaagtcggtgtcggtggcctcggcgtcgtcggcgtcgctgggacggaggctggaggcgatagtggagccggacagccccggccgccgtagcgagggctcgtcgtcgtcgtcgttcgggaggaaggtggcgcggtcgcgctccgtggggtgcggcagccgcagcttctcgggggacttcctggagcgcctctccaccggcttcggcgactgcgcgctccgccgcgtggagtcccaccgcgagcccaagcccaagtcgtccgccggcgcgctcgcccacctgggcggcaaccactccgccgccggcaacggcgacgacgacgagtacgagtccacccagcagcaccgcatcaagtgcgccgggttcttcggcggtctcggcgccgcgccgccgcccacgtcgtcctcctactggctgtccgctgccgacggcgccaccgccgccgcccccagcgcaagaacccacggcgcgcgtagccaccggagctgggcgtgggcgctggcgagcccgatgcgagcgctgaggccgacgagctcctcctccagcaaatccatcatggccgcgccccacaaccgcggcggcgtctccggcaacggcggcatggcgatggccgcggtggcgacgagctag</cdnaseq>

Protein Sequence

<aaseq>SRRRIQDPVVRSFACGASAAGGLKRSKSVAPRPEETTPVTAPAP SAVTADSPRKKSFWSFLYSSSSSSSGGHQGSASMANGGGGGGASVRRKSVSVASASSA SLGRRLEAIVEPDSPGRRSEGSSSSSFGRKVARSRSVGCGSRSFSGDFLERLSTGFGD CALRRVESHREPKPKSSAGALAHLGGNHSAAGNGDDDEYESTQQHRIKCAGFFGGLGA APPPTSSSYWLSAADGATAAAPSARTHGARSHRSWAWALASPMRALRPTSSSSSKSIM AAPHNRGGVSGNGGMAMAAVATS</aaseq>

Gene Sequence

<dnaseqindica>422..1272#2..50#gtcgcgtaggcgtatccaagatccggtggtgcggagctttgcttgcggggatcgatcgcaggaggtgaggtgacgggtgtgagaatggaggagaaagtgggggagacggtggcagcggcggcggtggcggtggcgcctgtggtggcgggggaccaggacggagtggcgtactgcagcgagcatccgtacccgcctggcgcggctgcggcggctggggtggcagccggcggcggcatatgcgccttctgcctgcaggagaagctcggcatgttggtgtcttcgtccaagtccagccctttccacccgccgccggcttccgcctcctcgtccactccgaccagccacgtcgctgctgagtcgtcgtcgtcgtcactgcctctccacccttccgccgccgccgcggcgcgcaaggtgatcccggcctcggcggctggcgggctcaagaggagcaagtcggtggcgccgcgtccggaggagacgacgccggtgacggcgcccgctccgtccgcggtcaccgcggacagcccgaggaagaagagcttctggtccttcctctactcctcgtcctcgtcgtcgagcggcggccaccagggctcggcgtcgatggccaacggtggcggcggcggcggcgcgtcggtgaggaggaagtcggtgtcggtggcctcggcgtcgtcggcgtcgctgggacggaggctggaggcgatagtggagccggacagccccggccgccgtagcgagggctcgtcgtcgtcgtcgttcgggaggaaggtggcgcggtcgcgctccgtggggtgcggcagccgcagcttctcgggggacttcctggagcgcctctccaccggcttcggcgactgcgcgctccgccgcgtggagtcccaccgcgagcccaagcccaagtcgtccgccggcgcgctcgcccacctgggcggcaaccactccgccgccggcaacggcgacgacgacgagtacgagtccacccagcagcaccgcatcaagtgcgccgggttcttcggcggtctcggcgccgcgccgccgcccacgtcgtcctcctactggctgtccgctgccgacggcgccaccgccgccgcccccagcgcaagaacccacggcgcgcgtagccaccggagctgggcgtgggcgctggcgagcccgatgcgagcgctgaggccgacgagctcctcctccagcaaatccatcatggccgcgccccacaaccgcggcggcgtctccggcaacggcggcatggcgatggccgcggtggcgacgagctagccatccaacatgcaacaaacaccaccgcacacaagtcacatccggcatggtcggtcgatggccacccgaactacactcctccataatttctttatttatttcgcgcgtgttgttatgtgatgtccatggttaaaccctgctatgatatgaaatcaatcgatctccagatgaacttgaccttgatttgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0405500, RefSeq:Os04g0405500