Os04g0409500

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Revision as of 11:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0409500| Description = Metallophosphoesterase domain containing protein| Version = NM_001059259.1 GI:115458247 GeneID:4335764| Length = 471...")
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Gene Name

Os04g0409500

Description

Metallophosphoesterase domain containing protein

Version

NM_001059259.1 GI:115458247 GeneID:4335764

Length

4717 bp

Definition

Oryza sativa Japonica Group Os04g0409500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20267537..20272253

Sequence Coding Region

20267852..20268049,20270654..20270833,20270918..20270985,20271679..20272204

Expression

GEO Profiles:Os04g0409500

Genome Context

<gbrowseImage1> name=NC_008397:20267537..20272253 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20267537..20272253 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctcctccgccaccgccgccgcctccccgcgtggtgatctgcgtgggagacgtccacggctacatctccaagctggagagcctgtgggcgaacctccagtccgcgctcccgcccgacgccttcgccaccgcgctcgtcgtcttcctcggcgactactgcgaccgcgggcccagcacccgcgaggtcatcgacttcctcctcgcgctcccgtcccgccaccccgcgcagcgccacgccttcctctgcggcaaccacgacctcgccttcgccgccttcgtcggggcgctgccgccgccgcccgacggcaccccgttctcgtccacctggggggagtacatccagaacgaggagaacgaggggtggtaccgtggccccggccacgaggggatgcattgccaggggaggagatggggcgggatcatgaaggagaagaggaatcccaagagggggtcatcgtacatgggctccatctacgacgcgcgccctaccttcgagtcctacggcgttgctcatggatccccagatcttgtgaaggctgtacctgaggagcacaaaaaatttctgcgcgaattggtttggatccatgaggaggaaaatgtacccattgatactaacgaaggacagattatttgtaagcttattgcggttcatgctggcctggagaggtcgattgatttgaatgaacagtttagaattttgagaactaaagatacaaagatatcaaaggttgcaatgctaagcgggaggcaggacgtttggaacataccaaaggatctggctggcaagcagaccatcgttgtaagtggacaccatgggaagctccacattgatggcctccgattcgtcatcgatgaaggtggcggatatgcagacagacctatagctgctattgtgtttccttcgaaggaattgatcaggagcacagaaggaacttcatcccagaatcgatccagatatcatcaggagtag</cdnaseq>

Protein Sequence

<aaseq>MSPPPPPPPPRVVICVGDVHGYISKLESLWANLQSALPPDAFAT ALVVFLGDYCDRGPSTREVIDFLLALPSRHPAQRHAFLCGNHDLAFAAFVGALPPPPD GTPFSSTWGEYIQNEENEGWYRGPGHEGMHCQGRRWGGIMKEKRNPKRGSSYMGSIYD ARPTFESYGVAHGSPDLVKAVPEEHKKFLRELVWIHEEENVPIDTNEGQIICKLIAVH AGLERSIDLNEQFRILRTKDTKISKVAMLSGRQDVWNIPKDLAGKQTIVVSGHHGKLH IDGLRFVIDEGGGYADRPIAAIVFPSKELIRSTEGTSSQNRSRYHQE</aaseq>

Gene Sequence

<dnaseqindica>4205..4402#1421..1600#1269..1336#50..575#gtgtgttatcagcaacctgtgggaaacaggaaacgacgccggcggcgagatgtctcctccgccaccgccgccgcctccccgcgtggtgatctgcgtgggagacgtccacggctacatctccaagctggagagcctgtgggcgaacctccagtccgcgctcccgcccgacgccttcgccaccgcgctcgtcgtcttcctcggcgactactgcgaccgcgggcccagcacccgcgaggtcatcgacttcctcctcgcgctcccgtcccgccaccccgcgcagcgccacgccttcctctgcggcaaccacgacctcgccttcgccgccttcgtcggggcgctgccgccgccgcccgacggcaccccgttctcgtccacctggggggagtacatccagaacgaggagaacgaggggtggtaccgtggccccggccacgaggggatgcattgccaggggaggagatggggcgggatcatgaaggagaagaggaatcccaagagggggtcatcgtacatgggctccatctacgacgcgcgccctaccttcgagtcctacggcgttgctcatggatccccaggtcagtgttcaggagtaccgcacaagatttattcatctgtattcatgctttgcaatggaacataacggaccataggtgactggcactaagccactagtaactctctagattgttatcgtttggcttcaaacttgaaaattctgattgctttcccaaaatgttaaaatgctatacaatgcgtaaaccttaaaagaagttctgaaatccaaatgccaggaaatatgaaatcaatgcacaattgtctatttctctagttacaatcttaggaattagtactttagtactgtttacaaagcacaaaagtataagaccatgataacatttatagacaggtgaattttgtatacactaacagaattagcgccaaacttattttatagtacttcgatgacctgtagtctcaacataacaaaatttagcaagctagcgagcagttcaccaacagtgaaggtaacttttcaaggtagtgtcatttagcccacctaatgaaagcaaacaacgaattgatgcctctcgtgcagggtttgtaagcatggtttcatagtacaactcccgctgcaactatacaaagctacttctaatttgctactattgtttttaccagtaaatacagcttttgagagagggagggagggatccctgattcccttcaatagaaaccaccaatgcttacaaagttttattgtcattcagatcttgtgaaggctgtacctgaggagcacaaaaaatttctgcgcgaattggtttggatccatgaggaggtatgctatccttttatggtgcaaagtataatgagaggtgcaaagggagtttgtttcttagatatttgcatggttgtatggcaggaaaatgtacccattgatactaacgaaggacagattatttgtaagcttattgcggttcatgctggcctggagaggtcgattgatttgaatgaacagtttagaattttgagaactaaagatacaaagatatcaaaggttgcaatgctaagcgggaggcaggacgtttggaacataccaaaggtgagcaaatatttcatcccattgcagattgcacactcttggtaccacaacataaaagttatgcttctattaggttttcgcattgcctaacttgatgtttctgcaaactcaatcccctctcacatacctcaaagatgtatcattcaatgcaccaaagtgccattgttctctactatagcgaagagatcaacatatcctgcagaacactttggtctttagtatctattttagatgctattctagtctcacaaatgcatctataaacactttgataattgagcagtattcaaggtgctttctatatacaataaatagatctttacatcattgtttgttgggtcaatattgtgtcatgctagtaggattttggctgtaaatgacccaacttagggttggagtttaattctagcaacggtctgttcccagttcccactattctaaactgagaaaatcaatatccgtattttttcctctgtggtcttatgccatgtcaagacattttagtcccctctaagaaataaagtttttaacaagttcgtttactgaaggattacgtaccctgaaaggtgagataaaataaaatggtaaatcctttactgagtgtgataatctttagttattatgaaccaagtagaggcactggaccatatttgtgctatctcatcttaacataaagtgtttaaaccagttaatttgttttgacttttgacatagccttggtgaatttatagaaaaataacctaatatgcagtcagatttattaaagttgctctcacgttttaaatgacattctgttaaaaattacaggcagtgggctattgagtattcctagtaaacagttatcagtgtgcgtttcgctggtttcattgtattttgtcataccattttgaaattccataggcataaggaaaaatctattgttggttcttgaactctgttgtgagtccaattttcaccaaacttcaaaaacctgctgttttgcatccccaacttccaaacccaaagaaataacttcctgaaccatttttcaagttggttttgctgacatggactcccactagccaaatttcggggtagatgccacttagatgggtccatgttagccaaacctgcacgtttgcgaaaaagatcaccattttggccaacatttcacagaataggttctagggtattggagttggatgttcagtgtgaaaaatatgtggctgttgagttttaggttgagaactggaattcgagcaatgttcgagggccaaaatgggcttgttcttatgtcctaacccccctatagaaacctcattagtttatcttgatattgatattttttatggtttagcttatttacaaattgcaactgaggcgactattgtacaggaacaggaggaaagtaggaaacgccactaaaatcaaggtctaggtaaaaacaaaaagacagtggattcgttgacaacagctcctgagagttagcagttatccatgctagttgtgagttgtggcgttaccttgtcatacaggggtggatctagggcccaaccaccctgggcgcccaggctcctcggcctgcaacagtggaacggcttctctgctgtgctgcgtagcaggcaaatcagcactttatttgggcagctaggagcactagcaagcgtctttcacaggctgggatcgccaagcacatgaaggcatgctacgaggctggctgcccgcctccatgactctaggttgttcggtgcgtggccatgtgcggcacatcacacatatggtggcactggtcgcgcactagtacaccacttagcttgactgcttgagcacgcttggtgttgtagtcttttagaaaggcaacagcaattggccaatcatcaggagcataggaagtaccaagagttgttttgttgattagtgtttatagtttcgtataatctatatttgagtttagtcaactagactttcattggattaggatcctctgtgcttatctattgctagctcttgctcaaattgcagaatgatgtggtgcttagttgatacaagcaacaatgctgaaactcttagtggtgaaccttacatgtgtgaaagatctttgcgcattataagtcattggtagactttcccaggatcaggaaaattcctggctccgcccctattgccataggaatataggatcatagccaaaatttttaatgtgatgatttaggcctgaccatatactaaacatcttatttgattgacagttttttatagatggtttgatgagccctgtggcaatgtggccagaagtgggtctactatagctgcatcctttgtcttttttacctgttgtgttcttatcgtgttctcactgaaacaagcaagcacatggtgtgtgtgcatgatggcagtgcatgtgatggactgccaacagctaattcatggcatacataacataagcaattgctacatgattttgtttcataacggatacatgcctgacttttacataggtgggtcacataatctttttttcaaaaggcggccacataatcttttgaaactctggtagtgctactactattattttgcctatcaaaacgaacacatgaaatgttgatgtacaatcttcttcttcaggatctggctggcaagcagaccatcgttgtaagtggacaccatgggaagctccacattgatggcctccgattcgtcatcgatgaaggtggcggatatgcagacagacctatagctgctattgtgtttccttcgaaggaattgatcaggagcacagaaggaacttcatcccagaatcgatccagatatcatcaggagtagtgccctgatacagccctgcaggtaattccttactgaggccctcacgtcagctactggatgactgataagtgctctatacaacatctgaaggaatttgaattctgaaacacacctagcgtgcttagatcaaaacaagaaatctcacatgtaaattactgccgtttcctttctatggctgtaccactatataccttgagaccgcaagtccgcaactacgaagataactcattttccccttccttgttgccatgaacagaacagattatatgattctcctgccttttctgttgagaggaaaatgacctggccttttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0409500, RefSeq:Os04g0409500