Os04g0413600

From RiceWiki
Revision as of 11:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0413600| Description = Similar to 40S ribosomal protein S14 (Clone MCH2)| Version = NM_001059284.1 GI:115458297 GeneID:4335791| Length = 32...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0413600

Description

Similar to 40S ribosomal protein S14 (Clone MCH2)

Version

NM_001059284.1 GI:115458297 GeneID:4335791

Length

3226 bp

Definition

Oryza sativa Japonica Group Os04g0413600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20454838..20458063

Sequence Coding Region

20455005..20455072,20455536..20455665,20455738..20455823,20457587..20457632,20457741..20457863
,20457975..20457977

Expression

GEO Profiles:Os04g0413600

Genome Context

<gbrowseImage1> name=NC_008397:20454838..20458063 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20454838..20458063 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccgggaggaagaagacgcgagagcccaaggaggagaacgtgacgctcggccccacggtccgcgagggcgagtacgtcttcggcgtcgcgcacatcttcgcgtcgttcaacgacaccttcatccacgtgacggatctgtccggcagggagacgctcgtccgcatcaccggtggcatgaaggtgaaagctgaccgtgatgagtcatccccttatgctgccatgcttgcatcccaggatgttgcacagagatgcaaggagcttggaattactgctctgcacattaagctccgtgctactggtggaaacaagacaaaaactcctggtcctggtgctcaatctgcgcttagagctcttgcacgttctggcatgaagattggacgcattgaggatgttactccagtcccaactgacagtacccgcagaaagggtggcagaagaggaaggaggctgtaa</cdnaseq>

Protein Sequence

<aaseq>MSGRKKTREPKEENVTLGPTVREGEYVFGVAHIFASFNDTFIHV TDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGG NKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL</aaseq>

Gene Sequence

<dnaseqindica>2992..3059#2399..2528#2241..2326#432..477#201..323#87..89#acacctcctgccggtctcctccgaaccctagcctgcttctcctcctcctccccgccgccgccgccgcgagcacagacgacgcagccatggtaatgcatcccatttctgatctacgcttctccggcgtattgcctattcgaaggtctcgtttgctcaccgggaatgcgtgccgccgccgccgctgtttgtgcttggtgcagtccgggaggaagaagacgcgagagcccaaggaggagaacgtgacgctcggccccacggtccgcgagggcgagtacgtcttcggcgtcgcgcacatcttcgcgtcgttcaacgacaccttcatcgtgagatcccgagacctttgtttctgtttttgcgcctaatttatgttaaggcgtggtgtgttgtgctcgttgctatggcggtctcatacttgggtttcgtccttgcagcacgtgacggatctgtccggcagggagacgctcgtccgcatcaccggtaatttccctacttgagaacaatgcttattattgttaaagtttagtgtatttttgggccaatcgcattgtgaagtttattaatctactactatcgaatgagtgaattggaatggtgctgttgttgcatctaacagcggtaatataatacattgtagtagtcaatagaaatgtgtggctgttatgtatcgcggctgctgggtaaatcgaggttaagttcttatgggcatgtttccaagcagagcaggttaagctagcaaaatgttatttgtttgaccctcagattgatttgatcgaatgaaaacatgttactttcgactgacctggtcatttggccagttgtgttttattatggtatatgttccatgttcaacatctgtgatgtttgttataaacatccatcatgcattgttgttcagagataggagtatattctattgtaaaaaaatgtattgaagcagaggataatcatgcatgttaactgcatatgaattgatctttccttttggttactggccatgcaattgtctcataagtgtggccattgaggtcgcctacgttttgtcatttgtgagcgtgtagaagtcatatctgcgcaacgtgttgcattgcttctgttcagttgtttgcattgcaaacccttgcacaatgaattgttgtgtttgaggtgaatacactctatgttggagtaagcctcaggaagccttatttatactaagtcctaattgcccaattcaatttcgcatggattgggggggtcagcatcccagctgacatcgggttcaccaaggatcttcagtgctctcacagttttcagcaaagttggctgcaacctccatgtagactgtctagccacatctgttctttaatctgtttggttgttgactttattattttatttgttagcatggcccttaagatcgcctcccttttgttctgtgggagcgtgtcgagtcatagccatgcaagattaacaatgatggacctgagagtttttctctggaacttcttctcttcccgcttgttcgtcaggtgtttccattgtggcattgggtttcctgtggtgtttggttagtatggagcctctgctttctgcattgctcctgctgagtccttcattcttgcaactctttgccacttaaaaatggaggtttctacatgttggaagggaacatgtcatattattttacaactgcttctctttttgtttgaagattttttgtgtattagctgtgcaattttccataccttttagttgctatgaatttataattatggagttatgaatttataattatggagttatctgaagtttctcactggatgcagctcactgcccatttgttttagggtgttaatattttttaatcttcgttgggttttggcatgagaattcattggtcacaagtttttttttatcttagaaccacttgttatatcttgctaggattcataatgtaattagtttctttcagtaattgaggacggtgcatcaatattgaaccagttgtatatataacgtaatcgcgtttatgtttatagatgcctataaaattgtgattttatgcatttttatgatccatggttgtcttgccattttgtatgctctgagatcagtaagatgttgatgttctatataattcatggttcatcagaccatttgaaatcttattcaaactacgtgcaaatgctttgatccagttttttttaaaaggaatatcttgtagatctctgctgttatagttacaaaattgtattttgcaggtggcatgaaggtgaaagctgaccgtgatgagtcatccccttatgctgccatgcttgcatcccaggatgttgcacagagatgcaaggtacaaaaatacctactgaaacattaattgtctgctgtcagttgatacttactgttttgttgccctgtacaggagcttggaattactgctctgcacattaagctccgtgctactggtggaaacaagacaaaaactcctggtcctggtgctcaatctgcgcttagagctcttgcacgttctggcatgaagattggacgcattggtaatcttatagtccccattaatttccttgcaccattggcaccttggtggttatctagcatttgttattattaattgtgtttgactatttttgtggaaatttatcctagagttgctaacggactgcgcattgtaatgcatgggtttttttggttatactactgtttataattcaatttcttatactattgtttgacatacatagtatctagaatagaatggctgtacatttaatttagccttgtaactagtatggttgatgctgaacctgtgctagctttttgttgttgaaaagatggctttgtttaccttttatctactcgttatgctcagtgcttagctactcagtgttaatcagcctcctaagttatttttacaattattgtcaggttgaacttacaaccatttccctcacgatttctgtgaagaattaatcttatttctgttcttaatttgtgaaacagaggatgttactccagtcccaactgacagtacccgcagaaagggtggcagaagaggaaggaggctgtaattccgtgtagtgcctgttatggggggaaagcaaagctatctatccttgtccttgcaacttgttctgtactctattatgatcttagcatcggatgtggatttataaattttgagctatgttatgttctttagaagatgaatgacctccccctataaagccgattatct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0413600, RefSeq:Os04g0413600