Os04g0418500

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Revision as of 11:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0418500| Description = U box domain containing protein| Version = NM_001059307.1 GI:115458343 GeneID:4335817| Length = 1652 bp| Definition...")
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Gene Name

Os04g0418500

Description

U box domain containing protein

Version

NM_001059307.1 GI:115458343 GeneID:4335817

Length

1652 bp

Definition

Oryza sativa Japonica Group Os04g0418500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20713175..20714826

Sequence Coding Region

20713230..20714585

Expression

GEO Profiles:Os04g0418500

Genome Context

<gbrowseImage1> name=NC_008397:20713175..20714826 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20713175..20714826 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaggaaggaatcgtcgacgacgacgacgacgacggcggcggcggcggcggcggcgacgaggagcatgaggctgccgccgcagcaccaggcgctggaggtgaagatcccgagcttcttccggtgccccatctccctcgacgtgatgcgctccccggtcagcctctgcaccggcgtcacctacgaccgcgcctccatccagcgatggctcgactccggcaacaccacctgccccgccaccatgctccccctcccttccaccgacctcgtccccaacctcaccctccgcagcctcatctcccactggtcctcctcctcccccgccacctccggcgatgcctctgtcacttcttcccccgcgggccttgtccgccaggtcgcgtcgcccgacgccgacccttccgcggcgctgcgccagctcgcggcgtacctctcggacgacgacgtcgacgagttcgagaagaacgcgctggtgggcgccggtggcgccgccgaggccgtggcctcggtgctccggaggaagggcgagcgggaggtcggcgtggaagggtgcgaggcggcggtgcgggtgctcgccgcggtcgtcgcgatggatggagtcgaggacgcgaacaagaggcgggtcgccgccgggctcgccgcggacgccgcggcgtcggcggcgtccctggcgcgcgtgatgcgcggagcgagcgggctggaggcgagggtcgacgcggcgaggctggtggagttcctgctcgccaatgccgccgacgaggcgagggaggcggtggccgagtcggccgagctcgtcgccgagctggtgcggctcgtcggccccgccgacgagaaggggagcctcgacgcgagggccgtcggcgcgggcctctcctgcctcgccaccatctcccggtcgcgccgcgccgcgcgcgccgagatggtccgcgccggcaccgtccgcgccgcggcgcgcgcgctgcgcgccacggcggcggacccggccgcgtccgccagggcgctccgggtcctcgagtccgccgtcggctgcgccgagggccgcgccgcgctctgcgaggacgccgagcaggccgtacccgcggtggtgggcaggatgatgaaggccggccgcgacggcgccgaggccgcggaggccgtgctatgggcggtctgccacaagtacagggaccggcgcgacgccgacgccgcggaggcgtcggagggcggcctgactcgcctcctcctgctgctgcagagcgggtgctcgccggcggcgaggcagatggcgctcgagctgctcaagatttacaaggtgaacgccaagagctgcctcgccggctacgactccaagaccacccacatcatgccgttctga</cdnaseq>

Protein Sequence

<aaseq>MGRKESSTTTTTTAAAAAAATRSMRLPPQHQALEVKIPSFFRCP ISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLTLRSLISH WSSSSPATSGDASVTSSPAGLVRQVASPDADPSAALRQLAAYLSDDDVDEFEKNALVG AGGAAEAVASVLRRKGEREVGVEGCEAAVRVLAAVVAMDGVEDANKRRVAAGLAADAA ASAASLARVMRGASGLEARVDAARLVEFLLANAADEAREAVAESAELVAELVRLVGPA DEKGSLDARAVGAGLSCLATISRSRRAARAEMVRAGTVRAAARALRATAADPAASARA LRVLESAVGCAEGRAALCEDAEQAVPAVVGRMMKAGRDGAEAAEAVLWAVCHKYRDRR DADAAEASEGGLTRLLLLLQSGCSPAARQMALELLKIYKVNAKSCLAGYDSKTTHIMP F</aaseq>

Gene Sequence

<dnaseqindica>56..1411#acttccatttccaagaatcgaacggaggcgtctcgctatcgccatcgccatcgccatgggcaggaaggaatcgtcgacgacgacgacgacgacggcggcggcggcggcggcggcgacgaggagcatgaggctgccgccgcagcaccaggcgctggaggtgaagatcccgagcttcttccggtgccccatctccctcgacgtgatgcgctccccggtcagcctctgcaccggcgtcacctacgaccgcgcctccatccagcgatggctcgactccggcaacaccacctgccccgccaccatgctccccctcccttccaccgacctcgtccccaacctcaccctccgcagcctcatctcccactggtcctcctcctcccccgccacctccggcgatgcctctgtcacttcttcccccgcgggccttgtccgccaggtcgcgtcgcccgacgccgacccttccgcggcgctgcgccagctcgcggcgtacctctcggacgacgacgtcgacgagttcgagaagaacgcgctggtgggcgccggtggcgccgccgaggccgtggcctcggtgctccggaggaagggcgagcgggaggtcggcgtggaagggtgcgaggcggcggtgcgggtgctcgccgcggtcgtcgcgatggatggagtcgaggacgcgaacaagaggcgggtcgccgccgggctcgccgcggacgccgcggcgtcggcggcgtccctggcgcgcgtgatgcgcggagcgagcgggctggaggcgagggtcgacgcggcgaggctggtggagttcctgctcgccaatgccgccgacgaggcgagggaggcggtggccgagtcggccgagctcgtcgccgagctggtgcggctcgtcggccccgccgacgagaaggggagcctcgacgcgagggccgtcggcgcgggcctctcctgcctcgccaccatctcccggtcgcgccgcgccgcgcgcgccgagatggtccgcgccggcaccgtccgcgccgcggcgcgcgcgctgcgcgccacggcggcggacccggccgcgtccgccagggcgctccgggtcctcgagtccgccgtcggctgcgccgagggccgcgccgcgctctgcgaggacgccgagcaggccgtacccgcggtggtgggcaggatgatgaaggccggccgcgacggcgccgaggccgcggaggccgtgctatgggcggtctgccacaagtacagggaccggcgcgacgccgacgccgcggaggcgtcggagggcggcctgactcgcctcctcctgctgctgcagagcgggtgctcgccggcggcgaggcagatggcgctcgagctgctcaagatttacaaggtgaacgccaagagctgcctcgccggctacgactccaagaccacccacatcatgccgttctgaactgaaaaatcgaagcttttggtcagggccatcatggaacaggagatcaaccttcgtgttccgttcttttctttcttttcttcttttgttcttttctaaatgtaatttgatgatagagaaaacaggaggagatcgaattgatttgtggagggaagaagaaaaaaataatctgtacatgtgtagcgagagttttgataggaaaagaaaaatcaatgggaaattaaccgatgagttgttgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0418500, RefSeq:Os04g0418500