Os04g0422600

From RiceWiki
Revision as of 11:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0422600| Description = Protein of unknown function DUF6, transmembrane domain containing protein| Version = NM_001059326.1 GI:115458381 Gene...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0422600

Description

Protein of unknown function DUF6, transmembrane domain containing protein

Version

NM_001059326.1 GI:115458381 GeneID:4335838

Length

5295 bp

Definition

Oryza sativa Japonica Group Os04g0422600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20919875..20925169

Sequence Coding Region

20923905..20924204,20924304..20924462,20924568..20924719,20924826..20924970

Expression

GEO Profiles:Os04g0422600

Genome Context

<gbrowseImage1> name=NC_008397:20919875..20925169 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20919875..20925169 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tttttaagggttaacattagtttccatactgaacaaaacaacaggctcgagaccttaaaacttaagaaacctgctggacaagcaaaacttctaggaacacttgtaggcatgggtggtgcaatgttgcttacattctacaagggaccaaagatcatggtactcgaccaacttccccatcccaaatttgcccacctcactgaaaatccccagtcgcacccaatatcgacgggcaatcaaattataggatcgttccttggtataatcagctgtttcacctacgcgacatggctagtcatccaggcgaaagtgagcaaggtttacccgtgccactactcgatcgctgcaatggtgtgcctcttcggcgcacttcagtccacggtaatggcactttgtgttcacagggacatggagcattggaggttaggacttaacatcaggctctactcatcggcttacgcgggactcatagcatcaggctccgcgttccctctgctgtcgtggtgcctgcggaagaaaggccccctgttcatctccgtgttcagcccgctgatgctcatcttcgtcgcgctgatgagctcgatcattctcaatgaggcgttgcacctcggaagtgtgcttggttctgtcctgattgtgggtggcttgtacatggtgctgtggggcaaagcgaaagaggcggctgatctgtctgaagatgaaaatcagggcaaggaatccatccctgtgaccactggcggtgagaatgaaatgaagtga</cdnaseq>

Protein Sequence

<aaseq>FLRVNISFHTEQNNRLETLKLKKPAGQAKLLGTLVGMGGAMLLT FYKGPKIMVLDQLPHPKFAHLTENPQSHPISTGNQIIGSFLGIISCFTYATWLVIQAK VSKVYPCHYSIAAMVCLFGALQSTVMALCVHRDMEHWRLGLNIRLYSSAYAGLIASGS AFPLLSWCLRKKGPLFISVFSPLMLIFVALMSSIILNEALHLGSVLGSVLIVGGLYMV LWGKAKEAADLSEDENQGKESIPVTTGGENEMK</aaseq>

Gene Sequence

<dnaseqindica>4031..4330#4430..4588#4694..4845#4952..5096#acggcttggctttgcctactactgctgctgctgctctgctctctcctctctctcgtgagcaagcgtagtagcctcgctctctctcgcagccgcgcgcttggtgggagggggggattggggatgatggggagcgagtcggggagggcggtggcggcgatggtgtcgctgcagctgctcttctcggcgctgcaggtcttcatcaagctggcgctcaacgacggcatggacgcccgcgtcctcgtcgcctaccgcttcatgttcgccgccaccttcctctgccccatcgccttcctccgagagaggtcaggtcacatcccatatactactatgcccccactgtcctaacctgctttcttgctcttgttcttctgggggaaaaaagctcgaattaataccggaatgcatgtgcatgctctgtagtgtatctgtgtatacttgatgattgttagtatttgataatctcatgtctcacatgattattagtgctttcgtttacttgatcgatgatcatgggcttattgaagtttagttacagtgcacttgacgtctcagagtagactaagcttggttaacgatcaagggtttttttaagttttcttctattcttgttcataaatgtatttttctttcttctttatgtactattagttacgtgcatgtagttccaaataaaagggctagctcttagacgtatctcaactagatcgatctggccttgctgaaaaaccaagcgaactaagattttatctaaaagttcgggtgaattgatctctccatgtcaaatatccaagtgatctttacggggcttgcttccttaatttgtactctgctttcttgtatacttgtaccaactatcttacaatttatagtcacctgcaattttcttatctttcttctgtctaattttgcacatcacttatccttagttgcagtgctgattaagtagtatgcaatttttgctgtctttgttgcaattttagtttgtgtctaaagagatccaactaggttttcttaacgttttctgcatcatgtaaggggttcaacaatccatttctaggcctaaatatataattcatgctgatctcatcactaacaaacatattatctgagttgttggctgttaatgtggtagttgaaaatgatgagtggttgaaaattatgactagctatactgaagtagtaaagcaaacatttttctttctttttttatcatcctgcggaataagaatgaaggaaaagaaaccattttagaaattctatatgtaacatataaaccactccaagattaatagaacattgagtaatcatgtatttgacttttacatggcgagttaaaggcacattgcacctaacgacttttatttgtttgttagattctgcaattagtaatgataaatgttctgttgttcaggaagaaacgaccgcctctaaccatgaaggtggtgctgcaactattcttgtgcgggttgtttgggtaagtacttgctattataattcctaagttaaactcttatttcagaagttatctttttgtacaaacaggtcaatatccccccccctctttttttttgcttgtaattgcctctaactgatgtttttcaacacaactacatgttaattcaaagcttctttattagaagctctgtcatgttgaaggtatataaaagaaaagtcatgctgattgatcagaaacagatattgaatatatatgagtgttcacttttccttctttatgtttccatgaaaaaaataaattatgtgttgtgcattggtgaaaggcacttgcttcatgttaatccagttattagccttactgtgtaagtagtagtagaacaatgaatgtttatcatttgacagcagtgtgcccccaattcaccatatactgcatcacaacttatatggtatatcaactcttaaatatttcttggtactccgtaaatatttttccagtgattctgataaccaaagttcaaatgcagagttccataaacatttgtgtaaaatggatatattagtagtcaggaggttcagggtctatgttcatatttccttggtactcgctatatatttgactaggagccaaatgaagatcttacactatgtcaaaaattgagtagccgagttgcctcaacaatttcatccagatgtaaaatcttgaaacaaacgaaagaaatttataaactacaccaagaataataaaacttgaaaattacttccttcaaaataaatgatgcatttaccaatttttttttctgtattagatgtgttgaccacaataacttttgtgtccaactgcatacacaaggatcatgttgatctcgaagccgtcacctgagaataactagatgacatggcacacgttgcagcaggaatttttgtgccacggcaggaatttttttgcattgcataaagtgcgatggttacatgaaattggaactaaagcaaaaaagtataaccttttagaggaatagaataaaggaaatggggatttttgttaggtacaaacaaccaagaggttgtataactgctaaatctggacacaaagtgaaaatcacatatagaaaacaaaaaatgaagttacttaccttcattgatcaagaattatcctaacaaaatatatgcaggcatgtagcaaaatgaataagtccactagcacggactatgaaagaccttgatcagatcggtggtattgggctgtctaaagacgaggcttgaggggattaatccaatggtgaaattcttatggtgacgtggcttcatgtggtgcttgttttataacaataaatgacttgtagtgggtaccaattatataggtagtaaggataggcccgcacaacacatcacaattagtttcccttctaaattccataggaattgccatactctgactacccatgaatcgtgttgaattcacaattcacatggtacgcacaggttgtcatgaagatggtaattgctggacacactcatcaatttaggggcatcatactacaacttgtgctctactaacactagatttcagcaaaggttggtatacgcattcactccctgggaaattttggttgttacatatggccttcgattacatgtttatgtttcaaccaatcaattagtagaccactggcttacattttgaagctatatcgaaacgaaacaagcttaacattgtttctcatgcctaaatggcccaatagaccttcctaaagcctgagcacctagttatgtccttgacaacctggctagattgcctaattgggataggcatagtcaaggcaaactgttatcacagaaaaaaactttggttaattcaaaatatctccgaatgtggaagggtccctttgttgtgcaatatccttcatcttgaatggcattacttacctttcaatgtttgtgatttccaataatttagtgtagtactcattatatttaggaatttaaagcttcctgttgctcaaccgaaaactcatcgaacatctttagtacagtaaaagtgcatgagatcctctgtgcaatcagtgtggaacacaaatattgaggatgatattaaccatggcttggtagtttttctttctttctcttatgtagattactctggataatatgtgctacttacagattttctttctttctcttatgtagatgactgtttttctgattacacacttgcagattttctataaaccagaatctctatgtgcttgctataaagttgacttcagcaacatttattactgctatcagcaacctgacaccagcaaccaccttccttcttgctatattgaccaggttacggatttaccacttatagcttatatgtttaatttcaaggcatacagagatactccagcttatatctctgactatttctgtctaatattatcacctttgaatatatattacttcaagaactggctaaaagtatgttgaatttcaactacaacagttatgtaggagtattctttcagcagccagaacagtttatattttccgtcttatttgtaaaaaaaatatggatataacaaagccataatttttaagggttaacattagtttccatactgaacaaaacaacaggctcgagaccttaaaacttaagaaacctgctggacaagcaaaacttctaggaacacttgtaggcatgggtggtgcaatgttgcttacattctacaagggaccaaagatcatggtactcgaccaacttccccatcccaaatttgcccacctcactgaaaatccccagtcgcacccaatatcgacgggcaatcaaattataggatcgttccttggtataatcagctgtttcacctacgcgacatggctagtcatccaggtcataatcttacacttagtttcttctttcaacagtgcgcccactcaactgttgcagttctaatgtttggtattgatgcattttttttgccatttacaggcgaaagtgagcaaggtttacccgtgccactactcgatcgctgcaatggtgtgcctcttcggcgcacttcagtccacggtaatggcactttgtgttcacagggacatggagcattggaggttaggacttaacatcaggctctactcatcggcttacgcggtacgcggttcatccggcatttcatatttttcatggtaacagcatgatcgatccttacatttgttccgagtctaatgaggttagcacccttgttgattcaaccagggactcatagcatcaggctccgcgttccctctgctgtcgtggtgcctgcggaagaaaggccccctgttcatctccgtgttcagcccgctgatgctcatcttcgtcgcgctgatgagctcgatcattctcaatgaggcgttgcacctcggaaggtgatggccaccatttcctttctggattcatgcattgcagttcaatgtgtaatgtggacaccaattttctcatggcgagttcttgtgttgttctgctgtaatgcagtgtgcttggttctgtcctgattgtgggtggcttgtacatggtgctgtggggcaaagcgaaagaggcggctgatctgtctgaagatgaaaatcagggcaaggaatccatccctgtgaccactggcggtgagaatgaaatgaagtgaagagagcattgggcctacaggttgctatttgacagaaatgacagaaagatatgattctgaaattctgatagaaatatagaatgttcggtttggatcaggcattgatgtttctacatcgattcatctcgtgtattgtggacgctatcatttgtctgaatagtctgatactgttaatctgttattgccgtggatttgctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0422600, RefSeq:Os04g0422600