Os04g0438500

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Revision as of 11:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0438500| Description = Conserved hypothetical protein| Version = NM_001059399.1 GI:115458527 GeneID:4335919| Length = 2395 bp| Definition ...")
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Gene Name

Os04g0438500

Description

Conserved hypothetical protein

Version

NM_001059399.1 GI:115458527 GeneID:4335919

Length

2395 bp

Definition

Oryza sativa Japonica Group Os04g0438500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21821451..21823845

Sequence Coding Region

21821741..21822061,21822210..21822334,21822934..21823513

Expression

GEO Profiles:Os04g0438500

Genome Context

<gbrowseImage1> name=NC_008397:21821451..21823845 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:21821451..21823845 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacagccagggattcggtccgggcgggagccccaagtcgttccgctaccctagggcggacttcgatctcgagtccgggatcgcccgcaagggcttacgcaagcccaagaaccacgacgcccccggtttgctcacctccacgctgatgaagatccggtacttctacgaggcgcaccccgtcgcggtcgccttcatcctgctgtccttcgggctcagcgtgctgatcctcctgtcggtgtacgagacccggttcaggatgatgcggggttcttcgggtgaggtcggggagtatccgctcccggagctccgcaaccttgtgatggtggccgggcattcgatttacacgagcgagagctgcgggaagattgatcgcgaggactcttggttcttggagccgtatcagaagcaccccggtcaggcggccacgttcttggcgcatatcaaggaaggcgtgggtatcgccgcgagggatgagaaggcgcttctgctgttcagcggcggcgagacgaggaaagatgcggggccgaggagcgaggctcagagctactggactatcgcggattcgaaaggctggtttggaaatgatgaaagtgtaaggagacgggcactcaccgaggagcatgcacgtgatagttttgaaaacctcctatttagcgtttgccggtttagagaactcactggaagttacccgcaaaatataactgttgtaagctatgattttaaggaggaaaggtttgcgcaattgcacagatctgctcttggattccctgaagggagattcttcttcttaggtacccctgctacactgactgcaagggagtctgctgtcaagggtgaagccgctgttagatctcagttccaggaagatccttatggatgcttaggttctcttcatatgaagaggcttaagagggatccatttcaccgtgccattccatatccgaatggttgccctgagctgaagggtctgttctcatactgtggtctggtgccttaccctgggcagcttccttggacccaatag</cdnaseq>

Protein Sequence

<aaseq>MNSQGFGPGGSPKSFRYPRADFDLESGIARKGLRKPKNHDAPGL LTSTLMKIRYFYEAHPVAVAFILLSFGLSVLILLSVYETRFRMMRGSSGEVGEYPLPE LRNLVMVAGHSIYTSESCGKIDREDSWFLEPYQKHPGQAATFLAHIKEGVGIAARDEK ALLLFSGGETRKDAGPRSEAQSYWTIADSKGWFGNDESVRRRALTEEHARDSFENLLF SVCRFRELTGSYPQNITVVSYDFKEERFAQLHRSALGFPEGRFFFLGTPATLTARESA VKGEAAVRSQFQEDPYGCLGSLHMKRLKRDPFHRAIPYPNGCPELKGLFSYCGLVPYP GQLPWTQ</aaseq>

Gene Sequence

<dnaseqindica>1785..2105#1512..1636#333..912#gtttcctctcctcgcctctgctctcttcccccgttaaggcaggcgatcctgatcccctctccatccgccggcggccgacgcgggggcgcggaggcgcgcacgcacgcacggcggtgtggacggctcctctccttgccggagcccggcctccttccctgtgcggcctcctcgccccgccggcgagcctctctgctcgaatcgaaccggaggtataccccattcctgcctcgtagccctctctctccctccctccctccctcgctccggcgccgcttcatgcgccggcgagacctggatcgggaggaagactcggatcgagccggtggggcgcgatgaacagccagggattcggtccgggcgggagccccaagtcgttccgctaccctagggcggacttcgatctcgagtccgggatcgcccgcaagggcttacgcaagcccaagaaccacgacgcccccggtttgctcacctccacgctgatgaagatccggtacttctacgaggcgcaccccgtcgcggtcgccttcatcctgctgtccttcgggctcagcgtgctgatcctcctgtcggtgtacgagacccggttcaggatgatgcggggttcttcgggtgaggtcggggagtatccgctcccggagctccgcaaccttgtgatggtggccgggcattcgatttacacgagcgagagctgcgggaagattgatcgcgaggactcttggttcttggagccgtatcagaagcaccccggtcaggcggccacgttcttggcgcatatcaaggaaggcgtgggtatcgccgcgagggatgagaaggcgcttctgctgttcagcggcggcgagacgaggaaagatgcggggccgaggagcgaggctcagagctactggactatcgcggattcgaaaggctggtttggtgagtttggctgctttaatggttttcatcgggtcgccgcaatactagttttattgacacactggaatttgaaactgcattgccaattgttcttttgcttattggtctaatcatagcattgttagatgtacaattagatattagttctaaccactaaattctcagttgctctgaaaaagagcaaaacaatcataattcttttcaatgagtaaaggacttacatttatgtttagacacatatgcgtgggaacatatatataaaagccttaacaaagaaatgccgtgctaatgctttggaagtgggaaataaaaaaggaaatagtttattcatattttctgcaggtcactgagcaattccttgaaacttagaattctctggttatgataaaaataaagtttcagtgtatgagtatagaatctcaggaagatggataatgaaaatatatatgctcatataagtaaatgatctctgaagttgatggtatttacttattggagtgtagtaatattagcatcaaattgaatttgctatcactgatgactaaacgacttaatgactatcctctgtaactacttatagtttgcttgtatatgcacaggaaatgatgaaagtgtaaggagacgggcactcaccgaggagcatgcacgtgatagttttgaaaacctcctatttagcgtttgccggtttagagaactcactggaagttacccgcaaaatataactgtaagatttcttgtcttgctatactttgttctcaaaacctcctattaggatttatcattacgcaattagtaaccctgttggctggattatgtatttcaaacttattgatgccattcactaatctgcatctcaacatttcttttcttaggttgtaagctatgattttaaggaggaaaggtttgcgcaattgcacagatctgctcttggattccctgaagggagattcttcttcttaggtacccctgctacactgactgcaagggagtctgctgtcaagggtgaagccgctgttagatctcagttccaggaagatccttatggatgcttaggttctcttcatatgaagaggcttaagagggatccatttcaccgtgccattccatatccgaatggttgccctgagctgaagggtctgttctcatactgtggtctggtgccttaccctgggcagcttccttggacccaatagctcgaaggatatacgaaccttggactatacaaccttctttcattgcctcggctctgaagtctgaactgacaaaataactacttgtgaaatgtgatgtattcttcctgaatcctgactaagaccacatttacattagtgagattgtttttttgtaacggtgtatatcacatgatcaatatatgttttttcagtgtgatttggcatctctgtactaggaaacttgaaattattagtgaaaacaatgttctctctctgtttttttttaaagataaatgttctcaatctactgg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0438500, RefSeq:Os04g0438500