Os04g0439200

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Revision as of 11:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0439200| Description = T-complex 11 family protein| Version = NM_001059403.1 GI:115458535 GeneID:4335923| Length = 2835 bp| Definition = O...")
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Gene Name

Os04g0439200

Description

T-complex 11 family protein

Version

NM_001059403.1 GI:115458535 GeneID:4335923

Length

2835 bp

Definition

Oryza sativa Japonica Group Os04g0439200, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21875702..21878536

Sequence Coding Region

21875702..21876922,21877029..21877256,21877350..21877580,21877684..21877946,21878065..21878536

Expression

GEO Profiles:Os04g0439200

Genome Context

<gbrowseImage1> name=NC_008397:21875702..21878536 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:21875702..21878536 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtggcggcgatggagctaccggcggtccgagcctacgacgccctggggatcaacgagacgtccgtcaaatccatgccgttcgaaaacctggccacgctgatgcagtctccggcgacgctccaggccaccaaggcggtgctcgaccggttcgagaaactcttgcctcttctttcatcgccggtcataaacatcgatcacctcctgaaacaccttggatctccaaagaagaagaagacaccaccacctgctgctgctgctagcgcgtctcgatactcgctgagggtagtcctctgctcctacatgatcctggctcatccgggtgcagtgttgagtggacaaggggagaaggagaagctacttatggattcagcaggaagctttgtcaaggagtttgagctattggttaagactgtgcttgagaagcaatcgactgatgctgctgccggtcagaaaatgttcagtgctcagctggccgatttcgatagagcatggtgcgcttacctctactgctttgtggtgtggaaactgaaggatgcgaaatcgctggaggacgatcttgtccgggctgcgtgcaagcttgagctgtcgatgatgcagacgtgcaagctaagttcagatgggcagtcacataatggcctctctcatgatatgaaggcgattcagaaacaggttgctgatgatcagaagctgttacgagagaaggttcatcaactgagtggcgatgcaggcatcgagcggatgaactctgctctttcggacacaaggtcaaagttctttgaggcgaaggagaacggaaacccattagctgcatcagttgcaaacgtatctactcctttgagcattggttcgtctggatcgagcttcactgcccaatctttgcctggagctgcttcatcgccaagcagttcatctctgatgaaacagccgacggacaatgagcaaatgctcaatgagatgcttcacgaggacgatgtttcttttggtggcaactctgataacgtcagttccgcggagaaggagtttcaggccaaagtgaaatcgacgatggagaaagcgttttgggatctggttactgattcgatgaaaggggacaaaccagattatacccaactaattaacctcgtgaaggaagtcagggattcattacatgagttggcttccaaggagttgaaggaggaaatcctcgagaacattgacctcgaaattttgtcacaggtgctcgagtcaggctcccaggacacgcgatatctggggcagattatgcactactccctggatatgatcaggaaactatctgcccctgcaaaggaagatgacatgaagaggagtcatgagaaattattgaacgagttggctgcaagttccgaagttaatgacaatggcatcagctcctttgtcattgctgtcatcaagggcctgcgtttcactctcgaagaaataaagcaactgcaatctgaagttagcaaggctcgcatccagctcatgcaaccaatcataaaaggctctgccggagtggagtacctgcagaaggctttcgcggatcgctatggacctcctgctaatgcatcagcgtctctccctataactaagcagtgggtttcggcaacgaagagcatcgtggaacaagagtggagctcacatttggagtctctccaagctttgccagcagatcatgctcaacgcgttgttgttccggcacttcgagctggtcacggtgctccaatggctcaggcttcttcgtccgcagctagcggttctggtctcccagaatgcaagggtgagaagatcgacaagctgacaagggttggcttgttgcaacttatcagcaatgtggagggcctgaacatgcagtcaacccctgagaccttccaaattaatctgccgaggttgagggctgtgcaagatcagtttcagaaggtgattgtgatcgcgacgagcattctcgtcctgcatcaagttctggtgtcgaaggtcgctgctccggagctgcagaacgccatctcggagctctacgacgctctcgtgaagctcctcgacagcaaccccgacgcttcgacggaggagatcgtggaggcgatggcgagctctctggcgacggtcggctctctctctctgccggagaagcaggctcaggccacggcggagctcgcgaccaagatgctcctcaagagcctccaggccggcgacgtcgtcttcggcaaggtgtcccgtacggtctactgcgcgttccgcggcgtcgtcctcggcggcggcggcgtcaagggcaagaagctggccgaagcgccgctgcgacgcctcgccgcggcgaagctcgccgacagggttgtcaaggccggggagatgctgataaatatggcagtcatatcagagaaggtccatggacaatggtacaaggcgcttgccttgtga</cdnaseq>

Protein Sequence

<aaseq>MAVAAMELPAVRAYDALGINETSVKSMPFENLATLMQSPATLQA TKAVLDRFEKLLPLLSSPVINIDHLLKHLGSPKKKKTPPPAAAASASRYSLRVVLCSY MILAHPGAVLSGQGEKEKLLMDSAGSFVKEFELLVKTVLEKQSTDAAAGQKMFSAQLA DFDRAWCAYLYCFVVWKLKDAKSLEDDLVRAACKLELSMMQTCKLSSDGQSHNGLSHD MKAIQKQVADDQKLLREKVHQLSGDAGIERMNSALSDTRSKFFEAKENGNPLAASVAN VSTPLSIGSSGSSFTAQSLPGAASSPSSSSLMKQPTDNEQMLNEMLHEDDVSFGGNSD NVSSAEKEFQAKVKSTMEKAFWDLVTDSMKGDKPDYTQLINLVKEVRDSLHELASKEL KEEILENIDLEILSQVLESGSQDTRYLGQIMHYSLDMIRKLSAPAKEDDMKRSHEKLL NELAASSEVNDNGISSFVIAVIKGLRFTLEEIKQLQSEVSKARIQLMQPIIKGSAGVE YLQKAFADRYGPPANASASLPITKQWVSATKSIVEQEWSSHLESLQALPADHAQRVVV PALRAGHGAPMAQASSSAASGSGLPECKGEKIDKLTRVGLLQLISNVEGLNMQSTPET FQINLPRLRAVQDQFQKVIVIATSILVLHQVLVSKVAAPELQNAISELYDALVKLLDS NPDASTEEIVEAMASSLATVGSLSLPEKQAQATAELATKMLLKSLQAGDVVFGKVSRT VYCAFRGVVLGGGGVKGKKLAEAPLRRLAAAKLADRVVKAGEMLINMAVISEKVHGQW YKALAL</aaseq>

Gene Sequence

<dnaseqindica>1..1221#1328..1555#1649..1879#1983..2245#2364..2835#atggcggtggcggcgatggagctaccggcggtccgagcctacgacgccctggggatcaacgagacgtccgtcaaatccatgccgttcgaaaacctggccacgctgatgcagtctccggcgacgctccaggccaccaaggcggtgctcgaccggttcgagaaactcttgcctcttctttcatcgccggtcataaacatcgatcacctcctgaaacaccttggatctccaaagaagaagaagacaccaccacctgctgctgctgctagcgcgtctcgatactcgctgagggtagtcctctgctcctacatgatcctggctcatccgggtgcagtgttgagtggacaaggggagaaggagaagctacttatggattcagcaggaagctttgtcaaggagtttgagctattggttaagactgtgcttgagaagcaatcgactgatgctgctgccggtcagaaaatgttcagtgctcagctggccgatttcgatagagcatggtgcgcttacctctactgctttgtggtgtggaaactgaaggatgcgaaatcgctggaggacgatcttgtccgggctgcgtgcaagcttgagctgtcgatgatgcagacgtgcaagctaagttcagatgggcagtcacataatggcctctctcatgatatgaaggcgattcagaaacaggttgctgatgatcagaagctgttacgagagaaggttcatcaactgagtggcgatgcaggcatcgagcggatgaactctgctctttcggacacaaggtcaaagttctttgaggcgaaggagaacggaaacccattagctgcatcagttgcaaacgtatctactcctttgagcattggttcgtctggatcgagcttcactgcccaatctttgcctggagctgcttcatcgccaagcagttcatctctgatgaaacagccgacggacaatgagcaaatgctcaatgagatgcttcacgaggacgatgtttcttttggtggcaactctgataacgtcagttccgcggagaaggagtttcaggccaaagtgaaatcgacgatggagaaagcgttttgggatctggttactgattcgatgaaaggggacaaaccagattatacccaactaattaacctcgtgaaggaagtcagggattcattacatgagttggcttccaaggagttgaaggaggaaatcctcgagaacattgacctcgaaattttgtcacaggtaaggaatcggtggtcttgacaaaataaaatagttagtattaatttgcttttgttaaacccagtatattttgaattaatgttgttattttttttttggatgaaaggtgctcgagtcaggctcccaggacacgcgatatctggggcagattatgcactactccctggatatgatcaggaaactatctgcccctgcaaaggaagatgacatgaagaggagtcatgagaaattattgaacgagttggctgcaagttccgaagttaatgacaatggcatcagctcctttgtcattgctgtcatcaagggcctgcgtttcactctcgaagaaataaaggtttgttcaatgttaacaccttgacttagtcctgacatagattgcacttactttgcgccgtgttttcctaacattttttctgtgatttaacagcaactgcaatctgaagttagcaaggctcgcatccagctcatgcaaccaatcataaaaggctctgccggagtggagtacctgcagaaggctttcgcggatcgctatggacctcctgctaatgcatcagcgtctctccctataactaagcagtgggtttcggcaacgaagagcatcgtggaacaagagtggagctcacatttggagtctctccaagctttgccagcagatcatgtaagtctctctacgatcacaacaatttttacggttgtattagcataggcagcagtcttaagtttttctctgactgacactgaattttaacccgtcttgtcaggctcaacgcgttgttgttccggcacttcgagctggtcacggtgctccaatggctcaggcttcttcgtccgcagctagcggttctggtctcccagaatgcaagggtgagaagatcgacaagctgacaagggttggcttgttgcaacttatcagcaatgtggagggcctgaacatgcagtcaacccctgagaccttccaaattaatctgccgaggttgagggctgtgcaagatcagtttcagaaggtgattgtgatcgcgacgaggtaaataaatattctccaccttgaacttttgaactaaatctgtcgattcagaacaactgatttttatacttgatgcatgtgataactgaaatcaatctaccatgtctgtctgttccagcattctcgtcctgcatcaagttctggtgtcgaaggtcgctgctccggagctgcagaacgccatctcggagctctacgacgctctcgtgaagctcctcgacagcaaccccgacgcttcgacggaggagatcgtggaggcgatggcgagctctctggcgacggtcggctctctctctctgccggagaagcaggctcaggccacggcggagctcgcgaccaagatgctcctcaagagcctccaggccggcgacgtcgtcttcggcaaggtgtcccgtacggtctactgcgcgttccgcggcgtcgtcctcggcggcggcggcgtcaagggcaagaagctggccgaagcgccgctgcgacgcctcgccgcggcgaagctcgccgacagggttgtcaaggccggggagatgctgataaatatggcagtcatatcagagaaggtccatggacaatggtacaaggcgcttgccttgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0439200, RefSeq:Os04g0439200

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os04g0439200&oldid=16106"