Os04g0439600

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Revision as of 11:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0439600| Description = Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein| Version = NM_0010...")
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Gene Name

Os04g0439600

Description

Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein

Version

NM_001059405.1 GI:115458539 GeneID:4335925

Length

2844 bp

Definition

Oryza sativa Japonica Group Os04g0439600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21901158..21904001

Sequence Coding Region

21901438..21903906

Expression

GEO Profiles:Os04g0439600

Genome Context

<gbrowseImage1> name=NC_008397:21901158..21904001 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:21901158..21904001 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctccacctcacctcctcctcctcctcctagccctcctcctctcgccgcccctcctcctcgcctcctcctccttccccctccccaccatcgccatcgccgccgtctccaactccagctccaacccctccaagcagcatctcgcgtgcgggctcgtgccggcggcggggggcgcggcggcggggtacaggatctcgtgcgccagcgtgtcgaacaggtcggcggcggcgccgcacgtgtacgcgtatggcggggacgggacgtgctcgccgtactcggcggtggtcgccggggacgggtacctgtgctcggctgcgccgacgtcgtcgccgccaatgtcgatgcggtggtgggatctgaacgaggccggggatgggtcgaagcgggtgtacagggggcgggtgctctcggcggtgtccggcggcggggagtccgtgtgcgggctcgtcggggagaggatgcagtgctggaggtgcccgtggggggagggcgcgccggcgagggtggggttctcggcggtggcggtgggtggcgggttcgtgtgcgggttggtggtggggagcggggaggtgaggtgctatggtggaggggaggtggtggggagggagcccgcggggaggaggttcatgctgctcgccgccggcgagaggcacgcgtgcggcgtggatgatggcggggtggtgggttgctggggggaggcggcggcggtggcggccgcgtcgccgccgaggatcagccgcgcggtgtcgacggtggcggtgggcgacgcggtcacgtgcgtgctgtgggggaactggacggtctcgtgctggcccgagggggaggcgtcgccgccgccggcgctggcggggcagcagttcgtcgcgctggaggcgaaggggaaggtggtgtgcggggtgctcatgtccgactactcgctgcagtgctggggcgcaggcgtcgcgggcggggtgaggaaggtgttcgacaaggtgctcccgggtccgtgcgcgccgtcgaagtcgtgctcgtgcggcgtctggtcgggctccgcgcagctctgcgccggcagcggcgggggaggcggcggagacgtgtccgtttgttacccctgcggctacacccctcctccgatggcgctgtccccgacgtccaactcgtcgtcgtcgtcgagctctcaatcgaaggggaagcgtcgcccgagcaatctggcgatagcgttgatcagcgccggagctggatcggcgctcgtggcgctcctcgccgcgctcgcggcggtttactacctgcgccggcaccgtggcagcagctcgccggtctccgggcgcatccacgccgagccgacgggcacggcgccgcgcgtggagcggcggctcagcgcgctgctctccaagggcccgaacacgacggtcgagcagttcccgctggtggcgctccgcgccgccaccgactgcttctcgccggcgaagcgcatcggctccggcagcttcggcgcggtgtaccgcgcgtccctccccgacggccgcgaggtcgccatcaagcgcgccgagcgccgcgacacggggggcccttcctcctcctccgccgccgcggcgcggcgcgtcgaccacgaggcggcattcgtctccgagctcgcgctcctctcccgcgtcaaccacaagaacctggtccgcctcctcggcttctgcgccgacggcggcgagcgcatcctcgtctacgagttcatgcccaacggcaccctccacgaccacctccacaggcgtgcggcgtcggcggcggcgccgctctccccgccgctcgcctcctggccgtcccgcctccgcctcgcgctcggcgccgcccgcggcatcgagtacatgcacacctacgccgtcccgcccatcatccaccgcgacatcaagtcctccaacatcctcctcgactcctgctggaccgccaaggtctccgacttcggcctctccctcctcaacaccctggacggtgacaatgccgccgccggcgacggaggcaatgccggcgacggagacgacgaggagcggtgcgtgacggcggggacggtggggtacatggacccggagtactacaggctgcagcacctgacggacaagagcgacgtgtacagcttcggcgtcgtgctgctggagctgctgtccgggtgcaaggcaatccagaagtacgagggcagcggctcgcccaagaacgtggtggacatggccgtgccgcacatcgagggcgaccgggtgcaccgggtgctcgacgcgaggctgccgctgccgacgccgtgggagatggaggccgtcgcctacgtcggctacctggcggccgactgcgtcaggctggccggccgcgaccgccccaccatgagcgaggtcgtgggcgtgctcgagcgggccgtggcggcgtgcgacgagtacgaggaaggcggcgccggcgccggcggcgagcccgcgctgtcgcggtcgtgcaccgatgggtccacggcgacgtga</cdnaseq>

Protein Sequence

<aaseq>MSPPHLLLLLLALLLSPPLLLASSSFPLPTIAIAAVSNSSSNPS KQHLACGLVPAAGGAAAGYRISCASVSNRSAAAPHVYAYGGDGTCSPYSAVVAGDGYL CSAAPTSSPPMSMRWWDLNEAGDGSKRVYRGRVLSAVSGGGESVCGLVGERMQCWRCP WGEGAPARVGFSAVAVGGGFVCGLVVGSGEVRCYGGGEVVGREPAGRRFMLLAAGERH ACGVDDGGVVGCWGEAAAVAAASPPRISRAVSTVAVGDAVTCVLWGNWTVSCWPEGEA SPPPALAGQQFVALEAKGKVVCGVLMSDYSLQCWGAGVAGGVRKVFDKVLPGPCAPSK SCSCGVWSGSAQLCAGSGGGGGGDVSVCYPCGYTPPPMALSPTSNSSSSSSSQSKGKR RPSNLAIALISAGAGSALVALLAALAAVYYLRRHRGSSSPVSGRIHAEPTGTAPRVER RLSALLSKGPNTTVEQFPLVALRAATDCFSPAKRIGSGSFGAVYRASLPDGREVAIKR AERRDTGGPSSSSAAAARRVDHEAAFVSELALLSRVNHKNLVRLLGFCADGGERILVY EFMPNGTLHDHLHRRAASAAAPLSPPLASWPSRLRLALGAARGIEYMHTYAVPPIIHR DIKSSNILLDSCWTAKVSDFGLSLLNTLDGDNAAAGDGGNAGDGDDEERCVTAGTVGY MDPEYYRLQHLTDKSDVYSFGVVLLELLSGCKAIQKYEGSGSPKNVVDMAVPHIEGDR VHRVLDARLPLPTPWEMEAVAYVGYLAADCVRLAGRDRPTMSEVVGVLERAVAACDEY EEGGAGAGGEPALSRSCTDGSTAT</aaseq>

Gene Sequence

<dnaseqindica>96..2564#tttccccttctccatcttcttcctcctcctccccaactcgcgccaacaatggtcgtctccacaaactcctcctcctcctcctctcctccaacccaatgtctccacctcacctcctcctcctcctcctagccctcctcctctcgccgcccctcctcctcgcctcctcctccttccccctccccaccatcgccatcgccgccgtctccaactccagctccaacccctccaagcagcatctcgcgtgcgggctcgtgccggcggcggggggcgcggcggcggggtacaggatctcgtgcgccagcgtgtcgaacaggtcggcggcggcgccgcacgtgtacgcgtatggcggggacgggacgtgctcgccgtactcggcggtggtcgccggggacgggtacctgtgctcggctgcgccgacgtcgtcgccgccaatgtcgatgcggtggtgggatctgaacgaggccggggatgggtcgaagcgggtgtacagggggcgggtgctctcggcggtgtccggcggcggggagtccgtgtgcgggctcgtcggggagaggatgcagtgctggaggtgcccgtggggggagggcgcgccggcgagggtggggttctcggcggtggcggtgggtggcgggttcgtgtgcgggttggtggtggggagcggggaggtgaggtgctatggtggaggggaggtggtggggagggagcccgcggggaggaggttcatgctgctcgccgccggcgagaggcacgcgtgcggcgtggatgatggcggggtggtgggttgctggggggaggcggcggcggtggcggccgcgtcgccgccgaggatcagccgcgcggtgtcgacggtggcggtgggcgacgcggtcacgtgcgtgctgtgggggaactggacggtctcgtgctggcccgagggggaggcgtcgccgccgccggcgctggcggggcagcagttcgtcgcgctggaggcgaaggggaaggtggtgtgcggggtgctcatgtccgactactcgctgcagtgctggggcgcaggcgtcgcgggcggggtgaggaaggtgttcgacaaggtgctcccgggtccgtgcgcgccgtcgaagtcgtgctcgtgcggcgtctggtcgggctccgcgcagctctgcgccggcagcggcgggggaggcggcggagacgtgtccgtttgttacccctgcggctacacccctcctccgatggcgctgtccccgacgtccaactcgtcgtcgtcgtcgagctctcaatcgaaggggaagcgtcgcccgagcaatctggcgatagcgttgatcagcgccggagctggatcggcgctcgtggcgctcctcgccgcgctcgcggcggtttactacctgcgccggcaccgtggcagcagctcgccggtctccgggcgcatccacgccgagccgacgggcacggcgccgcgcgtggagcggcggctcagcgcgctgctctccaagggcccgaacacgacggtcgagcagttcccgctggtggcgctccgcgccgccaccgactgcttctcgccggcgaagcgcatcggctccggcagcttcggcgcggtgtaccgcgcgtccctccccgacggccgcgaggtcgccatcaagcgcgccgagcgccgcgacacggggggcccttcctcctcctccgccgccgcggcgcggcgcgtcgaccacgaggcggcattcgtctccgagctcgcgctcctctcccgcgtcaaccacaagaacctggtccgcctcctcggcttctgcgccgacggcggcgagcgcatcctcgtctacgagttcatgcccaacggcaccctccacgaccacctccacaggcgtgcggcgtcggcggcggcgccgctctccccgccgctcgcctcctggccgtcccgcctccgcctcgcgctcggcgccgcccgcggcatcgagtacatgcacacctacgccgtcccgcccatcatccaccgcgacatcaagtcctccaacatcctcctcgactcctgctggaccgccaaggtctccgacttcggcctctccctcctcaacaccctggacggtgacaatgccgccgccggcgacggaggcaatgccggcgacggagacgacgaggagcggtgcgtgacggcggggacggtggggtacatggacccggagtactacaggctgcagcacctgacggacaagagcgacgtgtacagcttcggcgtcgtgctgctggagctgctgtccgggtgcaaggcaatccagaagtacgagggcagcggctcgcccaagaacgtggtggacatggccgtgccgcacatcgagggcgaccgggtgcaccgggtgctcgacgcgaggctgccgctgccgacgccgtgggagatggaggccgtcgcctacgtcggctacctggcggccgactgcgtcaggctggccggccgcgaccgccccaccatgagcgaggtcgtgggcgtgctcgagcgggccgtggcggcgtgcgacgagtacgaggaaggcggcgccggcgccggcggcgagcccgcgctgtcgcggtcgtgcaccgatgggtccacggcgacgtgacgtggcatgtcgtggaatggaatgcccccatttgcatggttggcctcccttgcgcaagaacaacggggaggagagttttcttttgaggattttttgtttgttttattgttattgcttagcattagtcacagaacattcattagtattttatagaaaagaatcaaaattttagtgtaaatggtcttctgacattgttttgatttgaaatatttttgggttttctccccccttttttgttcttttctggtcttaatatacatatattgaagtcttcctcgac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0439600, RefSeq:Os04g0439600