Os04g0443500

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Revision as of 11:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0443500| Description = Similar to Protein phosphatase methylesterase 1 (EC 3.1.1.-) (PME-1). Splice isoform 3| Version = NM_001059424.1 GI:1...")
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Gene Name

Os04g0443500

Description

Similar to Protein phosphatase methylesterase 1 (EC 3.1.1.-) (PME-1). Splice isoform 3

Version

NM_001059424.1 GI:115458577 GeneID:4335946

Length

5495 bp

Definition

Oryza sativa Japonica Group Os04g0443500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22218902..22224396

Sequence Coding Region

22218983..22219086,22219223..22219307,22219429..22219499,22220489..22220603,22220760..22220839
,22221178..22221262,22221345..22221425,22221957..22222051,22222174..22222224
,22222742..22222822,22223535..22223607,22223933..22224010,22224100..22224132

Expression

GEO Profiles:Os04g0443500

Genome Context

<gbrowseImage1> name=NC_008397:22218902..22224396 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22218902..22224396 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcccgcgccgctcgcctcgctgcaggaggagggtgagggggagcccggcgagtcgccgtcctccgccgccgccgccgtgccgccccgccccgccacgcaccactcgctccacaagtacgcgccgctggactggtcggcctacttcgacgaggagcgccgcgtcgccatccccgacaccgaagacgttttcaatgtgtacatggccagatcggaggggcctgtcgtgttctgcctgcatggtggcggctactccgggctttcgtttgctctagcagcaagtcgtatgaaggaaaaggctcgtgttgtttctatggatctgcgagggcatggaaaatcaaccacaagtgatgattcagatttgtccattgaaactctcagcagcgatgtcatagctgttttacgcacattgtatggagattctccaccagccattatacttgttgggcatagcatgggcggttctgtggctatacatgtggccgcaaagaaagttattcgcaatcttcacggtcttgttgttattgatgtagttgagggaacagcaatggcttcattgattcatatgcagaagatcttagcaaatcgagcgcaacatttccctagcattgaaaaagctattgaatggagtgtcaaaggtgggccactcaggaacattgattctgctcgtgtttcgattccatctaccttgaaatatgatgaatcaagggaatgctatacatatcgaactcctctcgaggaaacagaaaaatactggaaaggatggtatgaaggtctttctgaaaagttcttgtcttgtccagtgcaaaaggtcctattattagctggaactgataggttggacagagctttaacaattggtcaaatgcaaggaaagtttcaaatggtggtggttcgacacactggacatgccatacaggaagatgtgcctgaagaatttgcatcgcacatactaaatttcatagctcgcaacaaaataggtcctaatggtgttgagattcctggactgattaaaaaatggcagcattag</cdnaseq>

Protein Sequence

<aaseq>MEPAPLASLQEEGEGEPGESPSSAAAAVPPRPATHHSLHKYAPL DWSAYFDEERRVAIPDTEDVFNVYMARSEGPVVFCLHGGGYSGLSFALAASRMKEKAR VVSMDLRGHGKSTTSDDSDLSIETLSSDVIAVLRTLYGDSPPAIILVGHSMGGSVAIH VAAKKVIRNLHGLVVIDVVEGTAMASLIHMQKILANRAQHFPSIEKAIEWSVKGGPLR NIDSARVSIPSTLKYDESRECYTYRTPLEETEKYWKGWYEGLSEKFLSCPVQKVLLLA GTDRLDRALTIGQMQGKFQMVVVRHTGHAIQEDVPEEFASHILNFIARNKIGPNGVEI PGLIKKWQH</aaseq>

Gene Sequence

<dnaseqindica>82..185#322..406#528..598#1588..1702#1859..1938#2277..2361#2444..2524#3056..3150#3273..3323#3841..3921#4634..4706#5032..5109#5199..5231#aaactccccaaactctccaaacccgcctcctacccatttcgctcgccgcctccgacgccgcggccgccgccaccgccacccatggagcccgcgccgctcgcctcgctgcaggaggagggtgagggggagcccggcgagtcgccgtcctccgccgccgccgccgtgccgccccgccccgccacgcagtaagtcaccccctcccactccccctccccatccccctgcccgccgcgccccacgccatcccccccgtggcgtggaaggcggaaaccctagctgacgcgcctggctgaccttcatcatccatcccccctcgcgcagccactcgctccacaagtacgcgccgctggactggtcggcctacttcgacgaggagcgccgcgtcgccatccccgacaccgaagacgtgcgttgcgcttgcgcgtcctgggagtagaggaccattcttttaaaatttttctcccggccggtgtgatcttgtaaataaatatatcatgttcccttttatggtgtggttttccttgtaggttttcaatgtgtacatggccagatcggaggggcctgtcgtgttctgcctgcatggtggcggctactccgggtacgtctgctccacgggctaacatgccgaattgtccgtttcgctggtgaattgcgtggatgttcatggcatttcagttaacaacttgctggaaatgattagcatggaaccaaaaatgattttctgaattgggtgtaaaaaaaatgctggatatgaaaggtgggactttcatatcaatgatattaagcagggagtgagtctcgaacccaggccggctagccgaccaatttgcggtgctagccagtaagactctggacccaggccggattgggtgtaggtatgtggtttacatggtaatagtcttattgaggatggtcctgtgggccaaaaaaaaactcgcagacagattgaagttatcagcacttaaagtgccgagggctgtgctgcaataatccttcttgtgttattttactttttaaggataaaggattaaatggtaatactgtaaaatgcagaagtgtcttatctttttggatatctatagaaggccttccatagagccttctttgcactacggaaaatgaaccaaaccctacttgtgttgcagcgtactccctccgtcccaaaaaaagtgaatctaggactggatgtgacacattatagtacaacgaatctggagaggggtatgtccagattcgttggattaggatgtgtcacatccagtactagttttttttttgtgggacggagggagtagaatttgttggtaaattttagttttgataatgatttgacaaaagaatcgagataaatgcagaaagcctggaattaaattggttttatcgtgaaaatcgaaagcgttgctgtttaatcttgattctattttgggtagggagcataagaaactatcatttccttttttattcaaattaatcatgcataagttactttatttgacttgattattactccttatgaaatgatgcaataagtcttaaattaatatatgtgttcttacattgtgttgattattccccaatctaccttaggctttcgtttgctctagcagcaagtcgtatgaaggaaaaggctcgtgttgtttctatggatctgcgagggcatggaaaatcaaccacaagtgatgattcagatttgtccattgaagtatgtccttcaatttgtacacgaattaatcctcttgataaaacatttgctcttcctcatataataatatatgtcattaactcaacttaataacttattaatttttgctgaacacatgaatacaatattttaccttttccatctttgcaattgcagactctcagcagcgatgtcatagctgttttacgcacattgtatggagattctccaccagccattatacttgttgggcataggtgagttggcaccatggactttgtacccattgcacgtgcactctttatctgaaataagatattaagattgactgaaagttctacttctctatgctatttctctccaaaggataatgtaatgtataaaatcctttgaatggtgcacatataccataatctgggaagtatagctaaaaggcaatttgacttttagtttcatttgtgcttctacttcagtgcttaatacaatgcttttgttttcttttccggatttggcaggctatttttttttcattactagcattgccattagcctcgagtgattgaaattcaattaaatagttatttatcctttttagcatgggcggttctgtggctatacatgtggccgcaaagaaagttattcgcaatcttcacggtcttgttgttattgatgtagttgaggttagctattccttacttaaccacttatattatgatttacaatttttcttattgctgatatcaaatgctttttccaaaacagggaacagcaatggcttcattgattcatatgcagaagatcttagcaaatcgagcgcaacatttccctagcattgaaaaagctgtatggtgatgtagtcctccatgacaatttgaatattgctagcaatcttattatttagaaaacatatcttgtttagcttattagttactccctctgtcccagaatataagaagttttagagttggacatggttattaagaaagtaggtagaagtgaatggtggagggttgtgattggatgagtagtggaggtaggtgggaaaagtgaatggtggagggttgtgattggttgggaagagaatgttgatggaaaagttgttatattttgggacggaggggagtatcatttatgagatatgttcctgtaaagaaacattctgatgaaaaaaaggtatggaggaatgcatttgatgttttaagctcataaacgtcattggcctgtaataggaggaaatcaaacaaacatgcaatgatggtcaagatcttgaatttctaataataggcatgctagtaaagtcagttgattatggtcatgcttactattgcagcagtaaaccttgtttcaataatatcctttcacgtaactatgcagattgaatggagtgtcaaaggtgggccactcaggaacattgattctgctcgtgtttcgattccatctaccttgaaatatgatgaatcaagggaatggtaaaaaactagcttgcatagtacatgcttgtattttgcagttcaatgcgcatatgcaaaactctgcaaaaaagctttacccttccttgaaaacctaagtgaactttcatacttggtttcagctatacatatcgaactcctctcgaggaaacagaaaaatactggaaaggatggtacgctttcagtttactggtgttctttatgtttcaatcgcttctgtttaaattctggtatttctgaacgcctttttgtgatcattacaatttaaaagcatgttattactactactatatactgtataaaagtattggtcatatttaattacaagtatctaactcttcattacctacgtaacagtattgatactactgtattctcttatccctgtcatgttttgatttaacaaagatctacttttttggttcctacacagtaatattaattctattgtattattctcttatcttatatgtctggaagcttgagctatcttgaatttatcgaataaaacagagaatagggtcaatgagttgtttcagaagtggtaaccacataacaaaatagcagcaaacatggggtgaactaggccagatttcagtttcaaataacatcgtttatttttaggaatacttgagttatttgtttatctccttttggttgatactgaaatatgaaatgtttctgttttaggtatgaaggtctttctgaaaagttcttgtcttgtccagtgcaaaaggtcctattattagctggaactgataggttggacaggtttgtatttatctttctagtgtaatgatgttaacaattttctcattcatgatgattgccctgttgaactcggacctctatcattattagctcaatgtaatttgtatttaattgattacaaaattttatgcttcctgttagctgcaatggcatgctatatatccttgggttttctacggccaagcagtagtgcattttaaggagttttaattaatctgccattaggctaaactgcactagtgatcaggctatcaaaattttgtggcaacctatttgtactgcgaaaagcgaattatattataagtcttttgtttctgaggaacatctggttatgttaaatcaatcagctggtatgtgttgaagttgatgcctcaagatatatgttcctatgaaacacagaccattgctttacttcctcaacctatgtataggtccttccaaaacagaactgcacatagattacacttcacaatctatcccacctgtacaggtatgctatcagatcaggaaatgagaaatgactcgagcacacaaaatgctacttctatttaagctatttgtcttatgaaaactattcgattaatgcatatatttttcttatcacccattcttagtgctttgatttgtgaaaattgcatcattttttaacacttctatgaaccattatggaggacatattggtaatgcattggtttgtcaatatgttttgcagagctttaacaattggtcaaatgcaaggaaagtttcaaatggtggtggttcgacacactggacatgccatacaggttagctcctagcctcctacagtcctaccgtaaggctttcaacattattattctaatgatatcaaggcaccccctttctagcattatttcaatttctgcttttctccctgctcctagagccatcctgcctagcagctctagggtttactttaaaaaagtcacaaaaaccaataatatgtagaggcagcacatgaattaacaaccaaaggttcatttatcgagtgttgttcgttatgttatgtaagtatgattgctaacaagatcatcgagctgatgaattattttgtaatggattgttaacataccatcgaaaatttcctttcaggaagatgtgcctgaagaatttgcatcgcacatactaaatttcatagctcgcaacaaaataggtcctaatggtgttgaggtcagtactgccttagcattacacttttcaaatatttactcttttacccatttttcaatgaacctaatgcctgttacttttcttctcagattcctggactgattaaaaaatggcagcattagacggaacggaccttgcgttccaatgttgacagtttttaggaaaacgatgaggcttctatctccaccggattgccatattttccacagggtagaaggtgttgcaagaagattggggatatcataggcacgagcgatctaggtttaaccattctgttgccgctcgccttgatgcatgtcatgagtgatttttatatgacacggcttgtgaattcctttcatggcaggttgtgagagtgaataaaatggagtaatttgactgctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0443500, RefSeq:Os04g0443500