Os04g0446700

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Revision as of 11:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0446700| Description = Leucine-rich repeat 2 containing protein| Version = NM_001059447.1 GI:115458623 GeneID:4335970| Length = 5231 bp| D...")
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Gene Name

Os04g0446700

Description

Leucine-rich repeat 2 containing protein

Version

NM_001059447.1 GI:115458623 GeneID:4335970

Length

5231 bp

Definition

Oryza sativa Japonica Group Os04g0446700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22366613..22371843

Sequence Coding Region

22368633..22369451

Expression

GEO Profiles:Os04g0446700

Genome Context

<gbrowseImage1> name=NC_008397:22366613..22371843 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22366613..22371843 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggacgcttcgctcaaaaatatctcttgatggtggagcagtgtgtggtagtcgcaggcgtggtcaaaataaatattgtcagagattcattaataatgttgaaaaagttctacagaattatcaaggaaagatggtggaagcatttggaattaagtttgaatttgacagcattctagttgataatctgaataagtgggttagttttgctgtgtcagcgaggacaaaacatctatcttttgatttagtgcctattagatttgctcgttgtgacgatcggttcatatttccatttgaacttttagacagtggaagcatttgccgtctacaacatcttcaatttagctttatctctttgcaaccaccttcctggttcggaggtttcccaaacctaaggaagcttgagcttaatttggtgcatgttacaagaaaggaacttgagaacatgttgtgcaactgttgctgtcttgagtggttgagcatggtcagatgccatctgaaggatgaccttagggtagatcgtccgatgtcccatttagcctacctgcttattagttgctgtgtcataaccaagatagagctccacgctacaaaactctctacctttatatatgagggtgaatttgttccaattgtcctcaatcatacgtcaaagctggtcaatgcacacattttcatttttgacgccatttttcaccatgttgttgcttcccttttccatggccttccaaatgtccacaagctgacattatgtattcctgatctacaactggaggttttccctttcaacaactgtgaactaaaaattcagttttcctag</cdnaseq>

Protein Sequence

<aaseq>MWTLRSKISLDGGAVCGSRRRGQNKYCQRFINNVEKVLQNYQGK MVEAFGIKFEFDSILVDNLNKWVSFAVSARTKHLSFDLVPIRFARCDDRFIFPFELLD SGSICRLQHLQFSFISLQPPSWFGGFPNLRKLELNLVHVTRKELENMLCNCCCLEWLS MVRCHLKDDLRVDRPMSHLAYLLISCCVITKIELHATKLSTFIYEGEFVPIVLNHTSK LVNAHIFIFDAIFHHVVASLFHGLPNVHKLTLCIPDLQLEVFPFNNCELKIQFS</aaseq>

Gene Sequence

<dnaseqindica>2393..3211#gcttcttcttcctcttcctcgataacaaacgcagccaacctccgctggagcccgcccgacctccgcctctcctaccttctccggcacaggaaccgaccgccagccgtcgaccggtcggagggctccgcctcgtccagatctggccgctgcttccctcggcggctcgtcggatcctgctgaatctcgcgtcggcgtcggcgtcagcggagggaactcaggaggggatcggtgcttcgcgtattgggggggcctcgatggtctccctccccaacgccgctccgaccgtctcctccccgcgtggcccgacgaggctcgcgggcatggccgacgaagggacgagtgctctcgccggggcatgaccgacgccggcgttggacgggaaacctccgagcttgcgaattcgatgcacaggctcggtgaagaacgggttcgacaggaactccaccggctggttgcctggttgccgtcccggcctcaaccaaaccaagcctagcctagcctagcctgacgcgagttcctctcgcattcgggtacggcacagcgtctttctcgttgttatctccaaataaattgcaaagaatcgccagtcctagaatctaggttttacccttactgtttgcttgtttattattgaagaagaagagggggtggggttcactggaggaagttcattggagtttattgggggtaaggagaacagccttccagcatctcgcgtttccaggatgctgtccagtgagcttccgcaggtttggttccctcgtctatatcgcctctctcctactatttgcgtgttctattcactccgagcattaatgcgcagtccgatcgatggtacaaagcaaatgtgtagtaattcatatcatgcaaagtcacactgtgattgccttatgcttcatcactgatatttaacgcaaactatggtcacaaatcgactcctttttgccgtaggattgctgcatcttagattttctctctgattcacagcgatgaggactgcagcaacaatcctgctcacatagaatctgcaaacgacttgattacaccttacatttgtagagaacaccttactgtctgcagttctacataattcttaaagattcactaatatcagaaactttataccatgcacgaatctgaccacccatactctgcatccaaatctctgaatgatcatggtccacctctctgtgcacatggagggatcatgtcctatctctatgtgtacatggagggtttagtgagtaattaattagtctattcatattcccccccccccccccccaaattatcatctcaataccaactttctttttttattgagaacagattaaatttccattgacctggcttaggaagaaagcctaacagcagacagtctttacacagaaagaaaaagaaagacacatccacatggtggtaacaacataaactgcattaatccaaaattgtatcttagattttcgctgtaagattcccatatcttagattttccatgtcaactcacggcaatgagaactgtagtaacaatcctgcttacatatgcccagaaataacagaattacatctaccttcgtacaaaaacaatcctttctgcacttctaccaaactacaagatccactaataacagaattacatcttacattcataaaaaaagcaatcctttctgcacttgtaccaaactacaagatccactaataacagaattacatcttacattcgtaaaaaagcaatcctttctgcacttgtaccaaactacaagatccattaatagcagcaaccttaacccatgcaaaaatgtaaccacctattctacatccaaatctctgcatgctcatgttcctcctctcttgcacatgtcaagggcgaatgggttattgattaattggagtggaaatacgccaacctgtgattacactggaaaaataacagagaacagcctatagtcacgcttttgcataatgtcaaaatggaaaacatttattttacaaagaaacccgtgccaacctgattttattgcatttagttattttatgttcttcacttattctgattattaaatattgtaatgtcattttatttttattttaggagctgcattttattaattttgtacttaaaatggggaagtatctaatgtgcaaaaggacaacaccgaaacctacccatggtaaagaaataagtgagaaagggaagtcaaatcttcaatttgaagacctcccggcagtatcttctcttccccattttgtgttcatattgaattatgtactggatttcttaacttgaaggtatgttgttctttcaattcaggatttgatatgcacaattttatcaaaattgcctcagaaagaggcaataaggactagtgttttatcaagtaagtggagatccatgtggacgcttcgctcaaaaatatctcttgatggtggagcagtgtgtggtagtcgcaggcgtggtcaaaataaatattgtcagagattcattaataatgttgaaaaagttctacagaattatcaaggaaagatggtggaagcatttggaattaagtttgaatttgacagcattctagttgataatctgaataagtgggttagttttgctgtgtcagcgaggacaaaacatctatcttttgatttagtgcctattagatttgctcgttgtgacgatcggttcatatttccatttgaacttttagacagtggaagcatttgccgtctacaacatcttcaatttagctttatctctttgcaaccaccttcctggttcggaggtttcccaaacctaaggaagcttgagcttaatttggtgcatgttacaagaaaggaacttgagaacatgttgtgcaactgttgctgtcttgagtggttgagcatggtcagatgccatctgaaggatgaccttagggtagatcgtccgatgtcccatttagcctacctgcttattagttgctgtgtcataaccaagatagagctccacgctacaaaactctctacctttatatatgagggtgaatttgttccaattgtcctcaatcatacgtcaaagctggtcaatgcacacattttcatttttgacgccatttttcaccatgttgttgcttcccttttccatggccttccaaatgtccacaagctgacattatgtattcctgatctacaactggaggttttccctttcaacaactgtgaactaaaaattcagttttcctagcactgtttggagaatgatatttgttttttttttaatctttcagaatctatggtcgttagataactcactgaagttttcctgtctcaaacacatacaattgtttgcgcacatattatctcatggttccgacaaaattctgtacttagcttatgtcatgagggctgcacccttcgttgaaaaggtggaagtgcatgtaagtactcttctcattttgtctttgctactcagtatttgatagctctcttgtttatgtatttactgaagctcttcatgcataaaaaggattagcgaaacatgttgtgtcgaaacagtgtaagattgaccatgggtattgttttaaatatatacttagtttggtgaaagtatcattgcaaatcaaaactttttgtgggcctatacctatttgtgcactaggtactgtagcatgtgtggtattgttcaagtgtctttcatattctcagtaatacatgggacctagtactttataaccttagtagaggaaagatggtgagatgtggaataaataagagcaccaatatcagtttgtgatacttaattctcagtctcaacgttagaaaatactattgaatgtgccatgattgtgtttgttagtttacatttaagttgggtaaatttgttagttagttttatatttacatggtagagcattgcaataattgttggcaagctgtagtaaagtgatttcagtctctgtttacatctttttacctatggaacagaaccaaacatcacaacaaaacatattttggttattagaggtagtacacaacataacatattaatggatcattgatgttctaacagggcttcctaattgattgtatctagttacatagtcaagctagaaatctgtcattcaatgaactaaggtgttctcaaacagtccttttgtttgcaaatatcctatttctttgatgtgttcaatctagtctatcaaaatatattcatatatttaatgaaatgctacacatacttccagtaaagtaaatatttgggaaacatgttttagttacttccatatgtggtttagacttttagttatgttatggcccctcagtgccagacgttctttcaatgtttttgtctttattgttaacagtgaaatttgtactttttgagctgaagtttgttaacctgatatttttgaactttttgcagtttgctagcggtcatagcctatggtttgcacaagaaggcccccttagacatgaacttgggcacgatgaatacaaatatctgaagaacctttgtgttacaggattcaaaggggctagaggacaacttgagtttcttttacatgttgtggaaaatgcaactgcactagacgttataactgtggatacaactgaaagaatgttggaaagtgacattaagaacgactatctctgcagtattgctcgtcagactatcgaacttcatatccgcgaggcactcccaccgaaggcgaagctctttgttctttaggctctgccaaaaagtctttaagcatgcatttagcggaatgtagtggtgtgctcccccccaccctcgatccgtatgatgtgcccggctattcaaatgcatgtctaggtgaagatgtgaggattgggacaggggatttctagatttttgtgtgtgtgtgtgtgtgtaaattctactgaaaggggataaagttcgattgttctgtcgcagtttcggtttctggatatatctgatgctgtctttgtggttataatgcctaatagcagaaaacctgtcttctgacaaacttgaaaaggttgtatatacgactgtttcagttgtacaatccagttttctatttccagttctatttgggaattctactatcatgtatgtgtactactgaattcagcaatagtaggtaaaaacaaatgaactgcagtatatgtcttggactaccttgtcagttttttcttaatcgtgtaacgttgaccaataaccatgtatgcatgtcgacatgccaataaatgttctaccagtgtagacagttcacaagatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0446700, RefSeq:Os04g0446700