Os04g0448200

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Revision as of 11:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0448200| Description = Conserved hypothetical protein| Version = NM_001059456.1 GI:115458641 GeneID:4335979| Length = 5662 bp| Definition ...")
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Gene Name

Os04g0448200

Description

Conserved hypothetical protein

Version

NM_001059456.1 GI:115458641 GeneID:4335979

Length

5662 bp

Definition

Oryza sativa Japonica Group Os04g0448200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22739323..22744984

Sequence Coding Region

22740049..22740151,22741002..22741702,22741802..22741888,22742849..22743865

Expression

GEO Profiles:Os04g0448200

Genome Context

<gbrowseImage1> name=NC_008397:22739323..22744984 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22739323..22744984 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaccgaggtgagccctcgctgaagccagaatggctggtgcgggggcatggcgcagtggctgccacgagcctctggactggaacttcttcgccgcgcgctgatgatcaaggtaggagcatttcatcaagaaaccaatcatcaggtcgtgaccgtgaacggagctcacaacagtccatctcacggaggagttctggctcaattggacctagacggcatgaccgggatggtacagcaaagtcaagaggctatgccagttttggaaggagcaaccgggacagggggggtgagaaggactctgaatcccgtaattgggagagtaggttgggtccacctgatgatcccttgtatgatggcttcaagccattcagctcatgcagacctgaaagggacaggcttaatcatactcgtttgaaggtagatacattgaatcaggcggtaggagaaagtttagacaatggtgttcgtagtgtatcaagaaaggtttctggtggtgtctcctttgagcgagaatttccacaccttggttctgacgacaagaatggaaagcaagatgtaggtagagttccatctcctggaattagcaccccgattcagagtatgcctttgggcactgcacttgatgggcggagttcagtgctagcagaagttcctgtacttagtggaccaaccaactgccctgttccatcttctttgttacgcactggttccagtaagcagatggaagtgccaaactgcgggactgcattaagtatggctgaaacagtgatgcaagctccgttaaaaatctcgacaacaccccagttatcgatcgatactcataagattgaagaaagaactatgaagcagtgcatcctaagacctcggacaccttcttcgaacaaaatttctgtatcaagttcttcagataagttaaaatccaaaggtgcaagagctggagattctaatggccctgtcaagggtacaatgcaactgccattacagctttctggcagctttattcgcgctccagtaaaacatgagcttgtaaagccaactcaatcaggaagctttcaagtccttagccgtgagcagaatggtactgtaaatactgccaaagaaagtactagcaatcctgcgagccctgttctaggccgatcatattcagtagaaccactgagaaagcctattgtaaaccaaaagctaaagggtgttgctaatggtctccctttacaactgcaaggatcatttggtgagagaaaatcaagtgcgaaagataagcataaattctttgagttgctgcgcagcaaatcattgaatggttcgtgcacttctactgtgtcttcatctacattgcttgatgagcaaaacaactcttgtcttgaattgtttgattctggagtcaaatgtatggaacatggaagtagttcttgtgaggaagcaaattcttgtgagggatctcagcagcacctttctgacaatgaggaaatcaatccaccatgggaaccacatgatgtttttgatgaaggaatgcaagaggttctgtctgacaacagggattttaactcttcatcagaaattgctgacacacaagatgtatatatgaagccccatacaaataatgctggttcctctccgtccatcatacctgcagaaatttatgatggctccatggggtccaactgtagtgatgatgaaactgttatgttgtttgaacccattggaacaggggaagaggaatcctatcctgctcaagacagacctagtccagaggagatggctttcttggtttctcttggctggaaagaggatgaaatagttccacctctgaaacaggaagaaattgctgattgtgtaagtgtttcttatgttttgctaatttcagcaataattttttattctcttcccatacacaatttacatgtttag</cdnaseq>

Protein Sequence

<aaseq>MDRGEPSLKPEWLVRGHGAVAATSLWTGTSSPRADDQGRSISSR NQSSGRDRERSSQQSISRRSSGSIGPRRHDRDGTAKSRGYASFGRSNRDRGGEKDSES RNWESRLGPPDDPLYDGFKPFSSCRPERDRLNHTRLKVDTLNQAVGESLDNGVRSVSR KVSGGVSFEREFPHLGSDDKNGKQDVGRVPSPGISTPIQSMPLGTALDGRSSVLAEVP VLSGPTNCPVPSSLLRTGSSKQMEVPNCGTALSMAETVMQAPLKISTTPQLSIDTHKI EERTMKQCILRPRTPSSNKISVSSSSDKLKSKGARAGDSNGPVKGTMQLPLQLSGSFI RAPVKHELVKPTQSGSFQVLSREQNGTVNTAKESTSNPASPVLGRSYSVEPLRKPIVN QKLKGVANGLPLQLQGSFGERKSSAKDKHKFFELLRSKSLNGSCTSTVSSSTLLDEQN NSCLELFDSGVKCMEHGSSSCEEANSCEGSQQHLSDNEEINPPWEPHDVFDEGMQEVL SDNRDFNSSSEIADTQDVYMKPHTNNAGSSPSIIPAEIYDGSMGSNCSDDETVMLFEP IGTGEEESYPAQDRPSPEEMAFLVSLGWKEDEIVPPLKQEEIADCVSVSYVLLISAII FYSLPIHNLHV</aaseq>

Gene Sequence

<dnaseqindica>727..829#1680..2380#2480..2566#3527..4543#acaagaccaccccagcacaaaaattcccacggaaaaacaaaaaaaaaaaagagagaaggagaaaacaaacggagagacaaatcccgtccagaaatcgtcgccccaattccagatttccagtcctctcttgtgccctccctgaaaccctcccgaaatcccacgaatcctcgcgattttttctccacccccaatccaccaccgcgttggccgccgccgccgccctccgcagatttcccattagggcgccgccggagtggtcgtcgccggccgaggggggcctcgaccccgcccctcccctgctccccccactgcgggggccgcgtcccgcttgatcaatcgcgtcgcggtggattgatacgggggttgggggattcgagaggggggcggagcggttttcccccaccccaactcgtcgtgttcgtgttttttttcttccaatctgcgcgcgttcgtgcgtgcgtgagggaggtcgtggtggtggtggtggtggaagttagggtttgagggtttggttccggagggtagggtctggtggtggccgtggctgcccccggccgggggtggtgggtggctggggggtgggggggattcgccgtgcaactgttgcgcgccgtggtggtgtggggatcgtgttgtggcggcggattggatcagtggccgctgtcgcgcctccgcccgctgctggtgctggtggaagtttagggggggtgagggtgcaggcccggcatggaccgaggtgagccctcgctgaagccagaatggctggtgcgggggcatggcgcagtggctgccacgagcctctggactggaacttcttcgccgcgcgctggtgagctcgctttcaatgctgactttctattgcatgacatataatggttagcattgattgtatactgcttgtgagattagcggcgggtatgttttgtagcattgtataatgttgcggtggctgttgattattaagttaggatgattggtgcggttcataagttcatttgtgcattttttaagtccattccttttgtgacttattgaggaattccagattgtggttttaccttgttcttatgacaaaggtcgttgttcaactcttcatatgcattgttgtggctgttcgtcatgttaagtctaatgtttagaccacaaagtgcttatttagtatgttacattaaacctagagattttactgtgttacaaatgtatagcaattgtggtaggcagttaaagaatcctgttgagagacattactttagatatcaacctcatattggtgtctattaaactacctcagttcatgtaacaaattaactgcagtaactgtttatgagtatgagattcttttatatggaaattatttctgttattggggccttttagttaaaactcaaaatattttattgcctgttgtaacttgggctttattgggcaatcatcatgtaagcatgatgatgtatattcttcctgttgattgctcaatgttattgctcgccttcagtgtttaggaaatttgctgtttccagttattgttgttttaatgccttcctaattggtttaacacaaggctgcatgattgagcttatcatttgtgtgcatatgcttgaatcaactactagggaaattgcttttcattttgcggtttgctgtgtattgttctaataagctgtctcttgcatgcttagatgatcaaggtaggagcatttcatcaagaaaccaatcatcaggtcgtgaccgtgaacggagctcacaacagtccatctcacggaggagttctggctcaattggacctagacggcatgaccgggatggtacagcaaagtcaagaggctatgccagttttggaaggagcaaccgggacagggggggtgagaaggactctgaatcccgtaattgggagagtaggttgggtccacctgatgatcccttgtatgatggcttcaagccattcagctcatgcagacctgaaagggacaggcttaatcatactcgtttgaaggtagatacattgaatcaggcggtaggagaaagtttagacaatggtgttcgtagtgtatcaagaaaggtttctggtggtgtctcctttgagcgagaatttccacaccttggttctgacgacaagaatggaaagcaagatgtaggtagagttccatctcctggaattagcaccccgattcagagtatgcctttgggcactgcacttgatgggcggagttcagtgctagcagaagttcctgtacttagtggaccaaccaactgccctgttccatcttctttgttacgcactggttccagtaagcagatggaagtgccaaactgcgggactgcattaagtatggctgaaacagtgatgcaagctccgttaaaaatctcgacaacaccccaggtagtttaatatttaagatatccgtgtttcccctttgatgtatccactgcattcactttattgaactagtgctctgtgttccatctcttttttacccagttatcgatcgatactcataagattgaagaaagaactatgaagcagtgcatcctaagacctcggacaccttcttcgaacaaaatttctgtacgtctcttataagtttcatgcctctgttgcaatactaatgatttcgttttgtttctctctatttaccattatcattaatgtgtttagattatgattgctcacttcaatcttgtttatcaagtgatttaagcatttagcctttgaaaacagctaaagcgttaaagtttcttgtatttagtacttccttgattgcttcaacgtactgtttggatcccttgtgataatgcttctgtatacttgtcacatcctttttgcttatccaccaaaacttatctgcttcaggaaccagcccttacctgtccctataatatattttatgctatttgtcatcatttttaaaactatagaactctcacaggataaaatctccacattcaggaaaagaaaaacaatcactagagctttatgtgagtctaaactataacatgcagatttatcttacttcagtatttggatattatgtttactttcttaatttttgatttattgtgattggaggtatcaaagctatatccttaaacacaattgtatatagttttgtacgctgtgtagccagtgagcatatatttttctactttttgatagctaaccaattgaaagcgcctttttcatggattggaaccacatgaatgaagccttactacaattgataaaggttccaatgaagattccagcgcattgcaactgaccctttctatattacttgatctgtgctggatcatctggatgcatttaataaaatatcttagagctcggtcacatcttttgtgtttttgtgggatcctatactaatctcttctcccagatgcagttcctttttgaacttatagcaaatgctgtactctggcagtattttttttttcacttatttatggagtcatgttctcttgtggtgattctcttgtggtgaactagtgacatattggtttgtgctaattcattcaaaatgctttacaggtatcaagttcttcagataagttaaaatccaaaggtgcaagagctggagattctaatggccctgtcaagggtacaatgcaactgccattacagctttctggcagctttattcgcgctccagtaaaacatgagcttgtaaagccaactcaatcaggaagctttcaagtccttagccgtgagcagaatggtactgtaaatactgccaaagaaagtactagcaatcctgcgagccctgttctaggccgatcatattcagtagaaccactgagaaagcctattgtaaaccaaaagctaaagggtgttgctaatggtctccctttacaactgcaaggatcatttggtgagagaaaatcaagtgcgaaagataagcataaattctttgagttgctgcgcagcaaatcattgaatggttcgtgcacttctactgtgtcttcatctacattgcttgatgagcaaaacaactcttgtcttgaattgtttgattctggagtcaaatgtatggaacatggaagtagttcttgtgaggaagcaaattcttgtgagggatctcagcagcacctttctgacaatgaggaaatcaatccaccatgggaaccacatgatgtttttgatgaaggaatgcaagaggttctgtctgacaacagggattttaactcttcatcagaaattgctgacacacaagatgtatatatgaagccccatacaaataatgctggttcctctccgtccatcatacctgcagaaatttatgatggctccatggggtccaactgtagtgatgatgaaactgttatgttgtttgaacccattggaacaggggaagaggaatcctatcctgctcaagacagacctagtccagaggagatggctttcttggtttctcttggctggaaagaggatgaaatagttccacctctgaaacaggaagaaattgctgattgtgtaagtgtttcttatgttttgctaatttcagcaataattttttattctcttcccatacacaatttacatgtttaggggcttaactttttaaaaacattttcactaatattcatagttgacccagcacttaaattgaccccattcattcagcttcataaaaaaaatctagttgaagattcccattctggtattcactttgtagtcttacatgggtggtctaatgggatggcttgccatgtcagcaaaatggattgatagtgtggcctgctaagcaagtgttgggcaccatcatcattgtactgcagatgaggcttgctaaatcaccaaaacatagggtttagttaatgctgaaatggaaatccagtgagcgctgacaaaatagctacactggaaaccctgttgaagtttctggaccaatggtcctctcttacaaccatacttatacatcacatttggtagtgcatacctcttttgagagtctaaaaaccaaaaggagctaaaatgactcctaccgatgtttaaataccttagaaacaagatatgtaatgcaggagagatgtgatgtttaatgatggcaaacaatgaaatggtcattcatgtgcaagtcccctatattatgcaacaagattgaaaaaaaatgtagaccttataaaaagaaacaaagggggcattattttagtataccttcaatctctgttatgcacactggtaaatttcatgcttgtcaatcattttctcatgacataatgtcccactgttttgtagttacgtcacaatgtgaggctgcagcagaagcttgaggagtgtaggggttaatgcagtaacgccagaattttaccgagcaacatgacgggggatctcatcgtgctgataacctgtggatgtgaagctgtatcttgatggttttcggcaaccacttcagccgtcagtatgactgtctagcttaacaaattgagtttttttgttgatgtttcagcgatgtggggatgtttcatgagtagaaaattttccctgctgaaaagaggttttaaggttttctccctcattttcccagaaggaatactaaatgaaattctgtctggtgttggaggcacataggtgtgcggtgctctgaaagaataggttttctttttactactcatgcttgtccttgtttcagaaatcagaaatgaaaggaaaagaatactgggtctt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0448200, RefSeq:Os04g0448200