Os04g0448600

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Revision as of 11:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0448600| Description = ChaC-like protein family protein| Version = NM_001059459.1 GI:115458647 GeneID:4335982| Length = 2595 bp| Definitio...")
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Gene Name

Os04g0448600

Description

ChaC-like protein family protein

Version

NM_001059459.1 GI:115458647 GeneID:4335982

Length

2595 bp

Definition

Oryza sativa Japonica Group Os04g0448600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22753865..22756459

Sequence Coding Region

22754215..22754288,22754367..22754446,22754531..22754602,22754717..22754757,22754959..22755015
,22755408..22755461,22756046..22756122,22756270..22756378

Expression

GEO Profiles:Os04g0448600

Genome Context

<gbrowseImage1> name=NC_008397:22753865..22756459 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22753865..22756459 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatgtgggtgttcgggtacgggtccctggtctggaaccccggcttcgcgcacgacgcccgcctcgtcggcttcgtcagggactaccgccgcgtcttctaccaggggagcacggaccacaggggcacgccggagttccccgggaggaccgtcacgctcgagcaccagcccggcgccacatgctggggtgttgcttacaaaatttcaacggaacaagataagcagacagctctggagcatctggaagtaagagagaagcaatatgatgagaagatttaccttgatttgtatatggactcctcaccaaaaacaccagccgtcaaaaatgtgatggtatacttagccacaacaaacaagcagagcaaccaaaactaccttggtcctgcaccgctggaagaaatggccaagcaaatttacctagctgaaggcccatctggacctaacaaagagtacctgttcaaacttgaggatgcattgaacaaaataggagttgttgatccacatgtccaggatctggcaaatgctgtgcgcaagtatccagacactgcggtatcttgctga</cdnaseq>

Protein Sequence

<aaseq>MAMWVFGYGSLVWNPGFAHDARLVGFVRDYRRVFYQGSTDHRGT PEFPGRTVTLEHQPGATCWGVAYKISTEQDKQTALEHLEVREKQYDEKIYLDLYMDSS PKTPAVKNVMVYLATTNKQSNQNYLGPAPLEEMAKQIYLAEGPSGPNKEYLFKLEDAL NKIGVVDPHVQDLANAVRKYPDTAVSC</aaseq>

Gene Sequence

<dnaseqindica>2172..2245#2014..2093#1858..1929#1703..1743#1445..1501#999..1052#338..414#82..190#tgcccacaccattcacagctcgcatcgcacgcggcgcaaccaatacgccattccaccggagcagccgggagcgcggaggccatggcgatgtgggtgttcgggtacgggtccctggtctggaaccccggcttcgcgcacgacgcccgcctcgtcggcttcgtcagggactaccgccgcgtcttctaccagggtaaataataccactaccacctgcttgcgtggttgcggttgttgcatctcgtccaatcccgcccccgcggtttgtgccgccgctgtttgatgtgttgatcccctactgattctctttggttctccggtcgccgccgggtgcggacagggagcacggaccacaggggcacgccggagttccccgggaggaccgtcacgctcgagcaccagcccggcgccacatgcgtaacgcttctctctcatatgttctttgttgatgtgctacgcgacttgctaatcgttaatccttgtgttgaattgagcatggattacattatgctttaagatgcttctttgttgttgttgttgttgttgatatctttatttcggtacatctgtgaaactgaggtactactggtcagccatgctaataaggagtaagtatgagtttgtgtatcagtgatcggatgaaaacaatgatcatcagataatcagatgtgtacttgtaatcctgtatcctaacttcctaaggtatttaagaatgggctataaggggagacctttctgcagtaatggtaaaagagtggcactgagactctcttgcagtccaaattaaaatggtcattgagataccgagatcgatctgaactctgaagggtggtacaaatggtaaaaaaggagcttgtttgtgatatgcaaaatggactaatgatctcatagctatttggcatgttctcttccatctttttatgctgttctgcaggccaagtaaccctgttctcagtgcatacattgaatttgtaaatgaatctctttgttttatgatgtagtggggtgttgcttacaaaatttcaacggaacaagataagcagacagctctggaggtaagttttccaagacggtagttaggtttgttttgttcactaatactgtgccataatattcagtttacacaactatttcttgattggaaaatcctgatgttgcttgtctgtttgtgtggagttaaatagattggtcaattgtgcatttgttcttttctagtccattgaaatatatgattcaatatagccaaatgataactactctgaaaatgcgatattgtcccagatggtcatctgaatgaactcagataaatgttatctagatgccatccctctttatgggccttatggcagcctgagaactgaagtaacaataccttaatcagtgctttataaactgactttcagttgcttaccttgcttgcatatttaccttcagatttgaattgcagcatctggaagtaagagagaagcaatatgatgagaagatttaccttgatttgtatatggtaagatatgaataatgaaattattctcttgttcagtaggaccgaaggtcctgggcctggtttttcttacttgtaaagtttactccttctctattcaatgaaattggcagcttgccgattcgttcaaaaaaaattattctcttgtagcagaatgtttgatgtgcagttaacttattgctcatatgtctggatctgcaacaggactcctcaccaaaaacaccagccgtcaaaaatgtgatggtgtaagtgattttctgatcttctttatgacttacagagattttgtaatattaaaatcaatactgaagtagtataaattaatgtttaattgatgtaatgtcatgcacgaccaacagatacttagccacaacaaacaagcagagcaaccaaaactaccttggtcctgcaccgctggaagaaatggccaagtatagcacctacttaacttgtagtattggcatattgcaacttaatctgaggtaaatttccataataacttgtgctatgtataggcaaatttacctagctgaaggcccatctggacctaacaaagagtacctgttcaaacttgaggatgcattgaacaaaataggtaaggtcatcatctttgtgttgcctttttattctttagaagattctagcgtgtgtatcaattatatgttcttggcaggagttgttgatccacatgtccaggatctggcaaatgctgtgcgcaagtatccagacactgcggtatcttgctgaaggatggcatttccctcctctttgggagggtaaaaatataactgaaggaagttagatcaattcatgctcaaacatcttgaatcttgtaaatgtggacagcttctgccgatattcttgtccatctgtagatggcagtagaaaattcgcaataaggatttaagttgggggtatgaaaactgccacattactgcgttgggaatcaaacccttcttttttactttcaaaacaagattgttctctacttctcttatattgaagcataatcactgtgcatggtctagttagctgcagcctgcaggcttggtcactcgaccatgctttgtcgtataaaatgttttatgattcaagct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0448600, RefSeq:Os04g0448600