Os04g0458300

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Revision as of 11:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0458300| Description = Similar to Non-cell-autonomous protein pathway2| Version = NM_001059512.1 GI:115458753 GeneID:4336037| Length = 4797...")
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Gene Name

Os04g0458300

Description

Similar to Non-cell-autonomous protein pathway2

Version

NM_001059512.1 GI:115458753 GeneID:4336037

Length

4797 bp

Definition

Oryza sativa Japonica Group Os04g0458300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23292381..23297177

Sequence Coding Region

23292433..23292628,23292742..23292791,23293888..23294011,23294105..23294212,23296380..23297044

Expression

GEO Profiles:Os04g0458300

Genome Context

<gbrowseImage1> name=NC_008397:23292381..23297177 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23292381..23297177 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctagaccagctccgctgctgcttcttctcgcggcggtgtgcctagtggccgccgcctccgccggcggtgccgatgcggcggagaggaaggcgacgacggtcggcgtctatgagctcaggaagggagatttctccatcagggtcaccaattggggagcggtcatcatgtccgtcgtgcttcctgactccagagggaaattggacgatgttgttcttggatatgacaccattgctgaatatgttaattcttctacttactttggagcgctcgtcggacgggtagccaacagaattgccaaggcgcggttcgtgctcgatggaaaagcttatcatctgtatccaaatgatggcaaaaacacacttcacggtggtcacaggggtttcagcaatgttacatggacagtgaaggagcatgttggtggaggtgacgcaccatacatcacactgtactaccatagctttgacggagaacaaggattcccaggcgccctagacgtgtacgtgacgtaccagctgtccggcccgtacgtgctgagcgtgcacatgaacgcgacggcggcgggcaaggcgacgccggtgaacctggcgcagcactcgtactggaacctcggtggcacgggcagcggcgacatcctgggtaacacggtgcagctgttcgcgtcgcggtacacccccgtggacgccgagctcatcccgacgggccaggtcgcgcccgtcaccggcacgccctgcgacctccgcgcgccgacgcccgtgggcgcgcgcgtccacctggtgacgggcggcctcagcaagacgggcgccaccatctacggcttcgacaccaactacgccgtggacggcggtgacgacgtcgacgcgcacgcgcacgcgctgcggcgggtgaccgtcgtccgggacggcaagtccgggcggtcgctggagctgtgggcgaaccagcccggggtgcagttctacaccggcaacttcctcacggccgacgtgaaggggaagggcgggaaggcgtacgggcagtacggcgcgctgtgcctggagacgcaggggttccccgacgccgtgaaccaccccaacttcccgtcggtgatcgtgaggcccggacaggtgtacaagcacgagatggtgtacaagttctcgttctag</cdnaseq>

Protein Sequence

<aaseq>MARPAPLLLLLAAVCLVAAASAGGADAAERKATTVGVYELRKGD FSIRVTNWGAVIMSVVLPDSRGKLDDVVLGYDTIAEYVNSSTYFGALVGRVANRIAKA RFVLDGKAYHLYPNDGKNTLHGGHRGFSNVTWTVKEHVGGGDAPYITLYYHSFDGEQG FPGALDVYVTYQLSGPYVLSVHMNATAAGKATPVNLAQHSYWNLGGTGSGDILGNTVQ LFASRYTPVDAELIPTGQVAPVTGTPCDLRAPTPVGARVHLVTGGLSKTGATIYGFDT NYAVDGGDDVDAHAHALRRVTVVRDGKSGRSLELWANQPGVQFYTGNFLTADVKGKGG KAYGQYGALCLETQGFPDAVNHPNFPSVIVRPGQVYKHEMVYKFSF</aaseq>

Gene Sequence

<dnaseqindica>53..248#362..411#1508..1631#1725..1832#4000..4664#gagagagagagagagagagagagagagagagagagagagagcagtgtgggcgatggctagaccagctccgctgctgcttcttctcgcggcggtgtgcctagtggccgccgcctccgccggcggtgccgatgcggcggagaggaaggcgacgacggtcggcgtctatgagctcaggaagggagatttctccatcagggtcaccaattggggagcggtcatcatgtccgtcgtgcttcctgactccagaggtgagcctctctctctctccgtcaaggacaccagagcttcatttgcctcgtgatttctctgctcgtttcatgggggtttcgagctgaaactttggagacttgttttctgccagggaaattggacgatgttgttcttggatatgacaccattgctgaatatgttgtaagatttgctgacctcattgtccctgttcttcttttaaggcagtgcatatgctcatattttcactgtttacttacctgtttctacacacaacttgtgaaacctcattacatagcgatagttccctgtcctcattgtcgtttgatatggattgtagaacagcattacatagcgatagtttgtgtgtttgagttttttttttttgcacttctgtctgcatccagtttactcaaattagttttctgttgctcatcacccagtttcaatttcacctaatcacctgctacatttctggacccgagaagcagggatgatcaacttaattggccattgactatcccataaaaatgctctcaattatttgaacgttttaaaaaactctcacgagacctttgttgtcgccttcagtttggggtcagttttcaaacatggaggtccaagatagataaaaaaaaacaattgacacaaatagagatgctgttgccacgtctaggaaaattcaatattatggcgtagttgcataagcatagagaagaggaaaagaaatagcaagaaacatatgatcgacaaaaggattagatggatgcagttttctttaagccagtggccatgttagtttgttacccaagaaatagtatatcagtctcacgaaagagagagacagctgacaacctcaccatgtgatgccggtgtgttgcctagttattacttgtcccgcacttttgcaatagccatataaatactttttttttcttggttctgttcttctttctgaaccttcacttctctctacatataatactatcccaaatcacaatccaatcacatgaacagagcagcacaagcacgagcaaaatcttatgcagaccaattgagtttttgacaaagtctacctactttcagaagggcaaaaaagtttctaactaatcttttttacatagtagttcatttgcaagctttccgttcaaaaaaaaaattgcaagctgggtaacccatcaaagaaaatgacagctctgagttcactgtattcaagtaccttaaagggtaaatgctaaattacctcacttcagtttgccttctgaattctgctgttcagaattcttctacttactttggagcgctcgtcggacgggtagccaacagaattgccaaggcgcggttcgtgctcgatggaaaagcttatcatctgtatccaaatgatggcaaaaacacacttcacggtattcttgagaaatttcccgaggtgcaagaaatccatggtgcatggttcatctctacgaacagtaagctaattttatctcatttttctgaaggtggtcacaggggtttcagcaatgttacatggacagtgaaggagcatgttggtggaggtgacgcaccatacatcacactgtactaccatagctttgacggagaacaaggtatggtcaatgcaaatcagcagaagtatcatctactttcacctttccaaaatacaacaatttagtattggattagacacaatataatttttacaagcacgaacatattatccaaattcgcagtataagatcgtgtcttatttagatatcgctatattttaaaatagaggaactatctttgcactttcatgcaatatgcttttgacttttttacatgacaattcaatgaacttgaccttggatggggagtggatctcacaagagacgttcaaaagacctgaaacgcaattttggtgaaacccctgtaatccatttccgtagtatttactgagtcaaactaaggccctgtttggtagagctacagctctcaactcctaactccaaactccaactccagtgggagctagctccactaggagctgtaggtggtctgaaagtgtttggctaacttgcttgctcagctccaaaaatcctgaaagagaggatagagggtagatagacaatactacccttgtgttttttcattgctgacttaggattaataatagatacttttccttaataagttcagcacggtgaatattaatttatttttcatttccttaataagttcagcacggtgattattaatttctttttcatttccttaataatttcagcacggtgattattaatttcttttccattttgaccatcgattgattgggactgactgccctgcccggcccttgtttgtcttggttgtttttaaaagacaacaagaaacgagctagctacccactgccattcattgccagggaggggggaacacattcaatcaatcattatatgattggtactccaaaataaagtaaaaattaaagttgttgcatgacatatatttagtaataataactagtaccattatcatcgaaagatagagcataagaccgcaaaacaacacaaaatacgatatatgtccatcaacctgcaatacgaccggctaggtaatcacgaaatgcatccatggctgttggtatggtgccttgccccaaagaccaatggttagcaccggtattgcggatatcttcaaacatcttctcaagtagctcttcattttgcaagccagtcttaataaatttggtgcagcctggtatgtcctgcacaatgtcattgtaaaatgatttagaacaactattttggcacatttgttttccaatttaacacataattttgaaatacttactgcctggtttagaaacccaaaaaataaaactctcattcatacactatatgaatcataccattgaattcttatacagtcatttcctacccccgaaaaaaaataaatatagttgcaatgttatctacaaatgacaaacaacggtaatgctaccaaatacatattttgccacatacatataaatttttctgaccaattctttctagaaatctaagtatagtgagaatatggttaaagtatacaaactaaaatcaagcaatacacacagatcgggagaaatttgggggagagagagtctagggtttgagggagctagtccagggtttagggttaccttgctccttgcaccagatctgctatgccaccggcgtcgcccagctcctgccgtgcgcctcctcgctgtggggagccgctcccgccgccaaagtgccgacgccatgaggtctcagcgccaaatccaaccgccgtgcgctgccctgacctccgcccagcgccgcccagacctccgaccggcgcccttgctgtgcgagaggaggcagccgccaccaccgccaccatgcgccgtgtgccttcactgctaccgccgccgctgcctcagtcctccctcccccttctctcttcgcggcctcgaggagaaacgcgatgtgcgctagtctggctcggtgcggtggggaacgaaggggtaggggcggtggcattctgcttataatttttgcgaaaagtaatgggtagcgctgtaatcaggctgggagtggagctgtggagttgtgttttccccgctccaccacgctagtgtaattttttggagcgatctgcactgctccgttcctcttttggatgaatccgaaccgtttggcataactccagctctaggtaaggtggagttaggagctggagctgtgccaaacagggcctaacggtcaaaattatgcctctgtcgaacaggattcccaggcgccctagacgtgtacgtgacgtaccagctgtccggcccgtacgtgctgagcgtgcacatgaacgcgacggcggcgggcaaggcgacgccggtgaacctggcgcagcactcgtactggaacctcggtggcacgggcagcggcgacatcctgggtaacacggtgcagctgttcgcgtcgcggtacacccccgtggacgccgagctcatcccgacgggccaggtcgcgcccgtcaccggcacgccctgcgacctccgcgcgccgacgcccgtgggcgcgcgcgtccacctggtgacgggcggcctcagcaagacgggcgccaccatctacggcttcgacaccaactacgccgtggacggcggtgacgacgtcgacgcgcacgcgcacgcgctgcggcgggtgaccgtcgtccgggacggcaagtccgggcggtcgctggagctgtgggcgaaccagcccggggtgcagttctacaccggcaacttcctcacggccgacgtgaaggggaagggcgggaaggcgtacgggcagtacggcgcgctgtgcctggagacgcaggggttccccgacgccgtgaaccaccccaacttcccgtcggtgatcgtgaggcccggacaggtgtacaagcacgagatggtgtacaagttctcgttctagtttaggtgactatacatggatcatatgtggtcattggtcgatcgcttcatctgctgtaagttgtgacattgtcggtgtcggtcggtgcaataatatgatatgcgttgatttgcaataagacgcatgggggaag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0458300, RefSeq:Os04g0458300