Os04g0459500

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Revision as of 11:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0459500| Description = Similar to GADPH (383 AA) (Fragment)| Version = NM_001059519.1 GI:115458767 GeneID:4336044| Length = 1851 bp| Defin...")
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Gene Name

Os04g0459500

Description

Similar to GADPH (383 AA) (Fragment)

Version

NM_001059519.1 GI:115458767 GeneID:4336044

Length

1851 bp

Definition

Oryza sativa Japonica Group Os04g0459500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23335706..23337556

Sequence Coding Region

23335742..23335783,23335881..23335991,23336091..23336643,23336731..23337233

Expression

GEO Profiles:Os04g0459500

Genome Context

<gbrowseImage1> name=NC_008397:23335706..23337556 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23335706..23337556 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtcggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccgacgacttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggcgatcaacgggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgcccctcgacgtcatcgccatcaacgacaccggaggcgtgaagcaggcgtcgcacctcctcaagtacgactccacgctcggcatcttcgacgccgacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggtgatcaaggtcgtctccgaccgcaacccgtccaacctgccgtggggcgagctcggcatcgacctcgtcatcgagggcaccggtgtgttcgtcgaccgcgacggcgcgggcaagcacatccaggccggcgccaagaaggtgctcatcaccgcccccggcaagggtgacatccccacctacgtcgtcggcgtcaatgccgaccagtacagccccgacgagcccatcatcagcaacgcctcctgcaccaccaactgcctcgcccccttcgtgaagatcctcgaccagaagttcggcatcatcaaggggacgatgaccaccacccactcctacaccggcgaccagaggctgctcgacgcgagccaccgtgacctccggcgcgcgcgtgcggcggcgctgaacatcgtgccgacgtccaccggcgcggccaaggccgtggcgctggtgctcccgaacctcaaggggaagctcaacgggatcgcgctccgggtgccgacgccgaacgtgtccgtggtcgacctcgtggtgcaggtgtccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacagcgccgccaacgagctcaagggcatcctcgaggtctgcgacgtgccgctcgtgtccgtcgacttcaggtgctccgacgtgtcgtgcaccatcgacgcgtcgctcagcatggtcatgggcgacgacatggtgaaggtcatcgcctggtacgacaacgagtggggatactcgcagagggtcgtcgacctcgccgacatcgtcgccaaccagtggaagtga</cdnaseq>

Protein Sequence

<aaseq>MASPMLSAATVPLQGGGLSEFSGLRSSSSLPLRRNATSDDFMNA VSFRTHAVGTSGGARRAPTEAKLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDT GGVKQASHLLKYDSTLGIFDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDL VIEGTGVFVDRDGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADQYSPDEPIISNAS CTTNCLAPFVKILDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTS TGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTLAEEVNQAFRDSAAN ELKGILEVCDVPLVSVDFRCSDVSCTIDASLSMVMGDDMVKVIAWYDNEWGYSQRVVD LADIVANQWK</aaseq>

Gene Sequence

<dnaseqindica>37..78#176..286#386..938#1026..1528#gctgctgctgcattcttcttgatctgatcgtcggacatggcgtcgcccatgctctccgccgccaccgtgccactccaggtaagtttggttagttgcttactgctcgtctctcctggttgcaagaatcgctctgaaagattgtgtttggtgtctgtgtgtgtggttatgtgtgcagggaggcggcttgtcggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccgacgacttcatgaacgcggtctccttcaggacccacgcggtacgtgcgtgaagcaatgcaccggaaaacttttgttgcgtcgtcgaggcggcgtgtgcgtgacgcggggtgttgaagtttgtgttgcggcgggcgcaggttggcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggcgatcaacgggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgcccctcgacgtcatcgccatcaacgacaccggaggcgtgaagcaggcgtcgcacctcctcaagtacgactccacgctcggcatcttcgacgccgacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggtgatcaaggtcgtctccgaccgcaacccgtccaacctgccgtggggcgagctcggcatcgacctcgtcatcgagggcaccggtgtgttcgtcgaccgcgacggcgcgggcaagcacatccaggccggcgccaagaaggtgctcatcaccgcccccggcaagggtgacatccccacctacgtcgtcggcgtcaatgccgaccagtacagccccgacgagcccatcatcagcaacgcctcctgcaccaccaactgcctcgcccccttcgtgaagatcctcgaccagaagttcggtacgtgcgcacacgcgcgcatcagcgatcctcgaccaattttactctctctctctctctctgatgcttaaccaatcaatggcgcaggcatcatcaaggggacgatgaccaccacccactcctacaccggcgaccagaggctgctcgacgcgagccaccgtgacctccggcgcgcgcgtgcggcggcgctgaacatcgtgccgacgtccaccggcgcggccaaggccgtggcgctggtgctcccgaacctcaaggggaagctcaacgggatcgcgctccgggtgccgacgccgaacgtgtccgtggtcgacctcgtggtgcaggtgtccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacagcgccgccaacgagctcaagggcatcctcgaggtctgcgacgtgccgctcgtgtccgtcgacttcaggtgctccgacgtgtcgtgcaccatcgacgcgtcgctcagcatggtcatgggcgacgacatggtgaaggtcatcgcctggtacgacaacgagtggggatactcgcagagggtcgtcgacctcgccgacatcgtcgccaaccagtggaagtgagaacgtagaagctgctgctgctgctgcctttgtaactccacctcgctccaaaaattttccccagacttcttccttcttcctctcgatcctttgtaatgagaatttcgaagtttcgagcgcccaacacagtttcttgtttctttctttgcttttcttccccacctcatctgacttttcactgtccggcacggattattatcgacttccggcaattggaaatcgcaatgctgtgtaatgttcatgtgtaataccgtatatactaccggacaccggttgccaggttctggtatagaatttcagcatgttgcttgggaccatttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0459500, RefSeq:Os04g0459500