Os04g0461000

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Revision as of 11:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0461000| Description = Similar to Myb-related transcription factor LBM1| Version = NM_001059528.1 GI:115458785 GeneID:4336055| Length = 209...")
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Gene Name

Os04g0461000

Description

Similar to Myb-related transcription factor LBM1

Version

NM_001059528.1 GI:115458785 GeneID:4336055

Length

2091 bp

Definition

Oryza sativa Japonica Group Os04g0461000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23422820..23424910

Sequence Coding Region

23422820..23422952,23423097..23423226,23424136..23424910

Expression

GEO Profiles:Os04g0461000

Genome Context

<gbrowseImage1> name=NC_008397:23422820..23424910 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23422820..23424910 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcgatcgccgtgctgcgagaaggaggggctcaagaaggggccatggacgccggaggaggaccagaagctgctggcctacatcgagcagcacggccacggctgctggcgctcgctaccctccaaggccgggctgcagcggtgcggcaagagctgccgactccggtggacgaactacctccggccggacatcaagaggggcaagttcagcctgcaggaggagcagaccatcatccagctccacgcccttctcggcaacaggtggtcggcgatcgcgacgcacctgccgaagcgcacggacaacgagatcaagaactactggaacacgcacctaaagaagcggctggccaagatggggatcgacccggtcacgcacaagccgcgctccgacgtggccggcgcgggcggcggcggcggaggtgcggccggcggcgcggcgggcgcgcagcacgccaaggccgcggcgcacctcagccacacggcgcagtgggagagcgcgcggctcgaggcggaggcgcgcttggctcgggaggccaagctgcgcgcgctcgcggcctccgcgaccccgggcgcgccgcacctcccggcaccccccgcgtcggcggcggcggcggcggcggctcacggcctcgactcgccgacgtccacgctgagcttctcggagagcgcggtgctcgccaccgtgctggaggcgcacggcgccgccgccgcggcggccgcgcgcgccgccatgcagcccatgcaggcgtacgacgaggcgtgcaaggaccagcactggggcgacgtcgacgccgccgacgtgggcttccccggcgccggagcggggttcacgggcctactcctcgaaggctccttgaaccagatcccgaggccggcggggagagacgcggaagccgacggcgagttccaggagaccgaggaggagaagaactactggaacagcatactgaacctggtgaactcctcgtcggcacctatgtcgacggccgtggttgtgcccgcctcccacgcgtactcgccggcgccggacttctga</cdnaseq>

Protein Sequence

<aaseq>MGRSPCCEKEGLKKGPWTPEEDQKLLAYIEQHGHGCWRSLPSKA GLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDN EIKNYWNTHLKKRLAKMGIDPVTHKPRSDVAGAGGGGGGAAGGAAGAQHAKAAAHLSH TAQWESARLEAEARLAREAKLRALAASATPGAPHLPAPPASAAAAAAAHGLDSPTSTL SFSESAVLATVLEAHGAAAAAAARAAMQPMQAYDEACKDQHWGDVDAADVGFPGAGAG FTGLLLEGSLNQIPRPAGRDAEADGEFQETEEEKNYWNSILNLVNSSSAPMSTAVVVP ASHAYSPAPDF</aaseq>

Gene Sequence

<dnaseqindica>1..133#278..407#1317..2091#atggggcgatcgccgtgctgcgagaaggaggggctcaagaaggggccatggacgccggaggaggaccagaagctgctggcctacatcgagcagcacggccacggctgctggcgctcgctaccctccaaggccggtaagcgccgcttatctagcttaaatttcttctcaacctctgcaatcctagctgcaatgttcggtcgaggcgatcgatcctcgaggctggctactctctgaactctgatctgaggtgcatgcaaaccgtgacaatcgtgtgcagggctgcagcggtgcggcaagagctgccgactccggtggacgaactacctccggccggacatcaagaggggcaagttcagcctgcaggaggagcagaccatcatccagctccacgcccttctcggcaacaggtgatcgattacttcgttttcgcatggatgcatcatgcatacaagatacgtagtgcacaactctccctcctgctagctgctcgctcgttcttcacctcgcacccggagcacatttaattccgtaatcgcgatggaacccttgattctcctgcacgaattttgactgctagtacttgttgctgaccggcaggtcaagaacacactagccagtagccaccattctgcaccgtagtcttggcagacatttatgaaagggttatgcaatgcaagggttggaacacggagcttagccaggggatgtgtaaatttcgcaggccgtgctacttacttgctgtccccgtacacacctgcttcagcattttgtccgtaacaaaccgtactgtccatagattaacacacaagctaggctaaaaattcttacgttagaacagaatcatcacttgttttcgttttgttcacacgtaatgctgcattgctcatcttttgcccgtcgaacaaccacgcattagctgtgagcacagaccaatcaatgcatgcatcaacaagggaaaaagtgtgaaaaggttgggcagtgagaggctcggcccagaattttcctttcttttctcccatatgattcggcattcaagctcgtcatttaaggaggcgagcccccccatcattgtggaccaaaactggggtttggtccactgttgccacctgcccctcttcccattttgactcacagcttccgatcatctctgccctctgtctgtactacgccacgcacgccttaaatcacaccgccgattatttacgttttcaagagtgctgtttgtttaattttgtcactgcgaatggagggcttttgacgtgcgattttcctgatcttttttcttggccggcgttggcgttgttgttgttttgcaggtggtcggcgatcgcgacgcacctgccgaagcgcacggacaacgagatcaagaactactggaacacgcacctaaagaagcggctggccaagatggggatcgacccggtcacgcacaagccgcgctccgacgtggccggcgcgggcggcggcggcggaggtgcggccggcggcgcggcgggcgcgcagcacgccaaggccgcggcgcacctcagccacacggcgcagtgggagagcgcgcggctcgaggcggaggcgcgcttggctcgggaggccaagctgcgcgcgctcgcggcctccgcgaccccgggcgcgccgcacctcccggcaccccccgcgtcggcggcggcggcggcggcggctcacggcctcgactcgccgacgtccacgctgagcttctcggagagcgcggtgctcgccaccgtgctggaggcgcacggcgccgccgccgcggcggccgcgcgcgccgccatgcagcccatgcaggcgtacgacgaggcgtgcaaggaccagcactggggcgacgtcgacgccgccgacgtgggcttccccggcgccggagcggggttcacgggcctactcctcgaaggctccttgaaccagatcccgaggccggcggggagagacgcggaagccgacggcgagttccaggagaccgaggaggagaagaactactggaacagcatactgaacctggtgaactcctcgtcggcacctatgtcgacggccgtggttgtgcccgcctcccacgcgtactcgccggcgccggacttctga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0461000, RefSeq:Os04g0461000