Os04g0462400

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Revision as of 11:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0462400| Description = Amino acid/polyamine transporter II family protein| Version = NM_001059537.2 GI:297602865 GeneID:4336065| Length = 2...")
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Gene Name

Os04g0462400

Description

Amino acid/polyamine transporter II family protein

Version

NM_001059537.2 GI:297602865 GeneID:4336065

Length

2393 bp

Definition

Oryza sativa Japonica Group Os04g0462400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23496536..23498928

Sequence Coding Region

23497441..23498428,23498524..23498657,23498881..23498907

Expression

GEO Profiles:Os04g0462400

Genome Context

<gbrowseImage1> name=NC_008397:23496536..23498928 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23496536..23498928 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtcacttcttcagttcttcctaaggtggttgatgatgccggcgagggcgaggccaaccctcgccgggcgaaatggtggtacgcgacgttccacagcgtcaccgccatggtcggcgccggcgtgctcagcttgccgtacgccatggctcacctaggatgggggccggggacggcggcgctggtggtgtcgtgggggatgacgctgtacacgctgcggctgctgatcgagctgcacgagtgcgtgcccggggtgcggttcgaccggtaccgcgacctcggcgcgcacgcgctgggcccgcgcctggggccctggctcgtcgtgccgcagcagctcatcgtgcagctcggctgcgacgtggtgtacatggtcatcggcgggaaatgcctcatgaagttcgccgagtcggtgtcgtcgtggtcgcgcgcgccgcagctgcaccaccagtcctactggatctgcatcttcggcgcctcccagttcctcctctcccagctccccagcctcgactccatcaccgccgtctccctcgccgccgccgccatgtccgtcggctactcgacgatatcatgggcggcgtgcttggcgaggggtactcccgcggcggcggagggcggcggtgggggggtgagctacgcgtacaaggacgggacggcggcggactcggtgttccgggtgtgcagcgcgctggggcaggtggcattcgcgtacgccgggcacggggtggtgctggagatccaggcgacgatcccgtccacgccgacgaagccgtcgaggggggccatgtggaagggcgccgtggcggcgtacctggtcaccgcgctctgctacttccccgtcgcgatcgcgggctactgggcgttcggccgcgacgtctccgacaacgtgctcgtcgcgctgcgccggccgccgtggctcgtcgccgccgccaacatgatggtcgtcgtccacgtcctcggcagctaccaggtgtacgccatgcccatcttcgagaccctcgagacgattctgatcaccaggatcaggctccctcccggggcgctcctccgcctcgtcgcccgatcagcctacgtcggtaagaatcgatccgatcgaccaccacccatcgctgcaagaactgatcgcatattcgcatccgttcatggctga</cdnaseq>

Protein Sequence

<aaseq>MVTSSVLPKVVDDAGEGEANPRRAKWWYATFHSVTAMVGAGVLS LPYAMAHLGWGPGTAALVVSWGMTLYTLRLLIELHECVPGVRFDRYRDLGAHALGPRL GPWLVVPQQLIVQLGCDVVYMVIGGKCLMKFAESVSSWSRAPQLHHQSYWICIFGASQ FLLSQLPSLDSITAVSLAAAAMSVGYSTISWAACLARGTPAAAEGGGGGVSYAYKDGT AADSVFRVCSALGQVAFAYAGHGVVLEIQATIPSTPTKPSRGAMWKGAVAAYLVTALC YFPVAIAGYWAFGRDVSDNVLVALRRPPWLVAAANMMVVVHVLGSYQVYAMPIFETLE TILITRIRLPPGALLRLVARSAYVGKNRSDRPPPIAARTDRIFASVHG</aaseq>

Gene Sequence

<dnaseqindica>501..1488#272..405#22..48#gtgcaccgatcagacttgagtatggtcacttcttcagttcttcctaaggtctgcgaataatcacactgccattttttgtgaccaaaacgtgccgaagctgactagctagcttggaattagtgtccgtgatgttgtaatctagtggatcatggatggaacgaggcgtatatgaatgtgtctagaatgcgttaatggacatatatatcttccatcgatcttctgcttgatctaactctacacgcattttggggtctttttctttctttctcaggtggttgatgatgccggcgagggcgaggccaaccctcgccgggcgaaatggtggtacgcgacgttccacagcgtcaccgccatggtcggcgccggcgtgctcagcttgccgtacgccatggctcacctaggatggtaagtcaattatactgtacgtacgcgcgccatggctagctggagctgtgtgcatgcagcgaatgactgtggtaatcgatcgaacgatcgagcagggggccggggacggcggcgctggtggtgtcgtgggggatgacgctgtacacgctgcggctgctgatcgagctgcacgagtgcgtgcccggggtgcggttcgaccggtaccgcgacctcggcgcgcacgcgctgggcccgcgcctggggccctggctcgtcgtgccgcagcagctcatcgtgcagctcggctgcgacgtggtgtacatggtcatcggcgggaaatgcctcatgaagttcgccgagtcggtgtcgtcgtggtcgcgcgcgccgcagctgcaccaccagtcctactggatctgcatcttcggcgcctcccagttcctcctctcccagctccccagcctcgactccatcaccgccgtctccctcgccgccgccgccatgtccgtcggctactcgacgatatcatgggcggcgtgcttggcgaggggtactcccgcggcggcggagggcggcggtgggggggtgagctacgcgtacaaggacgggacggcggcggactcggtgttccgggtgtgcagcgcgctggggcaggtggcattcgcgtacgccgggcacggggtggtgctggagatccaggcgacgatcccgtccacgccgacgaagccgtcgaggggggccatgtggaagggcgccgtggcggcgtacctggtcaccgcgctctgctacttccccgtcgcgatcgcgggctactgggcgttcggccgcgacgtctccgacaacgtgctcgtcgcgctgcgccggccgccgtggctcgtcgccgccgccaacatgatggtcgtcgtccacgtcctcggcagctaccaggtgtacgccatgcccatcttcgagaccctcgagacgattctgatcaccaggatcaggctccctcccggggcgctcctccgcctcgtcgcccgatcagcctacgtcggtaagaatcgatccgatcgaccaccacccatcgctgcaagaactgatcgcatattcgcatccgttcatggctgaatcatatctgtcatggcacgcagcgttcacgctgttcgtcgcggtgacgttcccgttcttcggcgacctgctcggcttcttcggcggcttcgggttcacgccgacgtcctacttcgtaagacgcgattgcccatccgaaatgaacactttgccataattctcgtaacattcggtcttcaccatgacaccatggatgaaaacatttaaatttcttttgaatgcagctcccctgtattctgtggctgaagatcaagaagcctccgaggttcagcgcgtcgtggtttgccaactgggtaaataaagacacacatttttttccgtcttccggacactcatatgaagcaaaaactaaactgaatgcatgcatgtaactgtagtagtagagattcaggtttgacaggttctgtttgtttcttctgcttcatctgtcagggttgcatcgtcgttggagtgctgttgatgatcgcttccaccatcggcgggctacgaagcatcatccaggatgcctcgacgttccagttctactcgtgatgggtgatgatgcatacgtactgacttagtacatacagaacgtcaggatcaactgtaaccaggccaagaaattagaggtatcaagagtagttgcaaacgatggccatattattctgtgactttcattgatcgttggcctcgcttgcagcgtgccggccagcggtccttgcgaaatgtgtaactgaagacgaattacagtagtgattcagtgatgcgcatcgaccctgtctgtgcaccagatgtaatagaccttgctgacacacggtttcgcaatcctcatgctgaataacatcgatggcgattgcagggagaaaaatatatataaacatctagtaatacaagtttactatcgcagtgattgcgaatcttctatt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0462400, RefSeq:Os04g0462400