Os04g0477900

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Revision as of 11:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0477900| Description = Similar to Cysteine proteinase EP-B 1 precursor (EC 3.4.22.-)| Version = NM_001059623.1 GI:115458975 GeneID:4336163| ...")
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Gene Name

Os04g0477900

Description

Similar to Cysteine proteinase EP-B 1 precursor (EC 3.4.22.-)

Version

NM_001059623.1 GI:115458975 GeneID:4336163

Length

2250 bp

Definition

Oryza sativa Japonica Group Os04g0477900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24311430..24313679

Sequence Coding Region

24311451..24311760,24313013..24313395

Expression

GEO Profiles:Os04g0477900

Genome Context

<gbrowseImage1> name=NC_008397:24311430..24313679 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24311430..24313679 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacaacaatgtcgtcgaggctcgcatctcgcgccgcccgcttagctgcggtggcggcatctcgcgccgcccgcttagctgcggcgtccgcatctcgtaccggggccggggacccctcagcgcgggccaccgccactgccgcatctcgcgccgctcgcttagctgcggcggccgcatctcatgccggaggccccacagcgcgcgcgattgcggctgccgtatctcgcgccgcccgctcaatctcctcgaagctccttgacgacgacatcgctgcccgcctctccttccgctacagcaccgagcccccagatgatggtaagtgcgttacagccaaggacctcgagtcagatcaagccgtatgggccttatatgagcgctggtgcaagtcatacaacaagaagcgtgaccatgctgagatgattcgccggttcgacatattcaagctgaaagcatcgcttgtgcacagctggaacaattatgttcatgaagacaaagaggaattagctcgtgcaaaaaagagaagggatttaggcaaacctgtcgatccttggtacctacaagaggaattaggcccatccgccgatgggggagacactgttaaccaatactggcggggcatgttgaaggaaaatgaccaagggatggatctgcctgacatccaaggaggaaaaaaaatgagcactgaagattga</cdnaseq>

Protein Sequence

<aaseq>MTTMSSRLASRAARLAAVAASRAARLAAASASRTGAGDPSARAT ATAASRAARLAAAAASHAGGPTARAIAAAVSRAARSISSKLLDDDIAARLSFRYSTEP PDDGKCVTAKDLESDQAVWALYERWCKSYNKKRDHAEMIRRFDIFKLKASLVHSWNNY VHEDKEELARAKKRRDLGKPVDPWYLQEELGPSADGGDTVNQYWRGMLKENDQGMDLP DIQGGKKMSTED</aaseq>

Gene Sequence

<dnaseqindica>22..331#1584..1966#agattcctatcctctctcgccatgacaacaatgtcgtcgaggctcgcatctcgcgccgcccgcttagctgcggtggcggcatctcgcgccgcccgcttagctgcggcgtccgcatctcgtaccggggccggggacccctcagcgcgggccaccgccactgccgcatctcgcgccgctcgcttagctgcggcggccgcatctcatgccggaggccccacagcgcgcgcgattgcggctgccgtatctcgcgccgcccgctcaatctcctcgaagctccttgacgacgacatcgctgcccgcctctccttccgctacagcaccgagcccccaggtaaaccttaacacccaatcccgctctcttcatggtctcccagcaaatgagaattttcagaatatgccactcaatttgcaccaccttcaggatttgccattaatccatgtttggcgaacaaaattgcataacaccgtaatctcgagagaatttgtatttaaaagataatgcagatgaattcctaatccccgtgcctgagaatttcagaatatgccactcaattcacaccaccttcagaatttgccactcaatttgcaactttttcaaaacatgccactaaggactctaattgtttcatccccaccaagcacgggaattgtttcattccgtgtcactccgtctctctgaagttacgcgtcgtcgcccgtccgtatcgtgccgtccgttgcgtcatcttgccgccgccagcgtggggaggaaggccgccggcgtgggtgaggagcttggccggtgttggggaggaagagctcgccattccggtgcagggaggaagagctcgctagcatgaacggtgtagaagcttgccgacatggggaggagagctctgccggtgcgggaggaagagctcgtgggcatgggaaggaggagctgccggcgttggaaaggaagagccaccggtgttgggaaggaataactcgcgcgggaaggaagagttcaccggcatgtacggggaagaaacttgtcggcgtggagaggaggagctctgccggcatggggaggaagagctcaccggcgttggggaggaggacccgccggcgtggggagggagaacttgccggcgtggaggaggagctcattggcggcgcccagatgactcaaacggacgtcgtgacacgggcgggcgacggcgctcggcttcggagggcggagtggcacgggatgaaacaattcgcgtccttagtggcatgttctgaaaatgttggaaattgagtggcaaattctgaaggtggtgcgaattgagtggcatattctgaaaataaacagccaaccatggatttagtaacagactaatattcgtgtcatcaaaacaatgttggcatttattgtgtttagtttttacaccattatcacgtgtgatatctctcagcttgaaagctcaacttttctaccaataaaaattttggctggaacctcttgagccaaaggctgggatctaattccattatctgaaacatcatataaattcttctttgtgcttgcgaaaaatcaaatttgttcacactactaacttttgcgaattgaattgtgatagatgatggtaagtgcgttacagccaaggacctcgagtcagatcaagccgtatgggccttatatgagcgctggtgcaagtcatacaacaagaagcgtgaccatgctgagatgattcgccggttcgacatattcaagctgaaagcatcgcttgtgcacagctggaacaattatgttcatgaagacaaagaggaattagctcgtgcaaaaaagagaagggatttaggcaaacctgtcgatccttggtacctacaagaggaattaggcccatccgccgatgggggagacactgttaaccaatactggcggggcatgttgaaggaaaatgaccaagggatggatctgcctgacatccaaggaggaaaaaaaatgagcactgaagattgaacatgttacataagagcgatttaatttgcttatggaaatcccttaccctcaaggagttgaacttagctccccatataaatcaactgtaataataagttatgatttgccgttccatgtgtagtctatgcttatgtcgtaccatcttatctaagtggtcatgaattccatatgcttccgcctgtgggaagtttgtgtattttagccttttgggtttacgggcacaagtgttcaaacagatcaagatcaagtgtgaagatggtatatatgtcagttgtttgtacatt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0477900, RefSeq:Os04g0477900