Os04g0482900

From RiceWiki
Revision as of 11:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0482900| Description = Conserved hypothetical protein| Version = NM_001059655.1 GI:115459039 GeneID:4336197| Length = 3044 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0482900

Description

Conserved hypothetical protein

Version

NM_001059655.1 GI:115459039 GeneID:4336197

Length

3044 bp

Definition

Oryza sativa Japonica Group Os04g0482900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24537913..24540956

Sequence Coding Region

24538133..24538312,24540519..24540668,24540767..24540814

Expression

GEO Profiles:Os04g0482900

Genome Context

<gbrowseImage1> name=NC_008397:24537913..24540956 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24537913..24540956 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccatggtggcgtccacggcgacctccttctcctaccacaagccgcgattcgcggtggagtgcaggaagaaggaccgggaccgggacagggacagggagcggccggagcgggagaaggagcacaagtacccgttcaaggtcgtcgagatcacgccgccgccgcggtgcctcggcgtccgctgcttccccaccaacatccactgcggggagagcgtgacgatcgaagggcaggcgtacacggtgtctgcggtgacgcaccggtaccagctgcgcaaggggcgctacgagcccagcgagaagcgcctcgacgtcctctccaccggcagatacctcctcaacctctacctcgacggcctcctcgacaagtcctga</cdnaseq>

Protein Sequence

<aaseq>MAAMVASTATSFSYHKPRFAVECRKKDRDRDRDRERPEREKEHK YPFKVVEITPPPRCLGVRCFPTNIHCGESVTIEGQAYTVSAVTHRYQLRKGRYEPSEK RLDVLSTGRYLLNLYLDGLLDKS</aaseq>

Gene Sequence

<dnaseqindica>2645..2824#289..438#143..190#gcacgcctgccaatcccgccacgttcttgcggcccagccatccatccaatcctccctcccccccccccccccccccttcctgcacgattcgcgcggatttccgcagcggcaaacattcgttcgatcgattgaccgatcggccatggcggccatggtggcgtccacggcgacctccttctcctaccacaaggtgagcgcgtcgtttccgcagacgatttattgttcagttcatgccgccatcgtggttcgtggcgaactaaaccatctgatcaacgctactcgattcagccgcgattcgcggtggagtgcaggaagaaggaccgggaccgggacagggacagggagcggccggagcgggagaaggagcacaagtacccgttcaaggtcgtcgagatcacgccgccgccgcggtgcctcggcgtccgctgcttccccaccgtacgtcgtctctgcaatcccctgcctctgcctcgtcctgaattctgaattctcttatgcatgggtcatgggtgcattgcatatgcacaagcctgatcataccacgatagatacgcttgaattgaattcgctcgttaacaagaacaaaaggggaaatgcgtatgcacaatgcacaagcctgatcataaaaaaacattcaaatcgttgcttaaattcgagaatgaaaaaacgtatctgacttatctaaaaaaaaaacgtatctggattctggaaacggttattaactgtggaacagatttttcctgtgacaaatggtgtagcattgttccagaattcagtgcaccacaatttcggttgcagagtcacggtctgctcccagtgtataaattcgatcctaaatattcttcgcagcttttggagaaatacagattgcgtcagtctactagttaaattgtagcacgtagtaatgcagtggtttttcattaaggggaaaaaaaggacacgttctttgacaacttactgaagtgtttccagcactgcgagaacaaaaaaataatttagggtttatttggttcacaggatttttaaatcataggaaaaaaaaagataaagagtaaaggattagaatgccacaaatccttataaaattctcgaagagctctcatctcatactaaaaaaacatataaaacaggattgtaagaatataatccttaggaatttggtaggatttattcctaaacaactaataatgcatatagaaaaaacctaaggtttcaattcataaaataatcatttgtaaattctttaaaccgaatgaacccttacagtgttttctgaagtgatcactgactggttatgctattgttgtaacttcaagaacaacaatttagcacccgttttttcgaaaaaaaaaacaattcagcacccgtgcgcagctaggaccatcaacaactagcctccatgctatccttttctttttagataatagtgatatatcctactctagttgtgtttttgtttgtaaaccttgttttagtagtttttttttagaaatcaccggaggaaagagctccctcacttgaattttccattgataatactccctccgtttcacaatgtaagtcattttaacatttcccacattcatattaatgttaatgaatctaaacatatatatttatctagattcattaatatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagaaagtaacgagtttgaggttacgtagggcgccgtagcgataaggtcgcgccattacctattttaaagatataagaaacgggagaaagcttgtttttcaagcagatataacatatctaccaacgttgttcattcgttcagcccagaggctagcatgatcgatgcagcggcgaagcaaacggcgtaggcagggttgttcattcttaaaagtcacctcatgcctatggttccaaaggcacataagcatagcaggaagaagctgtgtagatgagcagccggtagggtagtattccctctgtttcacagtgtaagactttctagcattacccatatacttatagatgttaatgaatctaaacacatactatatatatatatatctagattcattaacatctaaataaatataagtaatgctagaaagttctacattgtgaaacggaggaagtagacaagtttaacctcgccaaggtcctgatgatgtctgtgaagcctgttttagcagttttaaccttgcaagacaacgaactcttttcctgctggaaagtcgaagcaacgtaatttggtactactaccatcaagaatctctgccagatagccatcatacatgcacgaaagcgctgtcagattgtcaaagtaattccctcgagaataaaaagattgtcaaagccaagccgagtgcctcccattgttctagataccaagacccgactttccaacggggaaacaaaaaattatgctgcttttcctcctccttgcgtgccagctatcaccgttgaactgatacattgtcatgctgacatggttcttcaaaacaaaaaccagaaaaaaaaagaaaaaaggaagaaaaaaaaagagtatatggccggtggttgttggcagattatgtattgttgctgtgaattttaatgctatctcgtgtgatgaagcggtgtttacgttggtgcgtgatgacggtgcagaacatccactgcggggagagcgtgacgatcgaagggcaggcgtacacggtgtctgcggtgacgcaccggtaccagctgcgcaaggggcgctacgagcccagcgagaagcgcctcgacgtcctctccaccggcagatacctcctcaacctctacctcgacggcctcctcgacaagtcctgatctgattagattatgcatctaatctactactactccagtatttacatgagcataccagtacaattaattaaacatcgatcaacttcttttttttgtcatgagagatgtgtatatatgtatctgtaagtaagcactggcactgtaatcgccaacacctgtgtgatggaccaaggatggcgtgctctggatggattcagaggcggagcaacagaaagagact</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0482900, RefSeq:Os04g0482900