Os04g0486950

From RiceWiki
Revision as of 11:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0486950| Description = Malate synthase-like family protein| Version = NM_001187064.1 GI:297723258 GeneID:9268154| Length = 2480 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0486950

Description

Malate synthase-like family protein

Version

NM_001187064.1 GI:297723258 GeneID:9268154

Length

2480 bp

Definition

Oryza sativa Japonica Group Os04g0486950, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24724315..24726794

Sequence Coding Region

24725284..24725679

Expression

GEO Profiles:Os04g0486950

Genome Context

<gbrowseImage1> name=NC_008397:24724315..24726794 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24724315..24726794 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tgcagggaggcgaggatatggaagggggtgttcgagagggcggagaaggaggcggggatagggagggggagcatcagggcgacggtgctggtggagacgctgccggcggtgttccagatggaggagatcctgcacgagctgcgcgaccactcggcggggctcaactgcggccgctgggactacatcttcagctacgtcaagacgttccgcgcccgccccgaccgcctcctccccgaccgcgccctcgtcggcatggcccagcacttcatgcgctcctactcccacctcctcatccagacctgccaccgccgcggcgtccacgccatgggcggcatggtcagtcatcgaaaaaagatcgatccactcgcccgttggagagctcctcgagctagttga</cdnaseq>

Protein Sequence

<aaseq>CREARIWKGVFERAEKEAGIGRGSIRATVLVETLPAVFQMEEIL HELRDHSAGLNCGRWDYIFSYVKTFRARPDRLLPDRALVGMAQHFMRSYSHLLIQTCH RRGVHAMGGMVSHRKKIDPLARWRAPRAS</aaseq>

Gene Sequence

<dnaseqindica>1116..1511#gctctctgcacactcccattttctactcacacttgggatcggtgctcgaacgaattccactcgactgactccatggccaccaacgccgcagcgccgccgtgcccgtgctacgacacgccggagggcgtggacatcctcggccggtacgacccggagttcgcggccatcctcacccgcgactcgctggccttcgtggccggcctgcagcgcgagttccgcggcgccgtccggtacgccatggagcgcaggcgggaggcgcagcggcggtacgacgccggcgagctcccccggttcgacccggccacgaggcccgtccgcgaggcaggcggctgggcgtgcgcccccgtgccgccggccatcgccgaccgcaccgtcgagatcaccggccccgccgagccgcgcaagatggtcatcaacgccctcaactccggcgccaaggtcttcatggtaagcagcacacaactccggcgcgccatcggtgaggatcttgacgtggcgtgagcgtgacgtcgtggttattgtgggtgcaaggctgacttcgaggacgcgctgtcgccgacgtgggagaacctgatgcgcgggcaggtgaacctgcgcgacgcggttgccggcacgatcacctaccgcgacgcggcgcgagggcgggagtacaggctcggcgaccgccccgcgacgctcttcgtgaggccgcgcggctggcacctccccgaggcgcacgtcctcgtcgacggcgagccggccatcggctgcctcgtcgacttcggcctctacttcttccacagccacgccgccttccgctccggccagggcgccgacttcggccccttcttctacctccccaagatggagcactctaggtaagcacgcacaaacacatccatccatggcgcactggcacaaagcttgtgatgatcaagacatgggcatatctaagttcaaattctggctggtacgcaattaataaaaaaaaatagccccgctttcattccacgtttgatacttaaggaaccttgcgtgagggagagtgcttagaatatggagtgaattacctgatttttatcaccaacatacgtttttgggttgaactgatcgatgtatgtaacttttttttttaatgcagggaggcgaggatatggaagggggtgttcgagagggcggagaaggaggcggggatagggagggggagcatcagggcgacggtgctggtggagacgctgccggcggtgttccagatggaggagatcctgcacgagctgcgcgaccactcggcggggctcaactgcggccgctgggactacatcttcagctacgtcaagacgttccgcgcccgccccgaccgcctcctccccgaccgcgccctcgtcggcatggcccagcacttcatgcgctcctactcccacctcctcatccagacctgccaccgccgcggcgtccacgccatgggcggcatggtcagtcatcgaaaaaagatcgatccactcgcccgttggagagctcctcgagctagttgattaaccaaacggttgctgatgtggtgcaggcggcgcagatcccgatcaaggacgacgcggcggcgaacgaggcggcgctggagctggtgcgcaaggacaagctgcgggaggtgcgcgccgggcacgacgggacgtgggcggcgcacccggggctcatcccggcgatccgggaggtgttcgagggacacctcggagggaggccgaaccagatcgacgcggcggctggcgacgccgcccgtgccggcgtcgccgtcacggaggaggacctgctccagccgccgcgcggggcgcgcacggtggagggcctgcgccacaacacgcgcgtcggcgtgcagtacgtcgcggcgtggctatccgggtcgggctccgtgccgctgtacaacctgatggaggacgccgccaccgcggagatcagccgggtgcagaactggcagtggctccggcacggcgcggtgctggacgccggcggcgtggaggtccgggccacgcccgagctgctggcgcgcgtcgtggaggtggagatggcgagggtggaggccgaggtgggcgccgagaggttccggcgcggccggtacgcggaggccggcaggatcttcagccggcagtgcaccgcgccggagctggacgacttcctcacgctcgacgcgtacaacctcatcgtggtgcaccaccccggagcatcgtcgccgtgcaagctctgagagcctgagcacatgtatacctcatcgttgtagctacatataataaggacgaggcttcaaactttactcttagaatacttacatatatatacaaggtggtaataattctctccgtgtaacttctccgagtactttgctcatacttattaagaaaatatttttgtttgatctgtgatctgtgtaagagagaaacagagaacaattcctgtttgtttgcactagaaattctgaaatatcaaatatatcaggttcaccgagaggaaataac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0486950, RefSeq:Os04g0486950