Os04g0489600
| Gene Name |
Os04g0489600 |
|---|---|
| Description |
Basic helix-loop-helix dimerisation region bHLH domain containing protein |
| Version |
NM_001059693.1 GI:115459115 GeneID:4336235 |
| Length |
7743 bp |
| Definition |
Oryza sativa Japonica Group Os04g0489600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:24859733..24867475 |
| Sequence Coding Region |
24859918..24860311,24864997..24865382,24865514..24865636,24866256..24866321,24866464..24866532 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:24859733..24867475 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:24859733..24867475 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaacccggcgccgtcgagggcgccgcagcggcagcagcgcggaggggagatgtcggcgcgctacggcggcgggctgcagttcttcgctgacgccccgccggcgggggtggaggggggcgccgcgaccgcgcggacgttcttcccggtgccgggcgggggaggggagcagcagccgccggagcgcgcgatgaggcagcagcactacggcggcggcgggagtggtgcggccgagatctcgctggggcacggccacggccacggcggcaagcaccatttccatcagttcggcgtcgaggcgaaggacggtggcggcggcggcgaccagtcggggtttctgacgcggcacaacagctcgcctcccgggttcttctcgagccccgtcatggacaacggtttctcatcgagtgctagaccagcaggatcatcactcggtgaggttcgccatggcgccatgagcagcagcagcaacaacaacaagaagatgaaggccccactgagcttcgctagcagcaggcagggctccggcggcctctcccagatatccgaggacggcatcccggacctcactgacagcatccatggcgccgctcatcatcatgggcgctccgaggagaacgtctccacccacgaccacgtcgtccgctccttctcctccggtgggttctcgatcgggtcatgggaggactccaactccatcgtgttctccacgtcgacgggcaaatcaggagcgcacggcaacgacgacatcatcgccacccttagcaactacgaatctcagcttgttgcgcccagggagatggctggcgtagagaaatacctgcagatgcagcacgaccaggtgccattcagagtacgggccaagcgtggatgcgcgacgcacccacggagcatcgcagagagggagagaagaacgaggatcagcgagaagctcaggaagttgcaggccctggtgcccaacatggacaagcaaacgagtacttcagacatgctggacttagcagttgatcacatcaagggactgcagagccagctgcagactctgaaggaagacaaggagaaatgcacctgcagctgcaagcaagcatcaaggaacagaccagccgactaa</cdnaseq> |
| Protein Sequence |
<aaseq>MNPAPSRAPQRQQRGGEMSARYGGGLQFFADAPPAGVEGGAATA RTFFPVPGGGGEQQPPERAMRQQHYGGGGSGAAEISLGHGHGHGGKHHFHQFGVEAKD GGGGGDQSGFLTRHNSSPPGFFSSPVMDNGFSSSARPAGSSLGEVRHGAMSSSSNNNK KMKAPLSFASSRQGSGGLSQISEDGIPDLTDSIHGAAHHHGRSEENVSTHDHVVRSFS SGGFSIGSWEDSNSIVFSTSTGKSGAHGNDDIIATLSNYESQLVAPREMAGVEKYLQM QHDQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLA VDHIKGLQSQLQTLKEDKEKCTCSCKQASRNRPAD</aaseq> |
| Gene Sequence |
<dnaseqindica>186..579#5265..5650#5782..5904#6524..6589#6732..6800#7211..7282#agtcgctcgctcgctcgctggctgactgcgcccgcgcccgctttgctgcgctcccccggcacgcgacgacgaaaagaccggcctcaaaagcgacaccacgcagcagacgcagcgcccccgcgcggagaagctagctaggtactcctgtctggttagctagctagctatagctagaagcctagcacatgaacccggcgccgtcgagggcgccgcagcggcagcagcgcggaggggagatgtcggcgcgctacggcggcgggctgcagttcttcgctgacgccccgccggcgggggtggaggggggcgccgcgaccgcgcggacgttcttcccggtgccgggcgggggaggggagcagcagccgccggagcgcgcgatgaggcagcagcactacggcggcggcgggagtggtgcggccgagatctcgctggggcacggccacggccacggcggcaagcaccatttccatcagttcggcgtcgaggcgaaggacggtggcggcggcggcgaccagtcggggtttctgacgcggcacaacagctcgcctcccgggttcttctcgagccccgtcatggacaacggttactgcactctctgctcacttaattacgtgtaccttcgatttgccgtcttgattcgtctcttccattactatcgagtttggaatgttccaattaaccaccgttcttctttctcttgactcattggagtattccaatttatttctctgtctttatttcttttttttcttcttttactgcgattttttttcttatggtgcgatgtttagtcaagtgtgatcttggttattttttctctcattttcttgatatttgagtgcttttgatgaatgtttctgggtctactgcacaggttacacgtacatcagcagctgtgcaatgtagtcatccaatacatttgcaacagcgccttcatttttctgttatatttacgccgcatgcatgttcattagcagccgcccaccgattagtgcaatattctttcgggggcagcaatattttactccattttatgttgaaaaaaaaggctgtatgatcgttttagtaagggtttagactacaaaacggatgttcgatgctaccaggtttgataaattaaaataaagttcactctatatatctgaaggtagaccggcgccataccctttttatttgccgcaggattttttttcgaggggaaatttgccgcaggcttaatttcgttactgtcgctctgtcgttcatctttgtgttcgttttcaaaataaactcaagtttaccatgaataaaatacttatttgaaaccccaagttccttttcggatcaaaataaattacctacctatgcaaagtgaaatatgatcgataaatcttttgtttgtgatgggttacttttgcaacaaaatcacaatatcgtaagcaaattacttcagcaaaaaatatgcaaatactatttttgtgtgtccggtctacaaacacacatgaagatatattgatatataatcaaagtttgtatataagtataggtgactttgtgtaccctaagaatttcactcattgaccaatattgagagtatagtctcctagctaatctgattctgcaatctgctgatttcaccaactatatccaaacttttgtcttcggtttgtttttgtttatatacgtgatatcttatgggttgctttcaaaccgggtggcttggaataattggatggaaaactacgggctgcacagttacggtggttttctggtgggggcaatgagaaatgggtgggtccttaggattgtataaccacatatgtacacatatgtacgcccacatgcttcttgcacatatttatttattccgaaatatttactaaactatctattttaacatgctattaatatttatttgttttgctgacagcctaacatcactaccatggacctagctactttcctcctctttggttttcaagccgttatacattgcctttacgcgtgtcctatcagccatccactagtttcagaactaacaggataagttgtccttatcttattagactctatttggtgtacgtgtagcatctacccttcactagatataaaactaataaattatacgtacaacttgtttataatgtccattatgcacccttcatatataaaactagtaaaactatgcgtacaccttgtttgaattgtgtacatctatcctatggggaaaagtgcgaagaccttttctaaatattattttttattattgtcctattgaacttcttgtccacttgtaacacatttggtctacattttaagagactatttcttctactcacctatcatttttatagcttctttcgtaataaacagcggcacttgaactaataggataacaacgtacagcctcatgtgtgaacatatacaacagtgtgttgaattatatgcaattcaagttaccttaatttccttatccttgaaaaagaacaaagtcgctttttcttagattttcccatgtctcaagttatgtctggccaagacgacggtaagctataacccgaagaaggttaatcgaattggtgccccacacgctgctatacggctgccgtgtgatgtatagactgattaaccaaggggctggacgacggttcttcgcttgatggtgtattatcgaacgcgcgtaattaagctagcttagctaggttaggcccgctaaccttacacatgaaattaagttctgtcatatcccgtctaggttcagttgatcgatctctctcgcgtgcagacatcagcgaaccaaagtagaggtgatgtcacctcctatatatacatgcgagcaccagacgacgacgatcgaggaataattcattctgggttcattctcactcgctggttgcctggctggggtgagtggaagagtgttgcacgcggcgccaaagccatcaacagtttgacatatctgtccatcgccgtgagatcgatcgtaaacggtaaacctggtctactactatactatacgatgggatccggtggcaacttggtagggatggaggtagaacaaaatagagaagggtatcactcgcttggtttactctactttatatcaagtttagactgatatgtatgcttgagtttaaattgagggggtgcacatacggtgaaaattgataaattatagatatttttttttaaccgggttcctagctaggcatccctctcctagttacctagctccacccctgcaacttggcatgttctatttaagaaactgcattttgataaaaaaaaatgtttcttgcacacttgcgaattgggagtactttgtgtgacaatggggggatatatatatatcgatcgtagattaaactacttgtgtgtgatcaccctccaccgtgcatgcgatgttcgacggcagtacgatttagctagaatgtctagcatgacacattagaatgtctttgatgaacatcacgcatgtgcaagttgattaattgcatacactataatattatattaatatggcacaatacatattacacttagaaagaactttcaattttcgtcctaatttttgccacacataactgaaaacaacaatttgcagtggaaaacgcaatgttttaacaaagacccaatcatatttctaatactattaacatcaaattgtgattatatatatatgattccgtggaaagaaaaatccataaaaaaataaaagaactgaacacaagcccagctagcaccttgaatttcaaaactaggcatgtagcctcttttactttgcaatactccatttgcataatctttggagtgatttgccaatcttcgatcgttgaatcgactatacatgacacacatgtaggcattgtgttggttcttagttgtctcaggagaaaaagggtacaatggagagagataatggaaaatatcttgtactatgtcactcagagcaagtataatagtgagctataagcttactatatacttaggtggaggaaagaggaagtaaaaaatcaagggtgttggctctcatgcaagagctaacttatcacaagctccaagataaatacattaaatatataagtgagagatagagagaagaagaaaattatagccaaacttatagttaatctactatatatattagttttaagataagctaatagtagaaagtgggctctactattattcttgctctcgggcatagccatcttaaagggttatgtagataatattgcaaagctcagagggccaggcgacaactggtttaaatgatcacacaatgcttacttcctaggaactatcaagttgggctcctttacgatgcaagttcttcatttgattggtaattaataacagatggttggcttcggatcggctagtctcttccacagccgagtgcatgccatctttgagatcaaagtgatgaaactatacaacacatacaattgtctctcgtgtcttttgcaagctgtgtgtacttcccttctcttggagatggggttgcgctggggttgcatctcagccaacgacagttcatttttcaggttggtggtgtgtaaagccatcaatgaagtttcaaaagagatgcgcaaaggactaaactcattgattattctagtagcataggagatttggaagaaccgtaacaattgtattttcaaagcttctctaaatgttttggtggtagcacgtgcagtggcaaatgacagtatttgtggtgtttagccggaaactcgagcgctctgtaagctttctttgtatgtaggtcaattaatttggacgactaatgatggctttctgggtaacgagtttatgtgagtgtggccattttaatttgttccttatgtttgtaattatttttcccttttttttatttttctcaatgaaacgaagcacaaacctcctttacttttgagaaagaaaagcttgaagtgttaaacatacttttttttttgcgggagtagtatatagagggtttttttttccattgtggaataagttgctgttgtgtttttcttacaacagtatcatcgtctacttcgaaccgtaagtgctactctctgatgaaccttgtgaaacggatttaaaacacatgcatgcatggaacaagttcatttcccagatgtgcggaccactgctgcatgtttagcatttccaaaaaaaaaaaaaaatctgcttagtcaccaactcacgatttatacatcttcttataacaatatttgtggatatagagatcggattaatgaaacatccattatctaaaaaacatcttcttatggcaataggtttctcatcgagtgctagaccagcaggatcatcactcggtgaggttcgccatggcgccatgagcagcagcagcaacaacaacaagaagatgaaggccccactgagcttcgctagcagcaggcagggctccggcggcctctcccagatatccgaggacggcatcccggacctcactgacagcatccatggcgccgctcatcatcatgggcgctccgaggagaacgtctccacccacgaccacgtcgtccgctccttctcctccggtgggttctcgatcgggtcatgggaggactccaactccatcgtgttctccacgtcgacgggcaaatcaggagcgcacggcaacgacgacatcatcgccacccttagcaactacgaatctcaggtgtatatatatatgcgttttatctttatttttcatttttcgtatttatagtttgatttattagtgtgtgtgtgtacaatgtgagggatgatttcatgtctaatttgtatatacatgcatctgcgatgcagcttgttgcgcccagggagatggctggcgtagagaaatacctgcagatgcagcacgaccaggtgccattcagagtacgggccaagcgtggatgcgcgacgcacccacggagcatcgcagagagggtatgtatagacgacattttcccttgctaattctacgccccatcatagtaccaactttttatgtacgtacgtagcgggtcgaactatatactgtaatgtcaactagcatggaagcgtatcctagatacatagacctttaacgtgtatagtatgcaccgtacatcaaattaacaaatatcataaaaaaattagaaaaaaaatcaatatacatgtatttttagtattatatttacacataaagtcatgtcttcaaattcattacatagatagagcaacaaaaatgataaaattctgatatacttattgtcttaaaactataaaaaaattgttacacctatgatataacaaatttgaggttaagattttacacaaaggtgtagcatttttgaaattataatatgtattttttaaagaattttttgtgatatttgtttgttggtgtgtatagaatttgcatgcgaaacttgtgtgcacatgatatgttaccaaataagaatattgataacctttcaagatgttcttcatatgcatgcatctagccagtagcattcttgttgttcctccttggatcgtgcatgccagattaatcttcaggcatatgatcgatcgatgatgacaggagagaagaacgaggatcagcgagaagctcaggaagttgcaggccctggtgcccaacatggacaaggtgtgtgccatacgtgtgttcttttcatgtatataccagtccttgtctgaactttttcgtcagacaacaatcttcaggttattgagttggagttcaattgatgatctttctaatttgttcttcttacaaattaatgtggcagcaaacgagtacttcagacatgctggacttagcagttgatcacatcaagggactgcagagccagctgcaggtataatgacgtatgcgtgttactaatttgcatgttcagaatggcaaaactgaattgaagccactgctgcctaaagaagcctgataggtcgatgtaccagtccagttacaaagacccccgttagcatcagaatatatatagctagatggaataccaatatattgcactgtaaaacagcagctcagtatgagtaatcaagtatccctccatttcaaaataaatcaacttctattacaaacatagacatagctaaaagttgatttattttgggacggatatgagggagtaacatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataaaagcacaacgcaacccggaaacaacactgagtttttccctgtgtgcagactctgaaggaagacaaggagaaatgcacctgcagctgcaagcaagcatcaaggaacagaccagccgactaaaatgggatgtgaagcaaattgcagtgctggctagtttgatgacatttctccttggtcctcaaaacatgtttgcctggcgacaggaaattaaaggtatagcaggcagcatatagcgtgacaagagcaaagtaatggaggtcatcagtctcttccaaacgaaaggtcgaagtcgtctgatcaaacctttaccagtgaatcgatcagtccagtcttttttcttttgtcagtgtgaccaaccccttttgttgagctgtaaaattaattgaaactagactagaattgttccttcctttaacaaggagctctgctgctctggatgttaggcttctagctgtcctgttgctgtggtaaatagtgattggttcacccagcggttagcaaataatctggttgctggtttcagggtattctccggccaacattagacaagattcagtgatgtgttatgattcatacagatc</dnaseqindica> 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