Os04g0491700

From RiceWiki
Revision as of 11:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0491700| Description = TGF-beta receptor, type I/II extracellular region family protein| Version = NM_001059707.1 GI:115459143 GeneID:433625...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0491700

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001059707.1 GI:115459143 GeneID:4336250

Length

4438 bp

Definition

Oryza sativa Japonica Group Os04g0491700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24965693..24970130

Sequence Coding Region

24966178..24966849,24967034..24967219,24967300..24967407,24968410..24968745,24968825..24968895
,24969414..24969561

Expression

GEO Profiles:Os04g0491700

Genome Context

<gbrowseImage1> name=NC_008397:24965693..24970130 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24965693..24970130 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgatcgatttgtccatgcccgggagctccgggctcctggacgacgtaggggggaagaagcacatgaatttcttcagcaaccgctacgtgctcgcgctcacgggcgccgcaggaatcggcgggttcctctttggctacgacacaggtgtcatatctggagcccttttgtatattcgggatgactttccagcagtcagagacaattatttcttacaggagacaatcgttagcatggcattggtaggagccatcattggagcagctggcggcggctggatcaatgatacatacggccgtaggaagtctactcttgtggctgacatgctgtttgcacttggctcacttgttatgtgtgctgctggtggtccttacattctgattcttggaaggcttcttgttggcttgggtgtgggtatagcatcagtcacagcgccagtttacattgctgaagctgctccttcggaaattaggggaggtttggtgtcaactaatgtactcatgattactggtggtcaattcttctcctacctcatcaatcttggctttactgaggttcctggaacatggcgctggatgctcggagttgctgctgtgcctgcaattctacagtttgttctgatgctttttttgccagaatctccccgttggcttttctggaaggatgagaaagcaaaagctatttctgtcctagagaagatttatgactctgaccgtctagaggaagaggtagagcttcttgcttcttcttcaatgcatgaatttcagtctgatggtactgggagctatttggacattttcaagtcaaaggaactaaggctagcattttttgctggagctggtcttcaggcgttccagcaatttactggcatcaacactgtcatgtactacagcccaacaattgtccagatggctgggtttacctccaacaagttggcattgctcctttccctcatagtcgctggtatgaatgccgctgggaccattgttggaatctacctgattgaccgctgtggccggcgtcgcctggcccttacaagcttggctggtgtggtggtctccctcgccatcctagcaatggccttcatactgcagtcatcatcagatatctgttcgaatgcactcaatggtgcctgccaaggtgcactgggatggttcgcggtggcgggactcgctctatacatcgccttcttctccccaggcatggggccagttccatgggcagtgaactccgagatctaccccgaggcataccgtggaatgtgtggtggcatgtcagccactgtcaactgggtatctaacctgattgtggcacaaacattcctctcgatcgtcgggttggttgggaccggcctgaccttcctgatcatcgccggaatagcggtgctggccttcatcttcgtggctctctacgtgccggagactaaaggcctcagctttgagcaggttgagctcctgtggaaggagagagcatggggaaaccagggcaatcgccagagccttttgggcgctgcaccgtag</cdnaseq>

Protein Sequence

<aaseq>MTIDLSMPGSSGLLDDVGGKKHMNFFSNRYVLALTGAAGIGGFL FGYDTGVISGALLYIRDDFPAVRDNYFLQETIVSMALVGAIIGAAGGGWINDTYGRRK STLVADMLFALGSLVMCAAGGPYILILGRLLVGLGVGIASVTAPVYIAEAAPSEIRGG LVSTNVLMITGGQFFSYLINLGFTEVPGTWRWMLGVAAVPAILQFVLMLFLPESPRWL FWKDEKAKAISVLEKIYDSDRLEEEVELLASSSMHEFQSDGTGSYLDIFKSKELRLAF FAGAGLQAFQQFTGINTVMYYSPTIVQMAGFTSNKLALLLSLIVAGMNAAGTIVGIYL IDRCGRRRLALTSLAGVVVSLAILAMAFILQSSSDICSNALNGACQGALGWFAVAGLA LYIAFFSPGMGPVPWAVNSEIYPEAYRGMCGGMSATVNWVSNLIVAQTFLSIVGLVGT GLTFLIIAGIAVLAFIFVALYVPETKGLSFEQVELLWKERAWGNQGNRQSLLGAAP</aaseq>

Gene Sequence

<dnaseqindica>3282..3953#2912..3097#2724..2831#1386..1721#1236..1306#570..717#cgaagcgtatcggcttcatcgccaatcgatgatgcgacgatgctgatctgatcatctgaacccaacaaaatttctccttcaaaacctgcaagctcaccttcttctcccccagctctctcctccgatcatttgcccaaccaccacccagcccgccagccgtgcgagcgcagctttcctatttaagccgcgcctcgctggctcgctgccgctgcccctgcctcttccccgaatgctggtctctcgtcgccccgtcccctggaatctctccctttctaccttggtccgggaccgcggctcctgaaatctctctctgtccctagaaatttctgcgcgcgtcttccgttcttctccccggtttggttggttcccgagcctgtgacctcgggggcggccgaaaggttggattttgtagagcaggctttacttgcatctgggcaaagattggattttttttgtggagcgattttggggtcgttgttttttggtgcttgtttgctgaagtttggattttgggaggagtttggggggggggggggggggttcggtcagatttggtgggagcggagggcatgacgatcgatttgtccatgcccgggagctccgggctcctggacgacgtaggggggaagaagcacatgaatttcttcagcaaccgctacgtgctcgcgctcacgggcgccgcaggaatcggcgggttcctctttggctacgacacaggtatatggttgcatgtgtgccatttaccttccaacttttgcctgaacgtttcatcaagtgtagctgttctcgatgaatttcccctcgcagtaataagcgacatgtttttggttgctttggacttgttgggttacttcattttcatatgatgaaacattcagatggtgtttggtccaatttgatatttgacagtatgttcaggaagcctatggttagatatcattgatacaaacaaacaaagtttgaagtggaagtctgaaatgagatttatgaatagtggacttattttgttgagttcgtgctatgatctctacagtactgcataaagatagatattaattttagcagcgggatgaaatcaatgcttgcatcattcttattaatttctagcaaaatcttcgagtgtgtgtaacttcacagaattactgtactgtatacttttgccaaaaaaaaaaaagaaaagaagagaagacagtatgataaatttgtgctcttagctaagaaatttattctatcaggtgtcatatctggagcccttttgtatattcgggatgactttccagcagtcagagacaattatttcttacaggttcaatctaatctagtacaaattactggtcattaaccatatggcacgcctgcaccaactgattttggttcttccgtaggagacaatcgttagcatggcattggtaggagccatcattggagcagctggcggcggctggatcaatgatacatacggccgtaggaagtctactcttgtggctgacatgctgtttgcacttggctcacttgttatgtgtgctgctggtggtccttacattctgattcttggaaggcttcttgttggcttgggtgtgggtatagcatcagtcacagcgccagtttacattgctgaagctgctccttcggaaattaggggaggtttggtgtcaactaatgtactcatgattactggtggtcaattcttctcctacctcatcaatcttggctttactgaggtagacattcaacctccatttaattagcatattttattccattattcctacacattagcagttttcagtttaagttcttttaacattcaactataaacggaacaagttcaagctgaaaacattgcagttgaaatttttttattgagcttccacaaaccaggtcttgcactgccatggggaacttaactgttaactgcaactaagtatatatatgagctcgcatcatatctttaatgaaaaaataacaagcttggggtcggtactcttgcacaagaaccatggaaaagctgcacatgttatgttattcaagatgaactcccttgagaaaggatttcagcatcaatgccatgtttatactacctttttctccttttcatatatttaccttttatggtattaacattcctgttggtgctagttaactgtgtaacacttaattagcaatgaacaagagtcagcttccttgccagcagcaatggatgaatcaccaacaaggtgttgtttggtgcgtagccactctagtgttaatgctccatctttctgtttctgaaattcactgcagtatatacatcattctgttttcttttttcttaaatgaacttcctgtatttatctgaaatgcacattttatcccttggcacatcatatgattttgtgatttcagtagcctattcactgtttgttcttgaagtaccactttacttacctgaggatgaaaaattatgtgtcatttgaatcaaataattcagtcaagtagaaccttataaagcaatgaccaacaatattaaattatcattgtgcgtctccttataatttgacttggggtttcataatcttgatgcataacaaatcctgcattattagaaaacaatataagatgtcctataaaagaagatatacaaccatctttcttgagagttatagtggagatattcgtaagctggtaatacattagtacgagtagttgcaaacttgcaatgatatgcatgctacatgtcataggttcctggaacatggcgctggatgctcggagttgctgctgtgcctgcaattctacagtttgttctgatgctttttttgccagaatctccccgttggcttttctggaaggttatattttaagcttttattcagtcatgtattatctccttttatctgcattttgttgttacattaacttttctttacaggatgagaaagcaaaagctatttctgtcctagagaagatttatgactctgaccgtctagaggaagaggtagagcttcttgcttcttcttcaatgcatgaatttcagtctgatggtactgggagctatttggacattttcaagtcaaaggaactaaggctagcattttttgctggagctggtcttcaggtatgttcatcatctagcattctagcccactcattttaggtatgtcttagtcccttagactcttagtcaccagggagataaacggttcactgtgctaagtgcattcctcaaggagcatttgatttatgcatcctgttggtaactacatggagttttctcccctaagacatgttaatctgtgcaggcgttccagcaatttactggcatcaacactgtcatgtactacagcccaacaattgtccagatggctgggtttacctccaacaagttggcattgctcctttccctcatagtcgctggtatgaatgccgctgggaccattgttggaatctacctgattgaccgctgtggccggcgtcgcctggcccttacaagcttggctggtgtggtggtctccctcgccatcctagcaatggccttcatactgcagtcatcatcagatatctgttcgaatgcactcaatggtgcctgccaaggtgcactgggatggttcgcggtggcgggactcgctctatacatcgccttcttctccccaggcatggggccagttccatgggcagtgaactccgagatctaccccgaggcataccgtggaatgtgtggtggcatgtcagccactgtcaactgggtatctaacctgattgtggcacaaacattcctctcgatcgtcgggttggttgggaccggcctgaccttcctgatcatcgccggaatagcggtgctggccttcatcttcgtggctctctacgtgccggagactaaaggcctcagctttgagcaggttgagctcctgtggaaggagagagcatggggaaaccagggcaatcgccagagccttttgggcgctgcaccgtagtgagccagctctcatcctgcttgcccttgctggcaagggtcggtggctggctccctttttaagatggccgtgccaccctcagtttctatcggctctctctagctgggaagttttaggaagatctggatgcagaccaaattttattacgtggtagcgactagatcattgttctgtcacctggcatgtattgtcaatttctcatggtggaaactgggataatttcagcattgggtgggtgaagaatcaggttgtgttggtgtcgaatcttgtatacatgggaaggactgtacgagctatactggttgtgcattgccgtcacaagtgtatagttccggtgctagatgtgccggggagacggttaaaaacctgttatggacagaaacaggaatgaaaattatcgctttaatattcttgctcgttattcctccaccaggtgtatctgacttggcaaaccttgagagttatatgcagatgatgtattttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0491700, RefSeq:Os04g0491700