Os04g0491200

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Revision as of 11:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0491200| Description = TGF-beta receptor, type I/II extracellular region family protein| Version = NM_001059705.2 GI:297602966 GeneID:433624...")
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Gene Name

Os04g0491200

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001059705.2 GI:297602966 GeneID:4336248

Length

6013 bp

Definition

Oryza sativa Japonica Group Os04g0491200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24945344..24951356

Sequence Coding Region

24945344..24946178,24946310..24946446,24946552..24946992,24949574..24950318,24950525..24950649
,24951072..24951356

Expression

GEO Profiles:Os04g0491200

Genome Context

<gbrowseImage1> name=NC_008397:24945344..24951356 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24945344..24951356 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcgattgcgtaccagcccttggtgaagatcagttcagcaatgatgatccagaagcatcgcatctcaggagtaacttcttaagctggctcaagtctgcaaactctcttggagcacttattggattggtattcctagtgtggatcgagaagaatctgggttgggacattggctttttgttgtgtgcccttattgttattgtagggctgctcatagcagccagtggactgcctttctatggaatgcgcaagctcaatggaagtcctctaactagaatattgcaggttcttgtcacatcatcaaagaagaggcaggctgctgttattcatgttattgagctgcaagagatcagtacatcagatcatgtagatgaggacggggaagacaaatgtgacagcaaaaatatttgcactactcgagttgatgagaaaacagaggctattactcggatgcttccaatcttcatcagctgcatattcgcctacttgcccttcacattgctcatgacgttaaccatacaggttggcagcacgatggactcagggataggaatgatccagataccctctgcctctctcatcgcaatcccaacaacatttcacatgctgatgcaaccgtgctacaggagaatcttgataccactgctgaggatattcacaggccacaccaatggtatcacccctctgcagcacatcggtgttgcctctgcgtgtgggataatggcagcatgcattgccatgttggtggaagcaaagaggttgatggtcgtggagcagcaagggctaacattagtagctgacggtgtcccaatgtccgtcttctggctggtgatgcagttcttcctgctaagcatcatggatatagcatatattggtgggctggttcagttcataaagagcgaggcacctgaagcaaagcatattgcaccagcagtgcagtctcttctggtcggaatagcagcctggtcaggatgtgcctttgtccagctcgtcaacagaatgacaaggcttggagacaatggaagaggatggttagatggaacaaacttcaacaggacacgccttgatcgcttcttcttgttattggcaaccttcgagctggtggcatttatcaattatgcattctgggctaggagatatgccaacaagaaaaggggctacggtttgctcgcactgcaagcttaccttccctctctccgtccaccgccttgcaacgcggaagcagaggcaagcagctgcagagaagtccatggcaggaatgccgtcctactttacgcagcgctgtacatcagcgcttttggcgatggcttcatgcgtgcttgtatgccgcccctcggagcagaccagttcgaccatgaagacccctccgagtcccgccagcagtccagcttcttcaactggtacaccttcggaatctcctttgggggtttcataggattgatcctcatagtttggctggagaacagcaaagggtgggatgtcgggtttggggtgtgcgcgttcctgatcctgcttgggctgcttgtggttgctgctggtctccctttgtaccgcaaccatgtacccgaaggaagtccgctaactcggatactccaggttcttgtggttgcattcaagaacaggaagcttcaacttcctgagaagctggaagaagcacaggaagaaagaagcactgagcaaggaggctctactgaagtaactgaaatagcttctcaaacaaacagtagtctgaaattccttgacaaagcttgcatcaatggaggcaaagacggggcctggtcagtctgcagcacgaagaacgtggaggagacaaaggccgtgctccgcgtgctccccgtcttcatcagctccctgatcggctacatgtcgaacccgctcctcttcaccttcaccgtgcagcagggcggcttgaccaacacccggctggggaggatccacgtctcgccggcgacgctcttcatcatccccagcgcgttccagatggcgctgctcccggtgtacgaccgcttcctcgtgccgctcctgcggcggcgcacgggctacgccagcggcgtcacccacctgcagcgcgtcggcgccgggttcgccgccgtgatcctggcgtcggccatcgccgccgtcgtggagaggaagcggcgggccgacgccgcggcggcggggcagatgtcgctgttctggctggcgccacagttcttcctgctcggcgtctccgacgtgacgtcgttcccgggcctcctcgagctcttcagcagcgaggcgccccgtggcatgaagtccatcgcgtcggcgctgttctggtgcgagctcggcctctcgtcgtggctcgccacgctgctggtgcaggtggtgaacagggccacgaggcggcacggcggcggcggcggcggcgggtggctcgagggcgccaccctcaacaccagccgcctcgacctcttctactgggtcgtcgccgccgtcgggctgcttggcttcgtcaactacctctactgggcgagcaggtacatataccggcaagacccacgcgtcgtcgtcgacgtcgagccatcggcggatcacgattcaccttga</cdnaseq>

Protein Sequence

<aaseq>MRDCVPALGEDQFSNDDPEASHLRSNFLSWLKSANSLGALIGLV FLVWIEKNLGWDIGFLLCALIVIVGLLIAASGLPFYGMRKLNGSPLTRILQVLVTSSK KRQAAVIHVIELQEISTSDHVDEDGEDKCDSKNICTTRVDEKTEAITRMLPIFISCIF AYLPFTLLMTLTIQVGSTMDSGIGMIQIPSASLIAIPTTFHMLMQPCYRRILIPLLRI FTGHTNGITPLQHIGVASACGIMAACIAMLVEAKRLMVVEQQGLTLVADGVPMSVFWL VMQFFLLSIMDIAYIGGLVQFIKSEAPEAKHIAPAVQSLLVGIAAWSGCAFVQLVNRM TRLGDNGRGWLDGTNFNRTRLDRFFLLLATFELVAFINYAFWARRYANKKRGYGLLAL QAYLPSLRPPPCNAEAEASSCREVHGRNAVLLYAALYISAFGDGFMRACMPPLGADQF DHEDPSESRQQSSFFNWYTFGISFGGFIGLILIVWLENSKGWDVGFGVCAFLILLGLL VVAAGLPLYRNHVPEGSPLTRILQVLVVAFKNRKLQLPEKLEEAQEERSTEQGGSTEV TEIASQTNSSLKFLDKACINGGKDGAWSVCSTKNVEETKAVLRVLPVFISSLIGYMSN PLLFTFTVQQGGLTNTRLGRIHVSPATLFIIPSAFQMALLPVYDRFLVPLLRRRTGYA SGVTHLQRVGAGFAAVILASAIAAVVERKRRADAAAAGQMSLFWLAPQFFLLGVSDVT SFPGLLELFSSEAPRGMKSIASALFWCELGLSSWLATLLVQVVNRATRRHGGGGGGGW LEGATLNTSRLDLFYWVVAAVGLLGFVNYLYWASRYIYRQDPRVVVDVEPSADHDSP</aaseq>

Gene Sequence

<dnaseqindica>5179..6013#4911..5047#4365..4805#1039..1783#708..832#1..285#atgcgcgattgcgtaccagcccttggtgaagatcagttcagcaatgatgatccagaagcatcgcatctcaggagtaacttcttaagctggctcaagtctgcaaactctcttggagcacttattggattggtattcctagtgtggatcgagaagaatctgggttgggacattggctttttgttgtgtgcccttattgttattgtagggctgctcatagcagccagtggactgcctttctatggaatgcgcaagctcaatggaagtcctctaactagaatattgcaggtaaaaaatcatatgccacaattatatacgtttgtcggtctaatttggtatgcatgttaattataacgaatttgtgtatgattgatttattttgacgccaactggttagtgttgctttatattatccacgatccattttgtggaagtcaaatatatacaagaaggatgctgttatccaagttatgttttatactcttttgtctgatagcattacattgcattattctaccttccatgcttattgctggaaagtcaccatgcctatttctagaaatttcagataacagattaattacaagcaataaagaaattagggcagtccttccacacatcaatctaaaacaaaattgaatgtagcaagacaaagcaaggaaaacagaagatcatattgttttgaagttgtattactggtacctttccaggttcttgtcacatcatcaaagaagaggcaggctgctgttattcatgttattgagctgcaagagatcagtacatcagatcatgtagatgaggacggggaagacaaatgtgacagcaaaaatatttggtaagttccctgataataaaaaaatccccagaaaacaatgtatttctgaaaacaatgtatgaacttttaacttttaaataaatgttgagaaccaagagtataataattcctatttttgtggaaatcataatctccataataccctaatatatttgtggacaaatcctgaatacatgacgggaaaaaacaatttgtattttctgcagcactactcgagttgatgagaaaacagaggctattactcggatgcttccaatcttcatcagctgcatattcgcctacttgcccttcacattgctcatgacgttaaccatacaggttggcagcacgatggactcagggataggaatgatccagataccctctgcctctctcatcgcaatcccaacaacatttcacatgctgatgcaaccgtgctacaggagaatcttgataccactgctgaggatattcacaggccacaccaatggtatcacccctctgcagcacatcggtgttgcctctgcgtgtgggataatggcagcatgcattgccatgttggtggaagcaaagaggttgatggtcgtggagcagcaagggctaacattagtagctgacggtgtcccaatgtccgtcttctggctggtgatgcagttcttcctgctaagcatcatggatatagcatatattggtgggctggttcagttcataaagagcgaggcacctgaagcaaagcatattgcaccagcagtgcagtctcttctggtcggaatagcagcctggtcaggatgtgcctttgtccagctcgtcaacagaatgacaaggcttggagacaatggaagaggatggttagatggaacaaacttcaacaggacacgccttgatcgcttcttcttgttattggcaaccttcgagctggtggcatttatcaattatgcattctgggctaggagatatgccaacaagaaaagggtcagtactgttagatcagacggcgacaattttggagcttaaagatccaaacagtatgcaatagataggtaagagaaaacaaagagttgtgattaattttcttttgttagcctgtctgtgttgtatagatcgtaacaaagatatcctataatctccattggcttatggcagcttgacagaacttacaagttacaatcaatgcaatctagcgtacagtgatgttatctctatctgtcgctatcttgcaaggccagaaaatagattttcaatattgaaagtagttgcgtaaactgtgtcttaggaagaacatcaatatttgtggtacctaaactgatgactaacaaggtttgtaaaaatagtatagctgactagtttactgaagaatgagagtatgtactgtactgacataaaagtatcatttctgcttggtcttcaagcttcaattatgtcatgtcataataaaaatatgtaattttatactaagaatgaaaagttgaaaacattgtgctcaatgaatgccttccaatgaaacaaggatgtcagcaggacaccacaaaccttagcagaaaattatatttgtttctttcaaattgaaaccaatcaacaatacaaagaagttgattttctctgtatatgtgttgcatgctcgaagttcagcttgatgaaatttaattgcttttggacaatcacccattcagctgccaatggacaagtaaatcattgttttagccaccatgacctctctaatctagtatggttaagggtgtggttgaatttgaaaccttttctttttgctactgatgtgcatttcagacaatctgtattaattgcatcggcccatgattaaaaataatagctactccctatgctccctttcacttgacactagatactattcatgtacaaactttgaccattcgtcttttttataaaaaatatttaaaaatatttaaggagatattatattatcaaagtactttgcatgttaaatataattaactacttgcattcatcaaaacatcataacttaaaagtttttattggtcaaagataaaatcaaacttgtaaacagtgtcaagtaaaagggaataatgggagtagcaaatatgttttggttatcttttttaaccaataatttttagggttttaggttttaatttctcttgtttatacttttcatatgcgtatcctgttcgagctgatgccatctccttgaagacgcattgtagagtagtggatgcttagattaaaaggtaaaaccacaattgggttgttccatgatggttaatatggaggaaatcaactgtaagttacaaacctgagttttggactgataatcaagagtaatagtaggttaacctaattggtagagtttattatgtaactcatgcataagcatttcgtgctcataatttgagcagcaatgattctcataggaagcgtctttaaagacgacttctcagaccaattaataaattaagagcttagtttcaagatagtccagaatgatggcttggacttgaagacatgcattttatctaagatatttgtacatcagtgtcaatgcatgccagtgacagattgcttaaaaaaattgtcaggatacacctccatattttggttagtagggagtaggaactctgaatctgatagtcaactttagtgttggactgttggtgcttgcaagtggtaggtgacggctatactattcaagaatatttttttgtcattttgtttttctgacttcttcaaatttgacttatccatctgtgatcaatacccctgggtcctgagtccctgacttcaactgtctatctactatgatttatacccccttatgctgcaatggccaggcagtaatcaagagagaaatatttgaactcatcagaaatatttgaactcatcagaaaaaccatggcagtcggaggctttttggactggaggggaaatcctattaatagaaaggtgcatggaggagtcagagcagcatggtttgtatattgtaagtgattgccagttgacttgctttatccatgtttcctgaattatgtgattttgtctagttactagtaatatgcagacatgtgacgagttactctttccatttcaagcttcttttctttctttaaatcgctgaagcattttatacatgtttcgatctcttacagttctgactgtggtgacaagcacagtcaatgtcccaaacatgctgaatatggttacctatctctatggaacaatgcatatgggaatctcaagctcttcaactacagtcactaatgttcttggtgccacatctgggtttgctctgttaggagctttcctctcagactcttacataactcgagctagaacaatactcctctttggtccattggaatttttggtaattcgctttttggtttactcaactatctacatcaagcctaatatgatcaaaggaaactatttttgtttaattctccgttgccaattactgtgcgcaaacctaccaataataaagaaattggcatttttttctggtaatctgcttcttggtctattcaaccatctaacgaattattggcaatcatatatgcagggctacggtttgctcgcactgcaagcttaccttccctctctccgtccaccgccttgcaacgcggaagcagaggcaagcagctgcagagaagtccatggcaggaatgccgtcctactttacgcagcgctgtacatcagcgcttttggcgatggcttcatgcgtgcttgtatgccgcccctcggagcagaccagttcgaccatgaagacccctccgagtcccgccagcagtccagcttcttcaactggtacaccttcggaatctcctttgggggtttcataggattgatcctcatagtttggctggagaacagcaaagggtgggatgtcgggtttggggtgtgcgcgttcctgatcctgcttgggctgcttgtggttgctgctggtctccctttgtaccgcaaccatgtacccgaaggaagtccgctaactcggatactccaggtaggttgtgctccttgttgggtcaaaacatgatgtcaacatcaattctcaagaaaagagatcctgtgcatgttagttgactgcattctgatctatctatcccaggttcttgtggttgcattcaagaacaggaagcttcaacttcctgagaagctggaagaagcacaggaagaaagaagcactgagcaaggaggctctactgaagtaactgaaatagcttctcaaacaaacagtagtctgaagtatgttcaacgaaatactgagtactttttctagactactttgaatacaaagcagaaaatattggcaattgagcattgtcctcttggcagagtgcaatactaaaattttgtctttgcatgcatcttggcagattccttgacaaagcttgcatcaatggaggcaaagacggggcctggtcagtctgcagcacgaagaacgtggaggagacaaaggccgtgctccgcgtgctccccgtcttcatcagctccctgatcggctacatgtcgaacccgctcctcttcaccttcaccgtgcagcagggcggcttgaccaacacccggctggggaggatccacgtctcgccggcgacgctcttcatcatccccagcgcgttccagatggcgctgctcccggtgtacgaccgcttcctcgtgccgctcctgcggcggcgcacgggctacgccagcggcgtcacccacctgcagcgcgtcggcgccgggttcgccgccgtgatcctggcgtcggccatcgccgccgtcgtggagaggaagcggcgggccgacgccgcggcggcggggcagatgtcgctgttctggctggcgccacagttcttcctgctcggcgtctccgacgtgacgtcgttcccgggcctcctcgagctcttcagcagcgaggcgccccgtggcatgaagtccatcgcgtcggcgctgttctggtgcgagctcggcctctcgtcgtggctcgccacgctgctggtgcaggtggtgaacagggccacgaggcggcacggcggcggcggcggcggcgggtggctcgagggcgccaccctcaacaccagccgcctcgacctcttctactgggtcgtcgccgccgtcgggctgcttggcttcgtcaactacctctactgggcgagcaggtacatataccggcaagacccacgcgtcgtcgtcgacgtcgagccatcggcggatcacgattcaccttga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0491200, RefSeq:Os04g0491200