Os04g0492100

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Revision as of 11:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0492100| Description = Similar to ARIADNE-like protein| Version = NM_001059709.1 GI:115459147 GeneID:4336253| Length = 3770 bp| Definition...")
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Gene Name

Os04g0492100

Description

Similar to ARIADNE-like protein

Version

NM_001059709.1 GI:115459147 GeneID:4336253

Length

3770 bp

Definition

Oryza sativa Japonica Group Os04g0492100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24983490..24987259

Sequence Coding Region

24983490..24983531,24983865..24983955,24984046..24984218,24984556..24984660,24984733..24984821
,24985106..24985213,24985300..24985390,24985480..24985569,24985697..24985744
,24985914..24985985,24986067..24986166,24986250..24986376,24986558..24986840

Expression

GEO Profiles:Os04g0492100

Genome Context

<gbrowseImage1> name=NC_008397:24983490..24987259 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24983490..24987259 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggttttccggaaaagctcatcgaaatgccaaatgacagagaattgacatgtggaatttgtttcgaaaattgtcctcgtacgtcaatgagtgctgctgcatgtggccatccgttctgtagtgcatgttggagaggttatattagcacttctataaatgatggtccaggatgcttgatgttaagatgtcctgatccgtcctgcacagctgctgttggtcaagatatgatcaattcactggctgatgacgaggatagggaaaagtatgggcgatatcttcgcagatcttacattgaagataataggaagacaaaatggtgtcctgctcctggatgtgaatatgctgtagaatttgtcatgggcagtggtagctatgatgtgaactgcaactgttcatacggcttttgttggaactgcactgaggaagctcatcgtccggtagactgtgccactgtttcaaagtggatcctcaagaacagtgcggagtctgaaaatatgaactggattctagctaattcaaagccttgtcctaagtgcaagcggcccattgaaaaaaaccagggatgcatgcacattacatgcacacctccatgcaaatttgagttttgctggctgtgtcttggtccatggtcggagcatggagaacggactggtggattttatgcctgtaaccgttatgaggcagcaaggcaggaaggagcgtatgatgaatctgaaaggagaagagaaatggcaaagaactcgcttgagagatatacacactattatgaacggtgggcagccaatcagtcgtcgaggcaaaaggcattaggagatctgctgagtttgcaaaacgacaagcttgaaaagttaagtgatatacaaagccaaccagagtcacagctcaagttcatcatagaggcttggttacagattgtcgaatgtaggagggtattgaagtggacttatgcttatggtttttacctcccagagcatgaacatgccaaaagacagttctttgaatatctgcaaggtgaggcggaatcaggtttggagcggctgcatcaatgtgcagagaaagaacttcaagtataccttgaagcagaatctccctcaaaagatttcaatgacttccgtacaaagttggctggattaactagtgtgactcgcaattatttcgagaaccttgtccgggctttggagactggattaaatgatgtaggtccttccactagccatggtacatgcagcaagagcgcaacttcgaagagtcttggcagtaaaagtaagagtagcaagagcagagcatccagtaccagctccaaaacaggtggctcgagccgtggtgtcgatgaaagcaacatttggacgtgtgaccagtgcacatatgctaaccccagatctgccagaaactgccaggcttgtaacaaccagcatcgatag</cdnaseq>

Protein Sequence

<aaseq>GFPEKLIEMPNDRELTCGICFENCPRTSMSAAACGHPFCSACWR GYISTSINDGPGCLMLRCPDPSCTAAVGQDMINSLADDEDREKYGRYLRRSYIEDNRK TKWCPAPGCEYAVEFVMGSGSYDVNCNCSYGFCWNCTEEAHRPVDCATVSKWILKNSA ESENMNWILANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGPWSEHGERTGG FYACNRYEAARQEGAYDESERRREMAKNSLERYTHYYERWAANQSSRQKALGDLLSLQ NDKLEKLSDIQSQPESQLKFIIEAWLQIVECRRVLKWTYAYGFYLPEHEHAKRQFFEY LQGEAESGLERLHQCAEKELQVYLEAESPSKDFNDFRTKLAGLTSVTRNYFENLVRAL ETGLNDVGPSTSHGTCSKSATSKSLGSKSKSSKSRASSTSSKTGGSSRGVDESNIWTC DQCTYANPRSARNCQACNNQHR</aaseq>

Gene Sequence

<dnaseqindica>1..42#376..466#557..729#1067..1171#1244..1332#1617..1724#1811..1901#1991..2080#2208..2255#2425..2496#2578..2677#2761..2887#3069..3351#ggttttccggaaaagctcatcgaaatgccaaatgacagagaagtatgcctttgccttactagttaaacaattaaaaactttgggggatgtacaaacaatttgaagttctagcagttgtatgcctgcgagccaggattttttgagaaaaaaatggatagtatgcttgtgtcatgcagtacacatgtattggcactcagttttgcctgtactatagtgctatacattgtgacttgtgagttgtgggaagaatgtgcatcaaacatttcatatctcattttttctcttgcctgtttgtgatggtttttacctgtcattacttagaacacatgaatatcatcagctgttcaatactaatacattttgttcacttgacagttgacatgtggaatttgtttcgaaaattgtcctcgtacgtcaatgagtgctgctgcatgtggccatccgttctgtagtgcatgttggagaggtttgacaatctaaccttgagatatttctctttatcaaccccggattctgttttgtgtgggatcaccacttacatagtgcacattgacaggttatattagcacttctataaatgatggtccaggatgcttgatgttaagatgtcctgatccgtcctgcacagctgctgttggtcaagatatgatcaattcactggctgatgacgaggatagggaaaagtatgggcgatatcttcgcagatcttacattgaagataataggaaggtaggttgatcataatacaaatgaataaatgaaaatctgtatggctgctactgtgaattattatatgttttatgtaaaccagccattctcctgcctttgcatcttgtttttcctaaaaatggagtgaactctctgtattttgaataaaccttgatgttcttacagttaatgtggcaatcataatatatttttgaaatggtgctgacagtttgtaattagtgtgaatgccttcataggaaatgatcaagtgctatatttggccaattctcaagttttggtatttatgtatctatttttttaagcatatgttcattaagttcattcctatttggaacagacaaaatggtgtcctgctcctggatgtgaatatgctgtagaatttgtcatgggcagtggtagctatgatgtgaactgcaactgttcatacggcttttgttggaacgtgagtactggacctgccatttcatttcattgtgatcagcagggcataaaccatttgaaataaaatttgcagtgcactgaggaagctcatcgtccggtagactgtgccactgtttcaaagtggatcctcaagaacagtgcggagtctgaaaatatgaactggtattgtcagaataacacagctttctttttcattactactgacatttttcttattgtaagttttgttcctttaattgcatttgatctttcttctgaaaactttgtcctaatctcattcctccttttggttctgaaaacttttgctattttattgtttggtgattttctgaaacaccaatattttgactttatttttttgtcatattagtagtagttcttatgtttttactgcaagttatttcttgtgtcaactatgttgaactttctgttggttatggtttcaggattctagctaattcaaagccttgtcctaagtgcaagcggcccattgaaaaaaaccagggatgcatgcacattacatgcacacctccatgcaaatttgagttttgctggtatgtaatcataatctctctgtttatgctcttcatagcacttgcagtctcatatggcttgtatgtacttgttctatataacgcaggctgtgtcttggtccatggtcggagcatggagaacggactggtggattttatgcctgtaaccgttatgaggcagcaaggcaggaaggagcggtacagttctaatctgagatattttcttaatactttattatttttatttaatattgtggttaatttgtgctgcttcgcactggttacagtatgatgaatctgaaaggagaagagaaatggcaaagaactcgcttgagagatatacacactattatgaacggtgggcagccaatcagtcggtaagttattgggtacaagaaaagttacctgaacaaagcattgtgttttacataagtagtaaaaaagatttccaatcaatactcaagaagaacttttctggtttcttaatatcttctcgttatgcagtcgaggcaaaaggcattaggagatctgctgagtttgcaaaacgacaaggtatataaatatgatactttatatttatctctcctttatcctctttatatccaatttcacccaaaagtactgaagccatgttaggttcatgtattaatcatttataatacagctactccagcctgtccagaacatatgctaacagcgacattcacaaatcatttttcagcttgaaaagttaagtgatatacaaagccaaccagagtcacagctcaagttcatcatagaggcttggttacaggttagttttcattgccaagtttagttctctcataagcctcctagatctctcatgggcgagtttaataatttcaatacgcagattgtcgaatgtaggagggtattgaagtggacttatgcttatggtttttacctcccagagcatgaacatgccaaaagacagttctttgaatatctgcaaggttcgtagttttgctgtaatactaaatagcatacgcaagtatcagttacttatctggtttattcttgttgcttatttatctaggtgaggcggaatcaggtttggagcggctgcatcaatgtgcagagaaagaacttcaagtataccttgaagcagaatctccctcaaaagatttcaatgacttccgtacaaagttggctggattaactaggtactacagatcattctgtttttcatgtttcctatccttattactcggatgcttgtgtcctttggaaggttttctttgattgttttgacgacatgatcactcctaattgtaaaaagatgatcatttaaatttcgtttgtttgtactatatcttcatctgaagttctctctttatttgacagtgtgactcgcaattatttcgagaaccttgtccgggctttggagactggattaaatgatgtaggtccttccactagccatggtacatgcagcaagagcgcaacttcgaagagtcttggcagtaaaagtaagagtagcaagagcagagcatccagtaccagctccaaaacaggtggctcgagccgtggtgtcgatgaaagcaacatttggacgtgtgaccagtgcacatatgctaaccccagatctgccagaaactgccaggcttgtaacaaccagcatcgatagcattacatagctatggttttagatctcgactccattggttgagaaacctctggttcaaacctggtggtaaagaacatatgcaaagttgaagttttcaatgaacagtggagctggcgtgaggaggtattagcagagaactgttgcctatgcaaattagattttctcaactcatcatgtgctatggctaaaaaacctcaggtcattcccaatttttttaatcaactgacggtatccttgaagcctcgctcatcatcatctagttcatcctgtatataactctatatcgatatctgtaactcttgtgttgttctatggaagtagcgcgtactagcagatgtgcgccaccaatgaactgagttgttgtaatgatgttgtaaccttgtaataatgaattggccaattctcaaggaaatttattc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0492100, RefSeq:Os04g0492100