Os04g0493000

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Revision as of 11:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0493000| Description = Zinc finger, B-box domain containing protein| Version = NM_001059716.1 GI:115459161 GeneID:4336260| Length = 1211 bp...")
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Gene Name

Os04g0493000

Description

Zinc finger, B-box domain containing protein

Version

NM_001059716.1 GI:115459161 GeneID:4336260

Length

1211 bp

Definition

Oryza sativa Japonica Group Os04g0493000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25046570..25047780

Sequence Coding Region

25046761..25047000,25047096..25047443,25047573..25047758

Expression

GEO Profiles:Os04g0493000

Genome Context

<gbrowseImage1> name=NC_008397:25046570..25047780 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25046570..25047780 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgccagcaagcaccagcgcctcccgctcgacgccgcgctccccgccgccctcccgcgctgcgacgtctgccaggagaaggcggcgttcatcttctgcgtggaggacagggcgctcttctgccgggactgcgacgagcccatccacgtcccggggacgctctccggcaaccaccagcgctacctcaccaccggcatccgcgtcgggttcagctccgtctgtagcgccaacgccgaccacctcccgccgccagcgcccaaggggaactccaagccgccggcaagcggcatcgctgctgctgctgctcccaagccggccgtgtccgcggcggcgcaggaggtgccgtcgtcaccgttcttgccgccgtcgggctgggccgtcgaggatctcctgcagctctccgactacgagtccagcgacaagaagggctctcctattgggttcaaggatctggagtggctcgatgacatcgacctgttccatgtccagtcgccggccaagggaggcagcacggcggcggaggtgcctgagctcttcgcctcgccgcagccagcgagcaacatggggctctacaaggcgagcggtgcacgccaaagcaagaagccacgggtggagatacccgatgacgacgaggacttcttcatcgttcctgatcttggatga</cdnaseq>

Protein Sequence

<aaseq>MRIQCDACEAAAATVVCCADEAALCARCDVEIHAANKLASKHQR LPLDAALPAALPRCDVCQEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQRYLTTG IRVGFSSVCSANADHLPPPAPKGNSKPPASGIAAAAAPKPAVSAAAQEVPSSPFLPPS GWAVEDLLQLSDYESSDKKGSPIGFKDLEWLDDIDLFHVQSPAKGGSTAAEVPELFAS PQPASNMGLYKASGARQSKKPRVEIPDDDEDFFIVPDLG</aaseq>

Gene Sequence

<dnaseqindica>781..1020#338..685#23..208#gttttgaggggagtacatcggcatgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgccagcaagcaccagcgcctcccgctcgacgccgcgctccccgccgccctcccgcgctgcgacgtctgccaggtaacgtactcctacgcgcgcgtgtagtagcaatagcagagtagagaagctgcagcagcatgtggctgggagagtggagacgtgtcgctgaggcactggtcgtacgtgttgtcgtcgttgttgctgcaggagaaggcggcgttcatcttctgcgtggaggacagggcgctcttctgccgggactgcgacgagcccatccacgtcccggggacgctctccggcaaccaccagcgctacctcaccaccggcatccgcgtcgggttcagctccgtctgtagcgccaacgccgaccacctcccgccgccagcgcccaaggggaactccaagccgccggcaagcggcatcgctgctgctgctgctcccaagccggccgtgtccgcggcggcgcaggaggtgccgtcgtcaccgttcttgccgccgtcgggctgggccgtcgaggatctcctgcagctctccgactacgagtccagcgacaaggcaaggacctaactaacaaaaccattcttgataacaagattagcttagaaatcaagaattgccttacttgaccgtgtgtgtgcttgctgttgcagaagggctctcctattgggttcaaggatctggagtggctcgatgacatcgacctgttccatgtccagtcgccggccaagggaggcagcacggcggcggaggtgcctgagctcttcgcctcgccgcagccagcgagcaacatggggctctacaaggcgagcggtgcacgccaaagcaagaagccacgggtggagatacccgatgacgacgaggacttcttcatcgttcctgatcttggatgagatgttgttatgtaacagtaatgctatgcaagtgatgtaattttgtatgtatgcaaagaacactgccatctcggttgtactaagtgtgctaagtacatcttactgtgggcgtatgtaattgtaagacaatttgggcccaatacttatcagcatggtgttgggcatgaactatgatgtactatgacatgacg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0493000, RefSeq:Os04g0493000