Os04g0493400

From RiceWiki
Revision as of 11:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0493400| Description = Similar to Chitinase| Version = NM_001059719.1 GI:115459167 GeneID:4336263| Length = 1545 bp| Definition = Oryza sa...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0493400

Description

Similar to Chitinase

Version

NM_001059719.1 GI:115459167 GeneID:4336263

Length

1545 bp

Definition

Oryza sativa Japonica Group Os04g0493400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25086300..25087844

Sequence Coding Region

25086614..25087020,25087488..25087770

Expression

GEO Profiles:Os04g0493400

Genome Context

<gbrowseImage1> name=NC_008397:25086300..25087844 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25086300..25087844 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaactcaccgacgctgacaatgctggtgttcctagctattgggctatctctcgtcctctccgcagccggcgtgtctgtggagagcgtggtcaccgaggcgttcttcaacgggatcaagaaccaggccccgaacggctgcgccggtaagagcttctacacacggcaatcgttcctgaacgccgcccgctcctactcgggcttcgccaatgaccgcaccaacgacgactccaagcgcgagatcgctgccttcttcgcgcatgtcacacacgagactggacatatgtgctacatcaatgagataaatggggcaaacatggactattgtgacaagagcaacaaacagtggccgtgccagccgggcaagaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgggaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaatctctttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcaggggtttggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccggtgccgtcaacgcaagggtaaactactacaaggactactgccgccagttcggcgtcagcccggggggcaacctctactgttga</cdnaseq>

Protein Sequence

<aaseq>MANSPTLTMLVFLAIGLSLVLSAAGVSVESVVTEAFFNGIKNQA PNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGHMCYINEI NGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQD PTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQ FGVSPGGNLYC</aaseq>

Gene Sequence

<dnaseqindica>825..1231#75..357#atcgaccatcacctctcccacacggggcgtacgtgctaagctgcagcacaacccaaagccatatatctccgataatggcgaactcaccgacgctgacaatgctggtgttcctagctattgggctatctctcgtcctctccgcagccggcgtgtctgtggagagcgtggtcaccgaggcgttcttcaacgggatcaagaaccaggccccgaacggctgcgccggtaagagcttctacacacggcaatcgttcctgaacgccgcccgctcctactcgggcttcgccaatgaccgcaccaacgacgactccaagcgcgagatcgctgccttcttcgcgcatgtcacacacgagactggacgtaagcaaaatatactactcctacatgtatataccggaaagtattttcccgtcgaggagatgtactcttatttcttgcatgtcactagaaaaaaaaattaacaataaaaatttatactccacagtatatatatttaaattcaaatttggctttcatatgtcgatcgtaacaaaaataataaatataattgattaatgtcatatactagtttcagtttattttttccgcttacacaagttgaatttaaccttatatatttgtgaatatatttgtgaagtgatatatttcatactaatatatcttgtcaattttttttaaaaaaatagccatttaggtgatttaggtgataaacaagaaacaaggaatgttttctagatggacaaaagttaatctcctatatgtacatatagtagtatgcatgcgtgtaatttggtatgcaactaacgatgatgataattcactggcagatatgtgctacatcaatgagataaatggggcaaacatggactattgtgacaagagcaacaaacagtggccgtgccagccgggcaagaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgggaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaatctctttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcaggggtttggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccggtgccgtcaacgcaagggtaaactactacaaggactactgccgccagttcggcgtcagcccggggggcaacctctactgttgagttgcatgcacacgctgctcggctcatcgtgatcgactgaataatgaacagagtaataataatgaataaaacgtttggtgcgtacgtacattgcatacgtgcacggtacgtacatgctggaagctaagtgacgtcaaagagtttagtactaaaaagtgatctttctattcgatgttactctatcttagggcggagtaagtataaatgtgtaataagaaataaaatgttaggatcgcgggatcgaaagatgagtaaacatgtgtaccggtggaccacttaaataattatttctccaacccaagtactttcatgct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0493400, RefSeq:Os04g0493400