Os04g0495000

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Revision as of 11:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0495000| Description = Protein of unknown function DUF642 family protein| Version = NM_001059726.2 GI:297602973 GeneID:4336270| Length = 19...")
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Gene Name

Os04g0495000

Description

Protein of unknown function DUF642 family protein

Version

NM_001059726.2 GI:297602973 GeneID:4336270

Length

1924 bp

Definition

Oryza sativa Japonica Group Os04g0495000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25149686..25151609

Sequence Coding Region

25149686..25149786,25150500..25150966,25151062..25151609

Expression

GEO Profiles:Os04g0495000

Genome Context

<gbrowseImage1> name=NC_008397:25149686..25151609 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25149686..25151609 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtcttggcgaagtgcacgcgctgcctggctcttgtggtggtggtgctcgttggcgtggctgcaccggtggtcttctctgtcaccgatggtgagcactcgccttctaccaaacggcaacttcgagcacgggccggacaagtcccagctgaaccgaactgggagatctctgggttcgtggagtacatcgggtccgggcacaaggagcaggacatgatcctggcggtgccggagggcgcgtacgccgtgcgcctgggcaacgacgcaaccatccggcagcggatcagcgtcacccgtcacatgtactactctgtcacattcagcgccgcgcgcacctgcgcccaggccgagaagctgaacgtgtccgtcacgcttgagttcggcgtgctcccgatccagaccgtgtacaccagcaccggctgggactcctactcctgggccttcaaggccgaacacagcgccgtgtggctctccatccacaaccccggcgtcgaggaggacccggcctgcggcccactcatcgacctcgtcgccatcaagactcttcctcctccccatcacaccaggggtggtacaatgctgaggaacggggacttcgaggagggcccgtacatcttcgccgacacgccgtggggtgtcctggtgccgccgatggacgaggacgtgcactcgccgctgcccgggtggatggtcatgtcgaccacgaaggtcgtcaagtacgtggactcggcgcgccacgcggtgccgagcggcgcgcacgccgtggagatggtggccgggagggagtgcgcgctggtgcaggaggtggcgaccgtgcccgggcggcggtacacgctgtcgttctccgtcggggacgccggcaacgggtgcatcgggtcccttgccgtggacgcgtacgcggcgcgggcgacgctgaaggtgtcgtacgagtcgcggggcactggcgggcacgagcgcgccgagctcgtgttcgcggcggtcgccaaccggacgcgcgtggtgttccacagctccaaccaccatatgaagtcggacggcacgctgtgcggtcctgtggtcgatgacgtctccctcgtcagtgtggacaagcacacggttcgccggttgttgatgtag</cdnaseq>

Protein Sequence

<aaseq>MVLAKCTRCLALVVVVLVGVAAPVVFSVTDGEHSPSTKRQLRAR AGQVPAEPNWEISGFVEYIGSGHKEQDMILAVPEGAYAVRLGNDATIRQRISVTRHMY YSVTFSAARTCAQAEKLNVSVTLEFGVLPIQTVYTSTGWDSYSWAFKAEHSAVWLSIH NPGVEEDPACGPLIDLVAIKTLPPPHHTRGGTMLRNGDFEEGPYIFADTPWGVLVPPM DEDVHSPLPGWMVMSTTKVVKYVDSARHAVPSGAHAVEMVAGRECALVQEVATVPGRR YTLSFSVGDAGNGCIGSLAVDAYAARATLKVSYESRGTGGHERAELVFAAVANRTRVV FHSSNHHMKSDGTLCGPVVDDVSLVSVDKHTVRRLLM</aaseq>

Gene Sequence

<dnaseqindica>1..101#815..1281#1377..1924#atggtcttggcgaagtgcacgcgctgcctggctcttgtggtggtggtgctcgttggcgtggctgcaccggtggtcttctctgtcaccgatggtgagcactcgtgaacaaatactatcagcttgttaatcagttgccgaaccttctattgttttgtaccacgcgaaacctgccgttgacttatatccatagatcgatcctcacaactgcatatacatgcagcagttagttgtataatcattttttttttgaacgaaagttagttgtataatagatctgtttggtgtgtgaatgtctcttttgatccttcctgcatctacagtattatcacctgagttaaatatcagatagcaatttatgaatgaacttgataaggttgacaatgcatatatagatcaggtgcacaccagagaggattgaggattcaaagctcaaatcttctgctgatcatgacagtgaatttctagaaactaacagccaaagccaatctgcagcgatctgaaccactttcatttttagtcatagtaagtagttacacctggctcgttaattctctccgaactctgaactctgtacagcgtaatactgttcttcattagttcactacttcactgcttaagaaaccactgctttgccctttaatcgctgtaatgtcgaagctcagttctgtttcgagctacataatacagcaaagttgctttgcgttcggactttttctagttcaattttcagttccctataacagagaacccctttcctctgttttcaatatcatttctcactttgtgacagctcgatcatatattgtgcgtacaggccttctaccaaacggcaacttcgagcacgggccggacaagtcccagctgaaccgaactgggagatctctgggttcgtggagtacatcgggtccgggcacaaggagcaggacatgatcctggcggtgccggagggcgcgtacgccgtgcgcctgggcaacgacgcaaccatccggcagcggatcagcgtcacccgtcacatgtactactctgtcacattcagcgccgcgcgcacctgcgcccaggccgagaagctgaacgtgtccgtcacgcttgagttcggcgtgctcccgatccagaccgtgtacaccagcaccggctgggactcctactcctgggccttcaaggccgaacacagcgccgtgtggctctccatccacaaccccggcgtcgaggaggacccggcctgcggcccactcatcgacctcgtcgccatcaagactcttcctcctccccatcacaccaggggtacgtaagctaatccgttgctcaagagaattttcgacatgtcgcaagcaaaacacgttatgacgagttcagaatctattcaactgaactggcaggtggtacaatgctgaggaacggggacttcgaggagggcccgtacatcttcgccgacacgccgtggggtgtcctggtgccgccgatggacgaggacgtgcactcgccgctgcccgggtggatggtcatgtcgaccacgaaggtcgtcaagtacgtggactcggcgcgccacgcggtgccgagcggcgcgcacgccgtggagatggtggccgggagggagtgcgcgctggtgcaggaggtggcgaccgtgcccgggcggcggtacacgctgtcgttctccgtcggggacgccggcaacgggtgcatcgggtcccttgccgtggacgcgtacgcggcgcgggcgacgctgaaggtgtcgtacgagtcgcggggcactggcgggcacgagcgcgccgagctcgtgttcgcggcggtcgccaaccggacgcgcgtggtgttccacagctccaaccaccatatgaagtcggacggcacgctgtgcggtcctgtggtcgatgacgtctccctcgtcagtgtggacaagcacacggttcgccggttgttgatgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0495000, RefSeq:Os04g0495000