Os04g0500900

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Revision as of 11:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0500900| Description = Protein phosphatase 2C family protein| Version = NM_001187074.1 GI:297723278 GeneID:9269012| Length = 3014 bp| Defi...")
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Gene Name

Os04g0500900

Description

Protein phosphatase 2C family protein

Version

NM_001187074.1 GI:297723278 GeneID:9269012

Length

3014 bp

Definition

Oryza sativa Japonica Group Os04g0500900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25402154..25405167

Sequence Coding Region

25402154..25402279,25402382..25402451,25402850..25402865,25403122..25403239,25403324..25403446
,25403558..25403717,25403779..25403855,25403944..25403996,25404572..25404626
,25404973..25405167

Expression

GEO Profiles:Os04g0500900

Genome Context

<gbrowseImage1> name=NC_008397:25402154..25405167 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25402154..25405167 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcaacctcaacgtcccctccaagttcctgacataacaaagtctactcattctggagggaacactgtacttgcttatgcttcatcagctatgcaaggataccgtagcaccatggaagatgcccatgcgactattgaaaatcttgatgctctcactaacacgtcattctttggtgtttatgatggccatggaggttctgctgtagcaagaatggatgagatgttgagaaatcaggcggcaagcaaggaattaactgagtatggtagtggcaacgagtattggagaacagctgggcggtcttggctcagatgtgctccttgtgtgctgggacctgtctattgtggaccattagcagaaggatgtacagcatgtgtggttctcattagaaatacgcagatcgttgttggaaatgctggtgatgctcgttgtgtaatctcaaggaatggtcaggcaatcgctttatccaatgatcacaaaccaaattttccggaggaaactcagagaatagtagctgcaggaggttccgtatctttttctaggggttcccaccgtgttaataatggaattgcagtatcaagagcaatcggtatagcttatatgtttgttggcggggatttatcttacaagaacaacaaaaagttgcgtcctgaacaacaattgctgacttgttctcctgaaattcgagctgaccaattaactgatgataccgagtttcttgttatagcatgtgatggagtctgggatgtcttggcaaaccaggctgtggttgattttgtacgccttcacttaaacaatggggtggagctgtcggtaatctgcgagagccttcttcaggaggccattacacgagacccaccatcgacggacaacatgagcgtcatactggttcggttcctgcacccagagggcaacaggggggcgagggcggctacttccagcaccagtaccggcaccgtccccagccgccacagcaaaagcatatcgctttga</cdnaseq>

Protein Sequence

<aaseq>MAQPQRPLQVPDITKSTHSGGNTVLAYASSAMQGYRSTMEDAHA TIENLDALTNTSFFGVYDGHGGSAVARMDEMLRNQAASKELTEYGSGNEYWRTAGRSW LRCAPCVLGPVYCGPLAEGCTACVVLIRNTQIVVGNAGDARCVISRNGQAIALSNDHK PNFPEETQRIVAAGGSVSFSRGSHRVNNGIAVSRAIGIAYMFVGGDLSYKNNKKLRPE QQLLTCSPEIRADQLTDDTEFLVIACDGVWDVLANQAVVDFVRLHLNNGVELSVICES LLQEAITRDPPSTDNMSVILVRFLHPEGNRGARAATSSTSTGTVPSRHSKSISL</aaseq>

Gene Sequence

<dnaseqindica>1..126#229..298#697..712#969..1086#1171..1293#1405..1564#1626..1702#1791..1843#2419..2473#2820..3014#atggctcaacctcaacgtcccctccaagttcctgacataacaaagtctactcattctggagggaacactgtacttgcttatgcttcatcagctatgcaaggataccgtagcaccatggaagatgccgtgagtaaccttccagtcttttgtaggagaaatggggggttggcttgcaactaattttggtgaaattctaaaggctaatttgtgtactcttctattctccagcatgcgactattgaaaatcttgatgctctcactaacacgtcattctttggtgtttatgatggccatggaggtttgatcttcaatctcatccccatataaacagcaaaattcaaatttattgtactgattgaggggatactcccttctcattgtatagggcatattttctttaggcatgctcattcttctttaaagctacactttcaactttgatgtctcacataatatattgttcatagctacaaaaccaatatgacgagaaagcactttgactaattgttggtcaaaacctacaaagtttgacttcttgaaaagtatgctcaccctacatagtacataatgtggggggaggactaggctagtaaaatttataatatccatgtacatgcaaccttcattgcactcaagagtaatgttgcgcaatggttatgtaagatgagtatctcaattatttaacttctatttcaggttctgctgtagcaaggtattgcgcaaatcacttgcacaataaggttttggagcaagaagattttagcagtaaccttgctaatgcattgaggcaatcctttttcaggttgtttttacagctagttaatccattaactctatattttgatgccacatgagttctttttataagaatgtaagaaacaaccatcgccacattggtgttcattattgcacctgttgtgcatccaaatataaaatatgtaatcctttttcctccttaattgttgcagaatggatgagatgttgagaaatcaggcggcaagcaaggaattaactgagtatggtagtggcaacgagtattggagaacagctgggcggtcttggctcagatgtgctccttgtgtgctggtaatatctcaattgttctgtagatcgagaatctaaggtttttatatttttgttatttacttcaagttggtttttgttttccagggacctgtctattgtggaccattagcagaaggatgtacagcatgtgtggttctcattagaaatacgcagatcgttgttggaaatgctggtgatgctcgttgtgtaatctcaaggaatggtcaggtgcagtgactacttttgttttcaaatgcctagctggtatttcctttttcataatggatgatgcactctaatgtcacctaactattctgtttatttctgttgtattcgaaggcaatcgctttatccaatgatcacaaaccaaattttccggaggaaactcagagaatagtagctgcaggaggttccgtatctttttctaggggttcccaccgtgttaataatggaattgcagtatcaagagcaatcggtatagcttatatgtttgttggcggtgtgaggtcatacacaaacaatttaatgtgttgtaactggtattcttcttctttatacaggggatttatcttacaagaacaacaaaaagttgcgtcctgaacaacaattgctgacttgttctcctgaaattcgagctgtaaggataactacgttgtgttattgaagttaagtttgtcccactggatatgagctgatgcaaaatgatccccttttgtctctggcaggaccaattaactgatgataccgagtttcttgttatagcatgtgatggagtctggtaagtcctcagctaaaagtatcagaaacagttcttatatttttctcccatgttcatgatttcttgcagaatataggaactccaaatgacaattctctctcgtacgcttatttgtttgttcaaaatatttaccgacaaaatttgcagattttgttcagctcagtttgatttactgactaggctactttaccaccatgtacataaagtcattttgtacagttgttgaaccggtgggtctaattcctttcgttagtttagtgtgatgatagcattggagaggtcaaatgtctgcacctccctatatatgggttcggatgctttattgtgtccagatgactattaacttggtggcatgaatttcagtttcacctgttcagttcgatggaaatgaccatcgaatatatctaatttatatcataaggactaaacttgaagttcctggatgaggaaattatttatgaaacctgatggagtggtgataggaatttcaccctgcctgaccattactctttgacacaattaatgtaacttgcagctgtttgctctatatttacatattttttttggttttgtagggatgtcttggcaaaccaggctgtggttgattttgtacgccttcacttaaacaatgtgagtgacattccccgccccctctccagtgatacactgtaacagtaaccttgctaccagatgaggaaaatttatccgtgtgcagattatgcctgtagaaatgtcttcatactgagaattataattttgtccagcatatcttgccctgaatgtagctctgacatttagcacagactatcctctaaatgggatggtgcctggcctagttaaataattttctgtcggattgccgtttgtatagtctaaaaatggaagcgtgtgcaccatgttttgcaccttgtccatttacagttatatgttgttattccttttgccttgacatatatgtatgatgtgaccaacacagggggtggagctgtcggtaatctgcgagagccttcttcaggaggccattacacgagacccaccatcgacggacaacatgagcgtcatactggttcggttcctgcacccagagggcaacaggggggcgagggcggctacttccagcaccagtaccggcaccgtccccagccgccacagcaaaagcatatcgctttga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0500900, RefSeq:Os04g0500900