Os04g0502100

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Revision as of 11:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0502100| Description = Conserved hypothetical protein| Version = NM_001059768.1 GI:115459265 GeneID:4336315| Length = 4613 bp| Definition ...")
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Gene Name

Os04g0502100

Description

Conserved hypothetical protein

Version

NM_001059768.1 GI:115459265 GeneID:4336315

Length

4613 bp

Definition

Oryza sativa Japonica Group Os04g0502100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25461064..25465676

Sequence Coding Region

25462909..25463314,25463793..25464142,25464907..25464993,25465169..25465333

Expression

GEO Profiles:Os04g0502100

Genome Context

<gbrowseImage1> name=NC_008397:25461064..25465676 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25461064..25465676 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcaggggagctcttcgtcgatgtcctcgtgctcttcttccacgacggcgtctaccgggcccgatcaaagaagattgtcggcggcggcaccgacgttcgacccgtctatggcctcgagttcgtccatggcggctacgacggcgggcgttccagggagctcgccggcaatggcgcctctgcttacctctgcgaggatgtcctcgggctcttccgcaagttccactacttcgttcgacccagcaggatcgtcggcgttggcacctgcgcgctccccgaggcctggattgtcggcgtcggcacctgcgttctacccgacgacggcctcgagctcttccacgccggttatgccggccgttccagggttcttgccgcagattcctgagcccaccgcttcttgttccgactttcctccggagatgctctggcatcatccttgtggagaacagaagatcaaaggaggacggccggaccttcttggtcgtgagtttggtattcttgctgaacagaagaggttgattcagagacatttagatctgaaagaagaaatgcatttgcgccataacaaggagatcgagaatgccttcatttcggagacaaggctggcccggggtgtggagcaagatctgcttggggactgcaagaaggccgtgctagtgcagcaagatcaatctggaaaagaagaagaaagtcatcagtgcctgaggcagctgcaagacgtcaacggcgagcagcttgtgggggtgccgaagctgggtcttcctggagctgaagaaaacgttgcatgcaacaacactgcttcccataaagaattcagtgaatttccaggtccagatattaagtttgggagcatcaacatcagagatataccattgctgcagggaaggcaagctgcagttattctgcccaatcctcagctagatagaagaacttccggtttaactccagctggagccagttccctggatcaggagacagatcaggagctgaatgaaaagcttttgtag</cdnaseq>

Protein Sequence

<aaseq>MDQGSSSSMSSCSSSTTASTGPDQRRLSAAAPTFDPSMASSSSM AATTAGVPGSSPAMAPLLTSARMSSGSSASSTTSFDPAGSSALAPARSPRPGLSASAP AFYPTTASSSSTPVMPAVPGFLPQIPEPTASCSDFPPEMLWHHPCGEQKIKGGRPDLL GREFGILAEQKRLIQRHLDLKEEMHLRHNKEIENAFISETRLARGVEQDLLGDCKKAV LVQQDQSGKEEESHQCLRQLQDVNGEQLVGVPKLGLPGAEENVACNNTASHKEFSEFP GPDIKFGSINIRDIPLLQGRQAAVILPNPQLDRRTSGLTPAGASSLDQETDQELNEKL L</aaseq>

Gene Sequence

<dnaseqindica>1846..2251#2730..3079#3844..3930#4106..4270#agagagagccatagccagcccgccgctccccgccgctgcctcttcgctcgtctccgtcgagtccgtcacgcaggtaaaatcccccgccgctgactcgcgcgctgatctcgtgtgtgttttggtcccgatttgggccgagtttgatcggcatgccgcctgggtggtgttgattcgggtggccttccgcaggggatagttggggggatcgatccactggttctcgaactgccatagtacttgctttagaggtagcggtttcacttgtgtgatcgaccaatcagccatttctgctcgattaaattcggccagacctgtgtaaattggggtttacgcgaaccgaggaggtgttgtagctgtgagtattcatgccacatgcccacattgatcaaattatgctcttcaaacacatgaatctactaaatttagaagaaagaaaaaaaaacagaggggctggcaatttcatagtggattcatttatttttgtcatctcatttttctaagttcttaaggaaatgttgtgcaaattaagcagaaactgtaataccccaatgtggtttcgtattagcacctgtttgtgtgacaggagattctcagattttagatttgaggaccatcaatccctcactacttcactagcatctacttgtcatgggataaatctgaagtcccaagacctgtataaacgaaatttctccaattctcatgcagatcgtagtaaactttggtctctttgtttcatccagatcgggagaggtttgacagtgcaatgtaatcgataagcaaaaccgacagatacaccaaatggcacgcctgtgcagcttcttgtttgcaatgatgtgatctggcagaaagaaggcttgttggttgagactgcagtagccttgggcagatacacttgatgatttattgatgcagaaattagtgcttagcaacataatgttgtctgtgtactttattaagctaaatggacaataaatatgctgatacaatcagcatgccattcctcgaaacgaagtactaaagagaataaatatcgaagaggtttttcagcaaatagctatgtcttcctcgatgagaagaggtaggagcattatctttcatagttgtttgaatcgagttattctgaatccctgaatgttgatgaagcttctatgcctaatctgcagcaaacccaggagttagagcagtcaggaagccctggagagaaagcagtccaaggctccaagctattagttttttcaagaagagaaacctgtgaccttttggtgcaatgtcctctttgggagatgttctgcacaacatcttgtgaattgtgatgctagatttcatttcctgttgcttgctttgcttccagctgactgtatatacatataggtgctggtatttctggctctgtgtgcagcagattgcttgtcatgtgctttttttttttcagaatgctctactgattacatatttacatcttcccagaaatcttgtttatcaaagtcagatttttgcacattttttttggagagatcctttgcacattttactcgtctactcatctgacttataattatttttttatcatttcagcttggtttcatgactctcatctagcacaagctcccggtctgactcaagccgagtgggctgggcctgggccgcatcacgcaggcacacgagctgggatgggatcatttggactcttccagttcgcgccttatataatgacctcacgcacgttggctcgtcaatcatcatcggagcagacacgagagcggcgatctcatctcaggcgcaacgctctgcaagtctcggagcgctgccggagctggtcgctgcacggcgagctattcggcgatggatcaggggagctcttcgtcgatgtcctcgtgctcttcttccacgacggcgtctaccgggcccgatcaaagaagattgtcggcggcggcaccgacgttcgacccgtctatggcctcgagttcgtccatggcggctacgacggcgggcgttccagggagctcgccggcaatggcgcctctgcttacctctgcgaggatgtcctcgggctcttccgcaagttccactacttcgttcgacccagcaggatcgtcggcgttggcacctgcgcgctccccgaggcctggattgtcggcgtcggcacctgcgttctacccgacgacggcctcgagctcttccacgccggttatgccggccgttccagggttcttgccgcagattcctgagcccaccgcttcttgttccggtaagcttcgaaaggagttctttgtgtatctttttgttgtttcgaattgtgattttcttcctggttcttgtggatcgatgaatcctttttgcttcgattcccaagtgcttatcttggctctcccgaatcttttgatctttgggttctgcggaatctttcatggttcttgttttcttgttttttttttggctcatcttggctttcctgcataatcaccttcttgttttcttggttctgggttttaactcttcgtgtttatttggaatccttttcttgaaggagacaaaacgtgatatttttttataaaaatgatattagcgatttcactgatgaatctttgagaattttcttggtcctgtatgaaaaaaaatgccatcttttgtttgatgttcggtagtctttcacattttccttgccttagatagtttgctgtcattttatctcgggcagcgattaattatcgtgatatcttgatcagactttcctccggagatgctctggcatcatccttgtggagaacagaagatcaaaggaggacggccggaccttcttggtcgtgagtttggtattcttgctgaacagaagaggttgattcagagacatttagatctgaaagaagaaatgcatttgcgccataacaaggagatcgagaatgccttcatttcggagacaaggctggcccggggtgtggagcaagatctgcttggggactgcaagaaggccgtgctagtgcagcaagatcaatctggaaaagaagaagaaagtcatcagtgcctgaggcagctgcaagacgtcaacggcgagcagcttgtgggggtgccgaagctggtaagtctggaatcaattgaactaccggtaatgttgaataggagggttattagcatgaattgttgaatttaggaaaaaaaacaacaactgcatctggagatattttaaaacataagtacacattacatgcttgagaaatatgcagatttgcaagtgagtcccctacagaaaagctactgttacactatcggtaatgttgaataggagggctattagcatgaattgttgaatttagtaaaatgacaccagcatttggatatactccctccgtttcatatttataagtcattttgactttttttcctaatttttttcgagaatgcgcaaaagatttgcgcatctttgtattatgattagggaattaagtcaacaacttacaaaccaacctgaacagaaaaaagaaacaaagagaaactttattaagtttgaccaagtttatagaagaatttagcaacatttaaaacaccaaattagtttcatcaaatctcattgtatatattatgataatatgtttgttttgtgttgaaaatgataatatgttttgctataaactttgtcaaacttaaaaaagtttaactaaaaaaaatcaaaatgacttgtaatatgaaatgaagggagtgttttaaaacaaggaagaagtacacacttgagaaatgtgcagatttgcaaaattgcaagtgagtctcctataggaaagctactgttaggaagtatagttgggttggcacttacagcttaagacatgctttgctgttatttgtcagggtcttcctggagctgaagaaaacgttgcatgcaacaacactgcttcccataaagaattcagtgaatttccaggtccagatattaaggtatatccatgtcacagaagtgtcaatgtcagatactgcaattcatggcagcttggaaatagtttaccgacattcatgcctcatgctgcttagaccatcttataaaatgctgcaatagtattcaggtcatcttgcaaggatgataaccatatttacgatacgcttctgactgcagtttgggagcatcaacatcagagatataccattgctgcagggaaggcaagctgcagttattctgcccaatcctcagctagatagaagaacttccggtttaactccagctggagccagttccctggatcaggagacagatcaggagctgaatgaaaagcttttgtagtagttatgaaatagttactcagatcgtgctcctgtggacttgtgcagttgtgttgtgctgtacttacaaatctgtcttaaattgggcatttgtcatgctgaaaagaatccgctgaagatagtggtaaactggtacacaaaattctgtcttgaaacacccattaggccattaggcccattagtcagcaagaacatgttgaaggcagtgtcaccctgctgtgcattatataactcagaatagcaagtattctttggctgtttgtactgaacaatagctctggtagctacattctgtaaatttttttgccttctggaaatgaaaatcagcaagaacatatactgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0502100, RefSeq:Os04g0502100