Os04g0506900

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Revision as of 11:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0506900| Description = Conserved hypothetical protein| Version = NM_001059795.1 GI:115459319 GeneID:4336344| Length = 6168 bp| Definition ...")
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Gene Name

Os04g0506900

Description

Conserved hypothetical protein

Version

NM_001059795.1 GI:115459319 GeneID:4336344

Length

6168 bp

Definition

Oryza sativa Japonica Group Os04g0506900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25712813..25718980

Sequence Coding Region

25713262..25713971,25714057..25714243,25714439..25716187

Expression

GEO Profiles:Os04g0506900

Genome Context

<gbrowseImage1> name=NC_008397:25712813..25718980 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25712813..25718980 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacagattagtagcaatggagatgtccaaaggagtggaatcaaagaggaagccacctagtgtcgttgccagactaatggggcttgatgatgatctacctgctaaagaaccagcattacaatcttctagaagaaatttgcggagaagtcattcacttgataatttggcagcaacaaacaggccccaacaacagcaagagcagcattacagcaggacaacaccaaacatacacataggccccaaagagacagttgaatttaaggatgtgtacgaagtctctgaagatccattaaagagacatcatattctggggcaaaattttccttgggaaagatcttctgggaacaagagtgacactaggatcgaagctgttcgacagaagttcatggaagcaaaacgccttgccacaaatgagaatctcatccattcaaagcagtttcaagaagctcttgaggttctaagttcaaacagggagttgtttctgaagtttcttgaagaaccaagccctgctttcttgaagcagctcgatggacttgacacaacgcctgcaccgcctccgacgaagcgtattacagtgttgaagccaatcaaatctgttgagaacaatggaataagagaaaccagaacacaccaagttattaatgaagaaaatgaacttgtgatgggaaagactcaccagagatcttactcagcagatgacaacttctccaagtcaactaggatagtggtcctaaagcctagccctgggaagcctaatagaacaggagccaggctaactgcccgagcagctccatctgaacaaactcggcggatcgacttccatggaggtttacaagatgatgcatccatcctaggatctagggaattactgcatggttcggttcagcacatgccagagagtcgtcatcggcgggacgaatccctgatatcatccacatattcaaatgggtatggtggagatgaaagctctttcagtgggtcagaagttgactacattgatgaaggaggtagcccaagtgactcagatgcagtcagtccaatgtcgcgacattcatgggattacatcagaagacacaacagtcctcactcagcctctacttttagcagggcccattcacattcacctgagtcatctgtgatcagggaagccaaaaaacggctttcagagagatgggcaatggtatcatacaatgagatcaatcaagaacaagtacctttgcgaaggagctcaaccaccttgggtgagatgctctcccttcaagtagctaagaaagaagaagctgttgctgggataatttctgtttcaagcaaccggtcaagtggcacagaaaatgagttggccatgaaagatgcatgcaaatctactttaagagagtacgatgaaaatgggaagagctctccaaggaatttagcaaaatcaaaatctgtcccagtgtcttcatctatatttgacaacgtagcagtgaatgctcaatctgcaaattctgaagggactccgaaggtgtttacaaagtcaggtagagcaaaattatctttcacggggaaaatatcaagttttttcttcccaggcaataaaaggccaacaaaagagaaaacttccctctcatctgatagctcaggcgagatatttggatgtatcgggcacatggtgccgcagtctgatcacaatcttggtcctgatgaacaaatggctttttgcaaggatgaagctgataattccaccaatcatgctccctgttctacaaaagatgctggttccatagaagtacctgtatcttctgactgtgtaagtggagatgttgatgaagtaaaatcaaatggtgatctaaaatctatccacgatgagactagtcctacttcaattcttgacacggtttttgaagatagcaacagtaatgaacctgaatcttcaagaagaacttcctgcaccgagagggttgccttacgatgccctgctatcgattctgttgcccgctcattttcatgggaagataccaactcaggttctccgttgctaggtggcctaaagcattccaatgtagatgatgccgattatgatgatgatgaactaaaatgttactctcttgtacaagagatagtatcatctgctggattatgccatctgcagttaagtatggtcttcacagggtggtacctgcctgaatccccccttgatcctgcattgtgtgacaagttcttggatcgcaaggaggaggatgctaaatcgagggagcgaaggtcacaccaaaagctcattttcgattgtgtaaatatggccttggttgagattggccaggatacgttactatgcagctatccatggagtagagcatgcttaagaacatggagggagaaactatctgaaaccttgggtgaagaagtatggaacatcgtgagcgattggctttatggagatgggagctttgcggcaaacaaggacgacaatgctggaataatcttggaaagaattatgcaggaggaggtggaagggaagggttggattaagctattgacaatggaaacagatgagatcactgagcagattgccagtgaagtgttggaggacattgtcacagattctgtggagcatctgtcaatttgttgttcagagcatggcatttcaatgccagtagcaaatctgtag</cdnaseq>

Protein Sequence

<aaseq>MNRLVAMEMSKGVESKRKPPSVVARLMGLDDDLPAKEPALQSSR RNLRRSHSLDNLAATNRPQQQQEQHYSRTTPNIHIGPKETVEFKDVYEVSEDPLKRHH ILGQNFPWERSSGNKSDTRIEAVRQKFMEAKRLATNENLIHSKQFQEALEVLSSNREL FLKFLEEPSPAFLKQLDGLDTTPAPPPTKRITVLKPIKSVENNGIRETRTHQVINEEN ELVMGKTHQRSYSADDNFSKSTRIVVLKPSPGKPNRTGARLTARAAPSEQTRRIDFHG GLQDDASILGSRELLHGSVQHMPESRHRRDESLISSTYSNGYGGDESSFSGSEVDYID EGGSPSDSDAVSPMSRHSWDYIRRHNSPHSASTFSRAHSHSPESSVIREAKKRLSERW AMVSYNEINQEQVPLRRSSTTLGEMLSLQVAKKEEAVAGIISVSSNRSSGTENELAMK DACKSTLREYDENGKSSPRNLAKSKSVPVSSSIFDNVAVNAQSANSEGTPKVFTKSGR AKLSFTGKISSFFFPGNKRPTKEKTSLSSDSSGEIFGCIGHMVPQSDHNLGPDEQMAF CKDEADNSTNHAPCSTKDAGSIEVPVSSDCVSGDVDEVKSNGDLKSIHDETSPTSILD TVFEDSNSNEPESSRRTSCTERVALRCPAIDSVARSFSWEDTNSGSPLLGGLKHSNVD DADYDDDELKCYSLVQEIVSSAGLCHLQLSMVFTGWYLPESPLDPALCDKFLDRKEED AKSRERRSHQKLIFDCVNMALVEIGQDTLLCSYPWSRACLRTWREKLSETLGEEVWNI VSDWLYGDGSFAANKDDNAGIILERIMQEEVEGKGWIKLLTMETDEITEQIASEVLED IVTDSVEHLSICCSEHGISMPVANL</aaseq>

Gene Sequence

<dnaseqindica>5010..5719#4738..4924#2794..4542#ggggttaaatcatcccaccaacaccaaccaaaccaaccaaccaacctccccacaccgccgccgtcgcgtagcgcccgcccacccccgcgctcgccgccggcgggcgaacgctcgccatccgcccgcatcgccataggtgcgcgcctcccgattcccatccttttttctctctcccaccattcccggaattaatgcacggatgatggatgagttgcgtgcctcctatccgatgtttttcgtttttcttgccttctccgttagatcttcctcttttcatttcttctcgtttcagctccgctccgcaaaaccctgatgatggttgtcctcgaccacccattgcgtgcggcatttgatccgggcgattttttctttccttttttttttctttaggcgaggtggtgtgtgttcgtggaaatcccggtggccgtgcgggaggggcgcgcgtgaagatctgagctcgggtttatgtgatatccctcggaccgaaattcccatcgatgatggcgtaaaggcggcgccttttctctgcagttcctcccctcccgtccctttccgctcccgcgcccgagaatttattgctcgcaatgctgccctctctgatgatgagcagagcaaaggatgcagagcctttacactttaaatgcttggtcggtttggctgcaagatgccatattgccatctcatgcgtaccaccgccatccgtccgtcactgagctcctgcttgcgtagtgacgagcgttctggtttcgctcagctcgtctcgatttcacacggattggaattcggccgcattccgcgtggaaagcttcgagttcttggtgcttcttgttctccgctgcgaaaaccgcagctttagtaagagctcatcagatttcctcttttattttttttattttttctgtcttttgctttcggtttcagggatcgtttggggttcagggcgtacgttacgtctcgttcttctcattcctttctacgttgtcgttatacttctcctcctctccccctgctaatctgccatcaggaatacctggcgtcctcttcttttcattctaccgatgttctgatgaaaactgcaagattccctttgaggtccagcccgtacgatctcgttgctctggatagttttctattatatgtttcttattttgttcttttgaattctgaattcttgaaactagatgagcttgaagttaacagctcgaattttgatttccatggagtagaaagccgtgcttctttggccttctctctcctgccagctgtggagctgtgcacttgttttgttcatgatagctgaactatctgactgaggaaagtgcagcctttaaaagcctttgttactgcaaagattccttttgatggtaatcatggatttgtaatcctctccatccaattggaatagtgcatctgcttttatgtttacctcctgttggctgctactataccacattctactttttcatcttgcctggtgttgctcagtccccatcgtatcttttcgtcggacgtgccattctccttttcttttggttttaaatagaacagggccatgaactgtactctccttgcatcaaattgggcctactaatgcctgcaaaaatccagcctttgcatgtgtgtgttgatgttttcctggaaggacagcatcttgctacagtgtacagtaaattagtaagctcgtctgaccttatatggcccatacccacagtttcaaatttaagggttcaatactgagggctttgcaagagagcattatatgctttgctgcactaggttgttcgctcgccagtttcttaccagctacctgtaattctattgtgatttaattggctacatcagcttttggatcacgggtacaaggttggttttgtaatgttccatactcgctgttccatttgaatgaatttcttgtcataactgtcttttcaggattcatcaatgttgttatcctctgaggcttcctttgtaataagaaggcagtgatcaatttgtttgacctgagtaccgggatgaccagcaaaaatgtgctaactgatagaactcacagagatggtacaaaaatttcttccactttttctttgaagtgctgcttaagcaagtgatctgcaactcctgattttgctttttttcgccgggtcggcaactcctgattttgctttcataatgcatatgaatttatactttagagttacttgtgatagacgggctagatggcattggcattgtttgaataatgattcatttgcataatgttagatggtggtctccctttagacaatgtcatgtttgattgtttgtagatgatgacacatttgtcttttctttctggatgttttcctcttcttggattcgaaaataattcaaaagagctcttgctatttttgttgcaagacactgaccttaaaaatcaaactgactgtgttctttatttgttagtttgtattgatagacataagtgttttctgcctaatgttaattgttcagcttgcatctttcaggctctcgagttcataaaagccggcaagatgtcaatagaactgttgatcccaaaataggttgtgtagaggacaaattagtgagtatcatgtcatttgccctattctagcatatgtaatttcaatttatcgtaggtgtcagattgtccttctaaatatatatctggacagcacttacacaattttgtaaatttcagaaagtatgtcttcatttttttttctaatatagtattcattgcagcaggtagtagctagtactaggaattcttcaagcaacaaatcaaccatatctccaatgaacagattagtagcaatggagatgtccaaaggagtggaatcaaagaggaagccacctagtgtcgttgccagactaatggggcttgatgatgatctacctgctaaagaaccagcattacaatcttctagaagaaatttgcggagaagtcattcacttgataatttggcagcaacaaacaggccccaacaacagcaagagcagcattacagcaggacaacaccaaacatacacataggccccaaagagacagttgaatttaaggatgtgtacgaagtctctgaagatccattaaagagacatcatattctggggcaaaattttccttgggaaagatcttctgggaacaagagtgacactaggatcgaagctgttcgacagaagttcatggaagcaaaacgccttgccacaaatgagaatctcatccattcaaagcagtttcaagaagctcttgaggttctaagttcaaacagggagttgtttctgaagtttcttgaagaaccaagccctgctttcttgaagcagctcgatggacttgacacaacgcctgcaccgcctccgacgaagcgtattacagtgttgaagccaatcaaatctgttgagaacaatggaataagagaaaccagaacacaccaagttattaatgaagaaaatgaacttgtgatgggaaagactcaccagagatcttactcagcagatgacaacttctccaagtcaactaggatagtggtcctaaagcctagccctgggaagcctaatagaacaggagccaggctaactgcccgagcagctccatctgaacaaactcggcggatcgacttccatggaggtttacaagatgatgcatccatcctaggatctagggaattactgcatggttcggttcagcacatgccagagagtcgtcatcggcgggacgaatccctgatatcatccacatattcaaatgggtatggtggagatgaaagctctttcagtgggtcagaagttgactacattgatgaaggaggtagcccaagtgactcagatgcagtcagtccaatgtcgcgacattcatgggattacatcagaagacacaacagtcctcactcagcctctacttttagcagggcccattcacattcacctgagtcatctgtgatcagggaagccaaaaaacggctttcagagagatgggcaatggtatcatacaatgagatcaatcaagaacaagtacctttgcgaaggagctcaaccaccttgggtgagatgctctcccttcaagtagctaagaaagaagaagctgttgctgggataatttctgtttcaagcaaccggtcaagtggcacagaaaatgagttggccatgaaagatgcatgcaaatctactttaagagagtacgatgaaaatgggaagagctctccaaggaatttagcaaaatcaaaatctgtcccagtgtcttcatctatatttgacaacgtagcagtgaatgctcaatctgcaaattctgaagggactccgaaggtgtttacaaagtcaggtagagcaaaattatctttcacggggaaaatatcaagttttttcttcccaggcaataaaaggccaacaaaagagaaaacttccctctcatctgatagctcaggcgagatatttggatgtatcgggcacatggtgccgcagtctgatcacaatcttggtcctgatgaacaaatggctttttgcaaggatgaagctgataattccaccaatcatgctccctgttctacaaaagtacgcacttatctcaaattatattcatgccttactagttttttttaattatcaatgcattggtctaccggattctccttttccaccatggccttgtgaagctctttgattatctcttcccgagttcctacaaaagaatactgctttgtactccagttttcttactctcagtaactaataagagacatgtagcaggatgctggttccatagaagtacctgtatcttctgactgtgtaagtggagatgttgatgaagtaaaatcaaatggtgatctaaaatctatccacgatgagactagtcctacttcaattcttgacacggtttttgaagatagcaacagtaatgaacctgaatcttcaagaagaacttcctgcaccgagagtaagttttgtcacctgttctgacccttgagcttaccattgctgtcttctattatgtactaactacatgttctctatgtctttaggggttgccttacgatgccctgctatcgattctgttgcccgctcattttcatgggaagataccaactcaggttctccgttgctaggtggcctaaagcattccaatgtagatgatgccgattatgatgatgatgaactaaaatgttactctcttgtacaagagatagtatcatctgctggattatgccatctgcagttaagtatggtcttcacagggtggtacctgcctgaatccccccttgatcctgcattgtgtgacaagttcttggatcgcaaggaggaggatgctaaatcgagggagcgaaggtcacaccaaaagctcattttcgattgtgtaaatatggccttggttgagattggccaggatacgttactatgcagctatccatggagtagagcatgcttaagaacatggagggagaaactatctgaaaccttgggtgaagaagtatggaacatcgtgagcgattggctttatggagatgggagctttgcggcaaacaaggacgacaatgctggaataatcttggaaagaattatgcaggaggaggtggaagggaagggttggattaagctattgacaatggaaacagatgagatcactgagcagattgccagtgaagtgttggaggacattgtcacagattctgtggagcatctgtcaatttgttgttcagagcatggcatttcaatgccagtagcaaatctgtaggaagcaatttctttcatatgagcacttgccttgaattttgttgtgctgaaagaattcctcagcagcttcatagattgtatataagtccatgtagttgcttactcttgcttctgcttatacctacagctcagattggccaaaatcgtgcagttctttactctgtagatgtcctactggtcaaattgggttagtcagaagtctaacaatagcatatggtgtcagtagtattgtagctttttgggaagcgaaatactaacttttagtggccgtgtgtgtttgactttgaggtgcagcagaacactgctccatatgaccatatgctgcaaagagtattatataatgcattccggcgccagttggcagcatcctggtgtcttgagctctatgtcaaattcgtcaatctgaacgtctgaatataaaattgaaacgagggcatcttaatgtcccaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0506900, RefSeq:Os04g0506900