Os04g0510900

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Revision as of 11:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0510900| Description = Similar to Embryo-specific protein 1 (ATS1)| Version = NM_001187083.1 GI:297723296 GeneID:9267086| Length = 1687 bp|...")
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Gene Name

Os04g0510900

Description

Similar to Embryo-specific protein 1 (ATS1)

Version

NM_001187083.1 GI:297723296 GeneID:9267086

Length

1687 bp

Definition

Oryza sativa Japonica Group Os04g0510900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25953310..25954996

Sequence Coding Region

25953526..25953676,25953788..25953913,25953994..25954088,25954169..25954254,25954360..25954515
,25954630..25954735,25954783..25954995

Expression

GEO Profiles:Os04g0510900

Genome Context

<gbrowseImage1> name=NC_008397:25953310..25954996 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25953310..25954996 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccgccgctacacgttgcaactgcgactagtcgatctcatcgatctctcaaaagactacgagctcttcacagggaatcgagtgtgtttcggtcgtttgggccgcgccaagcggaagcggagggatgcaggggacaacgacgaccaaggccgggcgcaacggcgaccgcgccggcaccgaagccccgggcgcgacgagggcgactgacgggagggtcgggcgtggaggccaaggactcgctgaccatcgtcgcgctgcagtcgccggtcaccgtcgagcgccccgtccgcggcgacctcgaggaacacgtccccaagccatatcttgcgagagcgctggcggcgccggacatctaccacccagacggaaccacgacggacgatcacgagcaccaccacctcagcgtgctgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatctacccatgggaaacctacgaagggtgccgtgcgcttgggttcaacatgatcatgtccttcctcattgctctggtcgtgaacgtgtccatgagctaccccacgctgcctggctggctgccgtccccgttcttcccgatctacatccacaacatccacaggagtaagcacgggagtgactctgggacctacgataacgagggccggttcatgccggtgaacttcgagaacatcttcagcaagtacgcgcgcacgtcccctgacaggctcacctacagggaggtgtggcagatgaccgaggggaaccgcgaagtgctcgatctcttcggatggttcgcggcgaagctggagtggacgatcctgtacgtgctggcgagggacgaggaagggtacctggcgagggaggccatccggcgcatgtacgacgggagcctgttcgagtacgtggcgatgcagcgggagcagcacgctaagatgtcctag</cdnaseq>

Protein Sequence

<aaseq>PPLHVATATSRSHRSLKRLRALHRESSVFRSFGPRQAEAEGCRG QRRPRPGATATAPAPKPRARRGRLTGGSGVEAKDSLTIVALQSPVTVERPVRGDLEEH VPKPYLARALAAPDIYHPDGTTTDDHEHHHLSVLQQHVAFFDRDDNGIIYPWETYEGC RALGFNMIMSFLIALVVNVSMSYPTLPGWLPSPFFPIYIHNIHRSKHGSDSGTYDNEG RFMPVNFENIFSKYARTSPDRLTYREVWQMTEGNREVLDLFGWFAAKLEWTILYVLAR DEEGYLAREAIRRMYDGSLFEYVAMQREQHAKMS</aaseq>

Gene Sequence

<dnaseqindica>1321..1471#1084..1209#909..1003#743..828#482..637#262..367#2..214#accgccgctacacgttgcaactgcgactagtcgatctcatcgatctctcaaaagactacgagctcttcacagggaatcgagtgtgtttcggtcgtttgggccgcgccaagcggaagcggagggatgcaggggacaacgacgaccaaggccgggcgcaacggcgaccgcgccggcaccgaagccccgggcgcgacgagggcgactgacgggaggggcggcgccgccgtggcagcccgcaaggtcggggacatgcgcggcgtgtcgggcgtggaggccaaggactcgctgaccatcgtcgcgctgcagtcgccggtcaccgtcgagcgccccgtccgcggcgacctcgaggaacacgtccccaagccatgtaagcacaaatgcgagatgccttctctagtacacatcttctccatggttcgaatacttcaacaataatacaattagctgaagatggatgcgtctctcgttgtttgatgatcagatcttgcgagagcgctggcggcgccggacatctaccacccagacggaaccacgacggacgatcacgagcaccaccacctcagcgtgctgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatctacccatgggaaacctacgaaggtacagtatatatttgacccaaatgagttactatactaacattcatttgatcgccatcttgcaatcaaatggcatgcatgatcggtgcactgacggaacctgcagggtgccgtgcgcttgggttcaacatgatcatgtccttcctcattgctctggtcgtgaacgtgtccatgagctaccccacgctgcctgtgagtgagctgatcgatcttgggtataacttgagcgatagcatctcaaactccttttttttgaactgtgatcattgtagggctggctgccgtccccgttcttcccgatctacatccacaacatccacaggagtaagcacgggagtgactctgggacctacgataacgagggccggtaatcatacatcctcttctgaatttcgtcactctcgctgctgcccagaatactgatccgaacatttcgtgggggtgcaggttcatgccggtgaacttcgagaacatcttcagcaagtacgcgcgcacgtcccctgacaggctcacctacagggaggtgtggcagatgaccgaggggaaccgcgaagtgctcgatctcttcggatggtaagccatcatcagtcttttaacacactagatgtgttcaaatagacaatgcagtactctcaattgacagatgatactgaaattggttttgttttgctgacgtgtgtgtaggttcgcggcgaagctggagtggacgatcctgtacgtgctggcgagggacgaggaagggtacctggcgagggaggccatccggcgcatgtacgacgggagcctgttcgagtacgtggcgatgcagcgggagcagcacgctaagatgtcctagattagcttagttagctactggatcggtctgtgggtgtgagatcgagcctgtgacgcaggggacatgcaacggtgctctgcctgccggcttaggtctggtgttctctctggactctgggtgataacaaaagaacacccagatgcgtgtcgtgtctgcttgtaattaactttgtatcttgatgcaagagaaataagaataacgtgtggaggatgcgat</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0510900, RefSeq:Os04g0510900