Os04g0513700

From RiceWiki
Revision as of 11:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0513700| Description = Glycoside hydrolase, family 1 protein| Version = NM_001059839.2 GI:297603041 GeneID:4336390| Length = 2398 bp| Defi...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0513700

Description

Glycoside hydrolase, family 1 protein

Version

NM_001059839.2 GI:297603041 GeneID:4336390

Length

2398 bp

Definition

Oryza sativa Japonica Group Os04g0513700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26071114..26073511

Sequence Coding Region

26071114..26071251,26072254..26072334,26072429..26072504,26072615..26072740,26072826..26072913
,26073010..26073262,26073362..26073511

Expression

GEO Profiles:Os04g0513700

Genome Context

<gbrowseImage1> name=NC_008397:26071114..26073511 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26071114..26073511 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgtggcggcggcaacgcgcattgcggtggtggtggtcgcggcgctggcggctctcgcgccgggcgcgcgcgggctccgccgagacgacttcccggtggggttcctcttcggcgccgcgacgtccgcttaccagttgtttcgattcgtcacagctggacgaatctcagatagacgcaacggggatgtagcggatgatcactaccatcggtacacggaagatgtggagattctgcataacttgggtgtcaattcctacagattctcaatttcgtgggcaagaattctaccaagaggtcggtttggaggagttaattcggcaggaatcgccttctacaaccgtctgatcgacgcgctcctacagaaaggtaacccttccgacagatcagattcagatatctatcgcagctatagctggagcatacaaccattcgtgacactgaaccatttcgacattccacaagagttggaaatccgatatggcggctggttgggcgctggaatccgggaggagtttgggtattactcggacgtgtgcttcaaggctttcggtgatcgtgtcaggttctggacgacgttcaacgagccgaacctgatcaccaagttccaattcatgctgggcgcgtaccctccgaaccggtgctccccgccgttcggcagctgcaacagcggcgactcgcgccgggagccgtacaccgcggcgcacaacatcctgctctcccacgccgccgccgtccacaactacaagacgaattaccaggcaaagcaaggcggctcaatcgggatcgtggtcgcgatgaaatggtacgagccgctgacgaattcgacggaggatgtgcgggcggcacggcgtgcgctggccttcgaggtggattggtatggctttgcatgttacctcccttttctttag</cdnaseq>

Protein Sequence

<aaseq>MAVAAATRIAVVVVAALAALAPGARGLRRDDFPVGFLFGAATSA YQLFRFVTAGRISDRRNGDVADDHYHRYTEDVEILHNLGVNSYRFSISWARILPRGRF GGVNSAGIAFYNRLIDALLQKGNPSDRSDSDIYRSYSWSIQPFVTLNHFDIPQELEIR YGGWLGAGIREEFGYYSDVCFKAFGDRVRFWTTFNEPNLITKFQFMLGAYPPNRCSPP FGSCNSGDSRREPYTAAHNILLSHAAAVHNYKTNYQAKQGGSIGIVVAMKWYEPLTNS TEDVRAARRALAFEVDWYGFACYLPFL</aaseq>

Gene Sequence

<dnaseqindica>1..138#1141..1221#1316..1391#1502..1627#1713..1800#1897..2149#2249..2398#atggccgtggcggcggcaacgcgcattgcggtggtggtggtcgcggcgctggcggctctcgcgccgggcgcgcgcgggctccgccgagacgacttcccggtggggttcctcttcggcgccgcgacgtccgcttaccaggtgggttggtcgatcatgggctgctcacatggagggtgggtgtggagcttgcctttccttgtcgatcgttcattcgttcccgcccgtacctaatctgttatagtgaaagatgcccatgccggcatgccccttaagcattagccaccaccatacttagggcctgtttaatttgcgaaaagaaaatttttggatatcacatcggatatttgactggatgtcgaaagggattttcagacacgaatgaaaaaactaatttcataactcgcctggaaaccgcaagacgaatcttttgagcctaattttttttgcggggaaggttaaatctattactcaaacgaatcttttgagactacttaatccgtcattagcacatgtggattattgtagtacttatggctaatcatggactaattaggttaaaaagattcgtctcgtgatttctcctacttgtgtaattatttttttaatatatatttaatgctctatgcatgtgtccaaagattcgatatgatgtttttgaaaaaaaaaattggggaactaaatcaggccttatatttctttttgttggttgtagctttacagacaaggcaacatttggtttctcatgactcatctgtgttctgttcctatcctatgatgtcagtatcattgttcctatcattctccaaacactattagggtgcttgtggcgtttttccttttcttttcattgcatggaaggtgtgcacataaaaaatacagtggtgtccactgccatagtcaaacggatggacatcagtggcaaatgcagccaacacgatttaaattatggtggatggaacgatatacacgaggggcttaatttacaaaattgctctcctttgagctcagatctgcaaatgatggatgcacatattcttctcctctattttgtcgacatcacatctaccactgttctacctaaaatcggaacagttaacacgcgtatgtaattcaagttaacctcttgtttttctctcaaagttgtttcgattcgtcacagctggacgaatctcagatagacgcaacggggatgtagcggatgatcactaccatcggtacacggtacaagagaaaatttacaagccaaagctataacaatgttcatgtgatgcatgatgcatcttagatttataaccgtgcctaatgttccgaacaggaagatgtggagattctgcataacttgggtgtcaattcctacagattctcaatttcgtgggcaagaattctaccaagtatgtcaagatcaacacatgcagtactaatgttcacttcagtactgaagttttacctgcagatcgccatttgatcatatcctcattttgttgttctccaatcctcgcaggaggtcggtttggaggagttaattcggcaggaatcgccttctacaaccgtctgatcgacgcgctcctacagaaaggtaacccttccgacagatcagattcagatatctatcgcagctatagctggagtaagagtaaagtcgtcacattttcatactctaataacaagatgaactgttgcaattttctttctttttctttgtatatgatcaggcatacaaccattcgtgacactgaaccatttcgacattccacaagagttggaaatccgatatggcggctggttgggcgctggaatccggtaacgtacatggccacgtttcctcttctgtaattctgtcatgtcagcttccgctaaggttaatccggtatttacgtatgcatttttcgttttcagggaggagtttgggtattactcggacgtgtgcttcaaggctttcggtgatcgtgtcaggttctggacgacgttcaacgagccgaacctgatcaccaagttccaattcatgctgggcgcgtaccctccgaaccggtgctccccgccgttcggcagctgcaacagcggcgactcgcgccgggagccgtacaccgcggcgcacaacatcctgctctcccacgccgccgccgtccacaactacaagacgaattaccaggtgaccacacacaacacaaccaacccctccttagctgagctcttggctggctagtatgtttcgacgtgttgtctgagatttttttgtgtgtgtggttaggcaaagcaaggcggctcaatcgggatcgtggtcgcgatgaaatggtacgagccgctgacgaattcgacggaggatgtgcgggcggcacggcgtgcgctggccttcgaggtggattggtatggctttgcatgttacctcccttttctttag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0513700, RefSeq:Os04g0513700