Os04g0517000

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Revision as of 11:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0517000| Description = Conserved hypothetical protein| Version = NM_001059852.1 GI:115459433 GeneID:4336406| Length = 2114 bp| Definition ...")
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Gene Name

Os04g0517000

Description

Conserved hypothetical protein

Version

NM_001059852.1 GI:115459433 GeneID:4336406

Length

2114 bp

Definition

Oryza sativa Japonica Group Os04g0517000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26234206..26236319

Sequence Coding Region

26234337..26234476,26235667..26235997

Expression

GEO Profiles:Os04g0517000

Genome Context

<gbrowseImage1> name=NC_008397:26234206..26236319 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26234206..26236319 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaggatgtacgggggaggcgacgtggtggaggaggaggaagacgatagcagtacggtcgccgacggcgctcgcggcggcgcgggtgggtggcccgggtacctctacaccagggccgtcgggagatgcacgccccaaattctggagcagtggagctgagcaatggcccaacatcatccctcaggaagcggcggtgtcgaaggtgttcggctcaaggtccatcgacaggtacgggccacggctcaccgtgctggaggccaccacgaggaccgacgacaatggcagcagcagcgccttcgccaagctcgtcaagcaaggcagcgcggctctgctcaacgcctacgcgcgcaagggcttccccttggactcgtgggaggtgaaggcgctgctgctggaggcgctcgtgtccgaggacgccgcggccgcgcaggccgaccggttcgagcaggccaacgaatcctgcatctga</cdnaseq>

Protein Sequence

<aaseq>MGGCTGEATWWRRRKTIAVRSPTALAAARVGGPGTSTPGPSGDA RPKFWSSGAEQWPNIIPQEAAVSKVFGSRSIDRYGPRLTVLEATTRTDDNGSSSAFAK LVKQGSAALLNAYARKGFPLDSWEVKALLLEALVSEDAAAAQADRFEQANESCI</aaseq>

Gene Sequence

<dnaseqindica>132..271#1462..1792#agagcgtgtgtcagtgtgtgtgtgtgggagagagagagagacagcagaggctccatcggccatggcgctcctccgctccctggcttgcttcctcttcctcctctgctcgtccttcaccttcgaggccgtaaatgggaggatgtacgggggaggcgacgtggtggaggaggaggaagacgatagcagtacggtcgccgacggcgctcgcggcggcgcgggtgggtggcccgggtacctctacaccagggccgtcgggagatgcacgccccaagtaagcatccccattctttcctccatcagtttcttggcttccctctgcataagcagatagaaaagtcatcttttttctgcttattcttatggcatctagaggctatgcgttgttctttagtttagagatcgaatcttgggtagtcccatgtgaagaaaccctttttgtgttattgatttctacttacatttgccaatgcatgcggcatggcaaccggcgggctttgcaaactgatactctactgctggtttctacacgtccaatattcaggaaatgagcaatggatacctgagtttagaaaatacagaagtacaatttttttaggcttgtagtatgtgcaaagcgacctccttttgtggtggggcagatctgaaaatgtccttgcagattttagccaagaaagtccagcacgaatgtcaggtatcctgtttccacaaggttgcaagatggtatttttcggagcccacaaacatttgaaatcccttttcgtgtatgccaagcgtaatcttctactagtactactttgggaggtttatcatctatatcaatgtcatcttgtccctcatttcctgctggggtacacacagtacactttgtgtagctgctttccgtattcacttgtaatgcacacaataaattttgtctcaagaagcgtatattgctgtatttccagcagtagaatagcagtatctctgtattacaagttcgcttgtgctgtaggagtattttcctacaataaatacagcgcaaccatcataacaactctgtgttgtgaggcgtgtactctgtgtcccgcgggcactgggcagggctagccacatgagtttcgttaattgcacgcatctaagcctctaaggccatttcgtccttctcaagcactggttgttgtattttgtggtcttgtggggcgttctgttttgaagaatggtgttatggccttgtgggggttgttatcataataacccagcgcgatccactctagcttatgcattcagatcagatcagcaacccatgtccagtattttggggaagttaatcacagcaatggtttatacaaaccagctgctgctcatgtgcaatgctatctttaccagtttcatgaactgtagtttcataaccaatataggataggagtatatatcaatatctgggacttgaactggtgttctcttccgttgaatgatgtgcagattctggagcagtggagctgagcaatggcccaacatcatccctcaggaagcggcggtgtcgaaggtgttcggctcaaggtccatcgacaggtacgggccacggctcaccgtgctggaggccaccacgaggaccgacgacaatggcagcagcagcgccttcgccaagctcgtcaagcaaggcagcgcggctctgctcaacgcctacgcgcgcaagggcttccccttggactcgtgggaggtgaaggcgctgctgctggaggcgctcgtgtccgaggacgccgcggccgcgcaggccgaccggttcgagcaggccaacgaatcctgcatctgaatcctggatcctaatagcgtgtttgtagtaggtcacctcttctgtgactacctccagcgatcctgaagaaaaatgttggcaccgccgcaccggtgtttaaggtgcaatgtgtgtagtagtagtagattgtatccgtgtccttgtacgcgattgttccttcgatgtgttctggtgccgtgtaggcaacgcgtcgtgtatgttgcttgttagagtgatgtccagccaggcctgctgggccttctcaatcctgtcggtgtaaggcaagttgggatattacgcttacgctgacatttcttttggtacgataacgtactgcctgagc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0517000, RefSeq:Os04g0517000