Os04g0523100

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Revision as of 11:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0523100| Description = Homeodomain-like containing protein| Version = NM_001059879.1 GI:115459487 GeneID:4336435| Length = 5055 bp| Defini...")
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Gene Name

Os04g0523100

Description

Homeodomain-like containing protein

Version

NM_001059879.1 GI:115459487 GeneID:4336435

Length

5055 bp

Definition

Oryza sativa Japonica Group Os04g0523100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26567212..26572266

Sequence Coding Region

26567671..26567721,26567807..26567903,26567997..26568058,26568367..26568455,26568736..26568850
,26569333..26569401,26570384..26570483,26570726..26571024

Expression

GEO Profiles:Os04g0523100

Genome Context

<gbrowseImage1> name=NC_008397:26567212..26572266 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26567212..26572266 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagatgatcctagtctagactttggtgaatttcctcagccattctgcagccagcaagttgtttcatttcagccaagcgtgacaactagtgggtcaggaggcatgccagtgtacctggactgttccagtgggatggacagcaacacggtgatgttgagcaccacaccttctgtggttgtctccaccacttcgtccaatacggttgctgatcccgggcagaacctcaaatatggagggcccctggcagctgattggtcacgtcttgagctcgatgtgctgaaagatggcctccagaaatatggaaatgaacaaggcatcatgaagtatataaagatagcagcttcattaccaagcaagactgtgagagatgtcgcaatgaagtgtcagtggctagggaaaagagaaaattcaaggcggcggaagtctgaagaccatcacactggaagaaagatgaaagaaagaaaggctaaaatggccgagccttccttatggggtaccaatcatccagttcagacggacacaagagttccttcgtttgtgtcacataatgccattcaaaacaaccaaattctaactggagccactggaatagatcgtgcaatgcagcatttactagtaccaaatgatcgacttcttgatcagattgaagcaaatatgctagcatgtcagccgcaaaacaatattgaactcttccatcggacaagaaggaacatcaatggtcttctgcaaaccatgaaccaaatgcctgggataatgagtaagatgcctccgttgcccgtctcggtgaatgaaaatcttgctagcttcgtacttcctggtcttacagtgccacaatttctcggaggcagccaattgaaggaggaaccaagaggatggtaa</cdnaseq>

Protein Sequence

<aaseq>MADDPSLDFGEFPQPFCSQQVVSFQPSVTTSGSGGMPVYLDCSS GMDSNTVMLSTTPSVVVSTTSSNTVADPGQNLKYGGPLAADWSRLELDVLKDGLQKYG NEQGIMKYIKIAASLPSKTVRDVAMKCQWLGKRENSRRRKSEDHHTGRKMKERKAKMA EPSLWGTNHPVQTDTRVPSFVSHNAIQNNQILTGATGIDRAMQHLLVPNDRLLDQIEA NMLACQPQNNIELFHRTRRNINGLLQTMNQMPGIMSKMPPLPVSVNENLASFVLPGLT VPQFLGGSQLKEEPRGW</aaseq>

Gene Sequence

<dnaseqindica>4546..4596#4364..4460#4209..4270#3812..3900#3417..3531#2866..2934#1784..1883#1243..1541#accaccaccaccacctccaccaccatcagtgtccatcaaccacccaccgcgctcaccgtcacaccccgctcgcccgcgcgcgcgcgcgcgcacacacacgagggaccgatcgatcgatcgctccaggcgatcgagtcgcactgaagctgcttgaagagcttggcgatctctcgctccctgcagattagatcggtttcaacccggtaattttaagctggtttttcgttttacggtttacccgtgtgttcgttcattcgatgcttaggatcgggttcttgcctatactgctggtcgattgattgggctagctgtggattatggtagtgttgatttttgttttcttggtttgcttctctgattctctctctatcgtgccatatgaactgcagtgtgcaaagccaggttagttcatgggggcggcagtttcgggttttgcatgcatgtctgtgtggtttggctttacgcaatcattggtgggtttgggttttttttactaggtctttttctatgggcttatgaactgtatgcaggagcagattggccgggtccttgtccgcgagttactttctttgatttgattctttcatcgaattctgttgctttcttgttactgggggccatgcgacatgcggatagacactgactgcccgactgggttatatggctgtgtgctctgatccgcatgagacgatgagagaaaatcgtccaaattttgcctgttgatctggttctgtagcgaggatttcgtctgtggcgtgcttcacatgaaagagagtagaattggctgaattatgaggattacatggcaaaagggagaaaaataatctattgctttgaaaatattgatactctgatcttttacaagtgaagtaaacctgcgttgcagagtacaattgtgttccttaagcatatttctttttgccaagcaaagaaattcgacatttctatcttcatggaagattggctcgatactagtttcctctattgagttttatttctccaaattccaaggtttcagcttccttgacgtgcttagttccatctgcagggaacaatatattgtggaagtacacaaactttttgagtatcgttacaaagagtccatgcttggatgagtacctggagcagtaggtaccaaagtcgtccattctgcattgtggagttgctctggatcaacttggagtgcgtccttcgaaactggaaataccaaattccgttctagataatttgctgggcgcgcagatggcagatgatcctagtctagactttggtgaatttcctcagccattctgcagccagcaagttgtttcatttcagccaagcgtgacaactagtgggtcaggaggcatgccagtgtacctggactgttccagtgggatggacagcaacacggtgatgttgagcaccacaccttctgtggttgtctccaccacttcgtccaatacggttgctgatcccgggcagaacctcaaatatggagggcccctggcagctgattggtcacgtcttgagctcgatgtgctgaaagatggcctccagaagtaagctacttccacttatatgattgtaatcttatgcaaattcagagcatgtggtctaattaaattgtctaaacttatgcaaactcagagcatgtgttagtccaatcgatagaggttttactattccattggttgatgttggaatatctttttcctggtccatgttttttattcactggaccatccctcatgtgtgtcctttattttgttctcattgggacgccaatgatgaatatacacagatatggaaatgaacaaggcatcatgaagtatataaagatagcagcttcattaccaagcaagactgtgagagatgtcgcaatgaagtgtcagtggctaggggtaagcaatctctaatatgtatatactctgtaagttgtagtcactcgaacataatatctgcattccctttcccgattacaaggatgccttctgtttgaggtttgctcgttacataattgacaatattcccttaggtacaaccgttcaggcagacaatattcccttttctccttgagcagtttttggatggggcttgctatgcctcattttttttctctgaatatgctaatatgaatgatagatacacttcttctcaatgattatgtacataaatgcgaaagttgcacattttggaccatagtcatattgagacatgagttggcaatcaatttctccttgtgggctgttattatattgatatacatttgtattgtccaaaaggaaaaaaggtagatcaaaagacagcacattcttataccatttttttttataaaaaacatgcatatatctttttgccagtgatatatcttttggacccaccatattattagttacgatagctgactaggcaattgcctgaattattgtctgatactgcagttcttagttttctttctattgtgttggcgttccagtttttttttttagtttgccgggctatggttcctgccacagtctaattcgacagcctcctgtcgttgcaagcgaaaactacttgtactttgattttattcctctcaatcttaatgaaatttggtcgccggttccttcggctgacccggcaaaaaaaaatattgtctgatactgtactgaaaactaaaggtgtggttcctctttggatcagtatattgtttgtgataaaatcaaaatgggctttatattcttcaaaagttttattaagaatatagctaactaaacaacagttatatatatttaagatgcgcgtgtgcgtttcctagctgacctagtactttattttcttttattagtagttcttttttttatttttaataataataataatgatttggttctcttgcagaaaagagaaaattcaaggcggcggaagtctgaagaccatcacactggaagaaagatgaaagaaagaaaggtattaacgttcctaatggttttctgattaatgcaactgattcagtaacacgtttagccccgtttccaaaaaaaaaaaaactattggtcctatttgaacaacttaggctgtgttcctttgtgtgtgttgagaacccatttcctgcccacggaaaacggagcggtctattagcacgtgattaattaagttttaactatttttttttcaaaaatagatcaatatgattttttaagcaactttcgtaaagaaactttttacaaaaaacgcaccgtttagcagtttgaaaagcgtacgagcggaacacgagaaatgtgagttggaaaagttggggaaagaactcagccttataattgttttaactgatttatcaaaaatagaagttttgaagtacataacaaatagcagacctaactatttagccctgggcatttcgtacttcatgcacatgtttttgactggtgtaataatggttattttttcaggctaaaatggccgagccttccttatggggtaccaatcatccagttcagacggacacaagagttccttcgtttgtgtcacataatgccattcaaaacaaccaaattctaactggaggttggtaggtcacttgagtatcaggtccatttttctagaatgtaaaaccatctgctgtgggtccaacgcatgataatccttcatttcgattatgctcttgggagagtaaataataaattaacggattagcagatgcaatttaaataagatattagaattatgcgctgatggaaagattcataagaactggtttttgacaagattaagctgatgacttttcatacacatattacatatatgttccttaatttgaccatgtgcgtatttttctaacatgcagccactggaatagatcgtgcaatgcagcatttactagtaccaaatgatcgacttcttgatcagattgaagcaaatatgctagcatgtcaggtaggtgtatatttatcttacaaagaatggtgtttttttgttcatcgttccagttattctaggttgccaggactgttgtactgtagcgatcctggttgccagtactgttgtacttccgacagttttcccctaatcttaataaacttcggtcggcacttctttgccgacccgatgaaaaaaaagtaattctaggctatgttcgcgcaaaaccatattggagaggtgcatcgatcattatgaaaatgcgctgtgttaaacatatttcccgttaattacatggatttcactctaattactatttcttccagccgcaaaacaatattgaactcttccatcggacaagaaggaacatcaatggtcttctgcaaacgtaaacatattccctctctgatgcatgcagaattttggagttatgcttgtagtatagattcactgtctctaattgtgtttcttctataaacagcatgaaccaaatgcctgggataatgagtaagatgcctccgttgcccgtctcggtgaatgaaaatcttgctagcttcgtacttcctggtcttacagtggtaagtactcaaggtcctgtgactattcgacacacagtatggaaattttgttttacctgttaatttgatttcctttcattcttagccacaatttctcggaggcagccaattgaaggaggaaccaagaggatggtaagtcactgccaacaggttgcacatgaagcaaacgtttaaactccatcacaaacttagtgaaatatttgggaattactgctgtcagatggtgatgactgatgagtagaactaccagggatcctgctttctctatcagaaggcgaaggggaggtaactgtaaccaatctgctgctcggcctccactgacatgggttgaacgtacgccccagctggccagcgacaagcctgtaaaactggtggctgaacagtaatatttcaggaaacttcagttttgctcgtcttggtgcacctgcacatattgaatttttttttcttttcgatttctcatcctgtcagtttctcagtatagtgaatagaggatgtagaataggaagttagttaataataagtactagctagctagctagctattagctaagcttagcaaaagaggaaaaaaaaggcctttttgcccgttaac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0523100, RefSeq:Os04g0523100