Os04g0524500

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Revision as of 11:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0524500| Description = Oligopeptide transporter OPT superfamily protein| Version = NM_001059885.1 GI:115459499 GeneID:4336441| Length = 394...")
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Gene Name

Os04g0524500

Description

Oligopeptide transporter OPT superfamily protein

Version

NM_001059885.1 GI:115459499 GeneID:4336441

Length

3944 bp

Definition

Oryza sativa Japonica Group Os04g0524500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26635257..26639200

Sequence Coding Region

26635455..26636567,26636639..26636828,26636935..26637069,26637181..26637278,26637371..26637534
,26638667..26638798,26639143..26639200

Expression

GEO Profiles:Os04g0524500

Genome Context

<gbrowseImage1> name=NC_008397:26635257..26639200 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26635257..26639200 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcctggagctggaagccttgtaagtggaacagagacagtcagctccagccactgctcctcggcttcttcttcgtccgcctctggacggcggccatcgagagggtggggctcctccggcagccgttcacgcgccaggagaacaccgtcatccagacctgcgtcgtcgccggctacgacatcgccttcagcggcggctttggtaactacatattgtccatgagtgaaagaatcgctgggctgggaaccgaggcaaataatgctcaaaacataaaaaatccccatctaggatggataattggttttctgttcttggtcagcttcattgggctctttggtcttgtgcccttgagaaaggttatgatcattgactacaagctaacttatccaagcggcactgcaactgccttcctcataaacggctttcacacgccccatggagccaagattgcagcgaagcaagtaaagaaactcggtatattcttcatcctcagcttcttctggggtttctttcagtggttctacacagctaccgatgattgcggattccataaattcccatcactaggccttcaagctttccaacacaagttcttctttgacttctcacctacttatgtcggagtgggaatgatttgcccacacattgttaacgtatctgttctccttggagggatcctctcatggggcatcatgtggcctctcatagccaagaaaaggggagattggttttctgctgatctccctgacggtagtcttcatggaatgcaagggtaccgggtcttcatagccattgccttgattcttggggatggcctctacaactttctcaagatgattattctcacagccttctcgctaagatctcaaatcaagaagaaaaatgctagtacacttccagtctctgatgatggcatggttaccactactgcagctgtctcatacgacgaggagcggcgcaacgaactctttgtcaaagatcaaattccatggtacgttgcatatggaggctatgctgttgttgctgccatttctatcggtactgtcccgcagataatcccacagctgaagtggtaccaaatcttggtagcctatatcgtcgcgccaattcttgccttctgcaatgcctacggaactggcctcactgactggtctcttgttacaacctatggaaagcttgcaatctttgcatttggtgcatggaccggtgcttcacatggtggtgttcttgctggcctggctgcctgtggtgtgatgatgaacattgtgtctactgctgctgacctgatgcaggacttcaaaacagggtacctcacactggcctcacccaggtcaatgttcgtcagccaagtcattggcactgcaatgggctgtgtcattgctccctgtgtgttctggcttttctacaaggcctttgataatattggcatcagtggcagcgattacccagcgccaaatgctgccgtcttccggagcatagcgatactaggtgttgatggcttctcctcgcttccaaagaactgcctcaatctctgttacgcgttctttgctgctgcaattgtcgtcaacctgataagagatcttgtgccaaaggtgtcaaggtttataccgatcccgatggctatggcgatacctttctacataggatcatatttcgcgattgatatgttcatcgggacagtcatattgtttgtctggcaacgagtggacagggcgaaagcagacacgtatggacctgcagtcgcttcaggcatgatatgtggtgatggaatttgggttttgcctcagtcggtgcttgctcttgccaaggtgaagcctccaatctgcatgaagtttctgtcgagaaggacgaatgacaaagtggatgcttttcttacaacattgggaaaataa</cdnaseq>

Protein Sequence

<aaseq>AWSWKPCKWNRDSQLQPLLLGFFFVRLWTAAIERVGLLRQPFTR QENTVIQTCVVAGYDIAFSGGFGNYILSMSERIAGLGTEANNAQNIKNPHLGWIIGFL FLVSFIGLFGLVPLRKVMIIDYKLTYPSGTATAFLINGFHTPHGAKIAAKQVKKLGIF FILSFFWGFFQWFYTATDDCGFHKFPSLGLQAFQHKFFFDFSPTYVGVGMICPHIVNV SVLLGGILSWGIMWPLIAKKRGDWFSADLPDGSLHGMQGYRVFIAIALILGDGLYNFL KMIILTAFSLRSQIKKKNASTLPVSDDGMVTTTAAVSYDEERRNELFVKDQIPWYVAY GGYAVVAAISIGTVPQIIPQLKWYQILVAYIVAPILAFCNAYGTGLTDWSLVTTYGKL AIFAFGAWTGASHGGVLAGLAACGVMMNIVSTAADLMQDFKTGYLTLASPRSMFVSQV IGTAMGCVIAPCVFWLFYKAFDNIGISGSDYPAPNAAVFRSIAILGVDGFSSLPKNCL NLCYAFFAAAIVVNLIRDLVPKVSRFIPIPMAMAIPFYIGSYFAIDMFIGTVILFVWQ RVDRAKADTYGPAVASGMICGDGIWVLPQSVLALAKVKPPICMKFLSRRTNDKVDAFL TTLGK</aaseq>

Gene Sequence

<dnaseqindica>2634..3746#2373..2562#2132..2266#1923..2020#1667..1830#403..534#1..58#gcctggagctggaagccttgtaagtggaacagagacagtcagctccagccactgctcccatggcgaccgttcctacgccgagcgaggcccacggcggcgcgacgccgacggccgccgacgtggagatggtggaggcgagcgagctccgtcggcggggcaagcccagcggcgaccgtgcgacggggccgtcccgagacggggccgccgcggcggcggaggaggcggcggcgccgtcggtggagcgcgtgttcgcggacaggcccgtgccgtcgtggcgggagcagctgacggtgcgcgcgttcgtggtgagcttcttcctggtcatcatgttcagcgtcatcgtgatgaagctgaacctcaccaccggcatcatcccgtcgctcaacgtctccgccggcctcctcggcttcttcttcgtccgcctctggacggcggccatcgagagggtggggctcctccggcagccgttcacgcgccaggagaacaccgtcatccagacctgcgtcgtcgccggctacgacatcgccttcagcggtaaatcctttttcacatcgtaccctttaccagtattctccgattcttgtgctatcttgtccatcaatttcgctgctgtagaaaattcttccttttcatggcgatttaaacttaccttttcttttaaccagaggcgatctaatttactactgattgtctgtcttagtccattttgttggaggcgatctattttactactgattgtctatcttagtcctttattttgttctttgtgttattggatcagtgggtgcatatagtatattaaaatatatcggaaaaagtacgaaaatatatccgctagtagttacttctagataggccaaaatagcgaaatggtttttttcgcgggctggtcacggtcaatattccaaatgatgaagagcgacatgcttggaagtaacaaagttcagatatagacatatagtaccagtatttctcaattgctacaattttttatgtacaaggtcttctgtttctaccagcttttatttcttaaaggaagagtctgcgagactgtgacatgctattatcatttaatctactggagtaatgatcaaatagattaaaattaagtattaatattgacgatgggcagtagtactagacaactgaaaatgaggttcccatcaacagtccgtgttcattttttcttcagtccaaagggactaattgagagtagaagctgtacaaggaccgaaaaccagaaaacaccaaaaaatataaaaaatctatgaagctaagctcatttttctaccaatactttaagtgcttgttatagtatcaaaacaaaactgtaagtcaacattagcatagctagtctagtattctatcaaaaatcagtgtagaaataagcaatccctccgttttatattataagtcgtttgacttttttcctaaccaaattttattaagtttgattaagtttatagaaaaaattcgtaatatctaaaatatcaaaataattttattaaatctaacattgaatgtattttcatgatatgtttattttgttataaacttgatcaaaattaaaaaagtttgactaagaaaaaattaaacggcttataatatgaatcggatggagacatggagtacttatttcacatggtaacttctccatttatttcaggcggctttggtaactacatattgtccatgagtgaaagaatcgctgggctgggaaccgaggcaaataatgctcaaaacataaaaaatccccatctaggatggataattggttttctgttcttggtcagcttcattgggctctttggtcttgtgcccttgagaaaggtcaagttattctatatcctccatccattttttctttaagcaaccatatggtcatgtggacatcattttaaccaaattcaacacctcttcaggttatgatcattgactacaagctaacttatccaagcggcactgcaactgccttcctcataaacggctttcacacgccccatggagccaagattgcagcgtaaatattgaatacctaccctcatttgtccatgactccatgttcatctatgtgcgctcttcagatatgcatggtgtgatttatattggtatttgcctgcttttttttcaggaagcaagtaaagaaactcggtatattcttcatcctcagcttcttctggggtttctttcagtggttctacacagctaccgatgattgcggattccataaattcccatcactaggccttcaagctttccaacacaagtaaagattgcaaccctgcaagaactcatccaacatcattttttagttctgaaaaccgcattcttttccgttctactcttatatgaacattgtttttcttttgaaggttcttctttgacttctcacctacttatgtcggagtgggaatgatttgcccacacattgttaacgtatctgttctccttggagggatcctctcatggggcatcatgtggcctctcatagccaagaaaaggggagattggttttctgctgatctccctgacggtagtcttcatggaatgcaagggtaccgggtgagaatacgttcttatatagaatgcttattactgagcttttctgctactaagtccagttgttgttacaggtcttcatagccattgccttgattcttggggatggcctctacaactttctcaagatgattattctcacagccttctcgctaagatctcaaatcaagaagaaaaatgctagtacacttccagtctctgatgatggcatggttaccactactgcagctgtctcatacgacgaggagcggcgcaacgaactctttgtcaaagatcaaattccatggtacgttgcatatggaggctatgctgttgttgctgccatttctatcggtactgtcccgcagataatcccacagctgaagtggtaccaaatcttggtagcctatatcgtcgcgccaattcttgccttctgcaatgcctacggaactggcctcactgactggtctcttgttacaacctatggaaagcttgcaatctttgcatttggtgcatggaccggtgcttcacatggtggtgttcttgctggcctggctgcctgtggtgtgatgatgaacattgtgtctactgctgctgacctgatgcaggacttcaaaacagggtacctcacactggcctcacccaggtcaatgttcgtcagccaagtcattggcactgcaatgggctgtgtcattgctccctgtgtgttctggcttttctacaaggcctttgataatattggcatcagtggcagcgattacccagcgccaaatgctgccgtcttccggagcatagcgatactaggtgttgatggcttctcctcgcttccaaagaactgcctcaatctctgttacgcgttctttgctgctgcaattgtcgtcaacctgataagagatcttgtgccaaaggtgtcaaggtttataccgatcccgatggctatggcgatacctttctacataggatcatatttcgcgattgatatgttcatcgggacagtcatattgtttgtctggcaacgagtggacagggcgaaagcagacacgtatggacctgcagtcgcttcaggcatgatatgtggtgatggaatttgggttttgcctcagtcggtgcttgctcttgccaaggtgaagcctccaatctgcatgaagtttctgtcgagaaggacgaatgacaaagtggatgcttttcttacaacattgggaaaataagttgcaacaacgattctgatgaagaaaagattcagttgaacattattacattagcccgtgtatatattggataattttctttttttttccagcagatccatgtcagtaagaatccaatgaagtgtggcatactatacgatagtagataaataagtgtgtacagagacaagaatgggaataaattatcttgtttacgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0524500, RefSeq:Os04g0524500