Os04g0525000

From RiceWiki
Revision as of 11:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0525000| Description = Conserved hypothetical protein| Version = NM_001059890.1 GI:115459509 GeneID:4336446| Length = 1801 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0525000

Description

Conserved hypothetical protein

Version

NM_001059890.1 GI:115459509 GeneID:4336446

Length

1801 bp

Definition

Oryza sativa Japonica Group Os04g0525000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26656535..26658335

Sequence Coding Region

26656861..26656946,26657038..26657083,26657168..26657248,26657359..26657445,26657568..26657657
,26657759..26657950,26658082..26658288

Expression

GEO Profiles:Os04g0525000

Genome Context

<gbrowseImage1> name=NC_008397:26656535..26658335 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26656535..26658335 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagagcctgcagccccgcgttgaggctgcagctgccgccgaacccgccgatcacgccgcagctcccgagctgcaggactcactccgctggcgccaggtgcagaggcttcgccgccgcccactcgcagccgcctgcagccgggcgcccggacgagcctgccgcggagccgtcaccgaagcaaccggagatcgcgcagacgcagaacctcaggaggagccgcaggagggggccggggtcgcggcagagcctcgtgtccgtcgggacgtcgtgcggcggaggggatcagtggagcagcgacttcgacctgacgctgcggcagctgcacctagacgacctcatcgaagacggccagaacgacgacgccgacgtcctggtgcacctcctagttcagcagcatactcagtttggaatgtcaatcaaaggccgagtggtcacgtccttcagcaaaatatgcgattcctgctcctcgccgtactgcgcaaagattgatgagcagttcaacctcacggtgctgtcctcaaccaggaaagaacagagtgagatgcctgatattggagacagcgatccatctgttatctacgtgagaccaggtgtagaggttgatcttgactccgtgatccaagagacgatacggctaacggcatctgccaagagttcatgctcagaggcatgcgaaaaatctactgtcgtatggcaatatggtggtaaccagaagaagcgttacagccaacggtggtcgaaacttctggacctgaagaaaactctggataaggcggctaactga</cdnaseq>

Protein Sequence

<aaseq>MARACSPALRLQLPPNPPITPQLPSCRTHSAGARCRGFAAAHSQ PPAAGRPDEPAAEPSPKQPEIAQTQNLRRSRRRGPGSRQSLVSVGTSCGGGDQWSSDF DLTLRQLHLDDLIEDGQNDDADVLVHLLVQQHTQFGMSIKGRVVTSFSKICDSCSSPY CAKIDEQFNLTVLSSTRKEQSEMPDIGDSDPSVIYVRPGVEVDLDSVIQETIRLTASA KSSCSEACEKSTVVWQYGGNQKKRYSQRWSKLLDLKKTLDKAAN</aaseq>

Gene Sequence

<dnaseqindica>1390..1475#1253..1298#1088..1168#891..977#679..768#386..577#48..254#agttgctggagcatctcagcttccaggagcgcgagagaaaatcgatcatggcgagagcctgcagccccgcgttgaggctgcagctgccgccgaacccgccgatcacgccgcagctcccgagctgcaggactcactccgctggcgccaggtgcagaggcttcgccgccgcccactcgcagccgcctgcagccgggcgcccggacgagcctgccgcggagccgtcaccgaagcaaccggagatcgcgcagacgcaggtgcagactctacgtacgtgcgcatcttgttctagactggaactcctcctgagttttcagtgctcaaggagttagaggtagagagtagctcgatcattcgtctgatgtgctggctcgctgcttggtttcagaacctcaggaggagccgcaggagggggccggggtcgcggcagagcctcgtgtccgtcgggacgtcgtgcggcggaggggatcagtggagcagcgacttcgacctgacgctgcggcagctgcacctagacgacctcatcgaagacggccagaacgacgacgccgacgtcctggtgcacctcctagttcagcaggtaggttgatcgagcaagccgcgagctagtgagatttaagtaggtaaacggatcagaatacagggcctgactggtaattggtgtgtgagatctgcttccagcatactcagtttggaatgtcaatcaaaggccgagtggtcacgtccttcagcaaaatatgcgattcctgctcctcgccgtactgcgcaaaggtgcaattctctcgcttcaaaccttctactagtatgcaagttctgacaagcaagaaacgttgtttgggacactgttgcacttatagaaagcattgaatggtagtgtgcttttgttattgcagattgatgagcagttcaacctcacggtgctgtcctcaaccaggaaagaacagagtgagatgcctgatattggagacagcgatccatctgtacgtctgtcagtttcatactttcagcgaacagcaacataaagttgaaaaacccaattattgtcactcaaccttaaaatgtggcaactacatcctctacttttgagcaggttatctacgtgagaccaggtgtagaggttgatcttgactccgtgatccaagagacgatacggctaacggcatctgccaaggttttccctgacagcaagtcgtattgaccccttttcttcacgggcacctcttactgattaaattaatttatggacgtcatgcagagttcatgctcagaggcatgcgaaaaatctactgtcgtatggcaatgtatgcacttacctgaactagcttcaatttatttccagttagtgatgcagacagagatcattgaaacgctttctcatctctgaatccacagatggtggtaaccagaagaagcgttacagccaacggtggtcgaaacttctggacctgaagaaaactctggataaggcggctaactgaaccacgacgcacattcattcaacagaatgaacacatgctagtacaaaatgagtcaaatgacgctggaacccaagacgcagcggattgctctaccaaaatacaagtgtttctggctatatatcttatatccgaacaaggaacggagggtgtagcagagaaacaagctgcatcgcaacccgctagctcttcgatctgatcatctgaatcctgtgtatagaactgtgccatgtatacgtatagatgacaataaacatcactggacacgattagccagttagcacactgtaaattttttggggaaaaatgaatcagagtttctgccattt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0525000, RefSeq:Os04g0525000