Os04g0527400

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Revision as of 11:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0527400| Description = Conserved hypothetical protein| Version = NM_001059902.1 GI:115459533 GeneID:4336460| Length = 4147 bp| Definition ...")
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Gene Name

Os04g0527400

Description

Conserved hypothetical protein

Version

NM_001059902.1 GI:115459533 GeneID:4336460

Length

4147 bp

Definition

Oryza sativa Japonica Group Os04g0527400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26762698..26766844

Sequence Coding Region

26763676..26763928,26764027..26764098,26764186..26764244,26764338..26764473,26764605..26764701
,26764793..26764859,26765232..26765420,26765513..26765665,26765854..26765957
,26766090..26766201

Expression

GEO Profiles:Os04g0527400

Genome Context

<gbrowseImage1> name=NC_008397:26762698..26766844 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26762698..26766844 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttgtgggctgtcgagggagaaggacgccggcggcggcccacggcggcggccggggagcgtcggcgacgtggtcgtgttcctcccggggctccgggtgccgaggagcgtggacttctcccaggcgctcgccggtcgcctcgacgaggcctcgtcgaggctgtcgtcgctgcgggcgcgggtcgtcgacatggcaatgcaagaatcggcggcggcgctgaagccgaagcggcgggcggcggcgcggcacggttcgagcactgctaatctcctacaggctctggaagactatctgccagtgctgctaggattggtgaaggaaggtagcgaattgcggcacggagtgcacttcgtctggactaaccaagaggataatgctgaggaaacggccatggcagatgcatggtatgaagtgttgtccgttctgcatttgatggccatggtctgcttgttgcaggccaattctctgcttcttcccaggtcatacggtgatggttatgcgccaagggtttctgaagagagcagacgagctactgttgatgttttcttgaaggcatctggctacctagactgcgcaattagacaagtactaccccaaatatcgtcggagttaaggagacaacttccagtagatctggctgaaggaaatctcaaagctcttagcctgcaagctctgggtcagggagtcgacatgcaacttggtctggcaattgatagcccaaaggccactctagcggtaaaacggcgcttagcttgcgagatggtcaaatattggcatcaaattcaggagagcattccagaaattccggtatccgatggatgggggaaaaagcatttattgtttgttaagtggaagtatgttgaagcaaaggctgcagcatactatttccatggtttgattctagacgagggaaacacagagaaatctcatggaatggcagtagctgccttgcaagcttcagaagaatttctgaaagaaagcaaaagggcttctgaagccttccatgcaactcctccaacatcaaggagccccactcctttcggaacagctaagtacatgcttgacaagattccaaaagatgcttcaagcaaggtcaagatcaatcaggacctgtatacgcaagagagggtcattggaacaccgcctccattgccggattttgcgttggctctaaaacctgacgactacgatcttcctccattagatccactttggaacaaagaagacagccgtcagtag</cdnaseq>

Protein Sequence

<aaseq>MGCGLSREKDAGGGPRRRPGSVGDVVVFLPGLRVPRSVDFSQAL AGRLDEASSRLSSLRARVVDMAMQESAAALKPKRRAAARHGSSTANLLQALEDYLPVL LGLVKEGSELRHGVHFVWTNQEDNAEETAMADAWYEVLSVLHLMAMVCLLQANSLLLP RSYGDGYAPRVSEESRRATVDVFLKASGYLDCAIRQVLPQISSELRRQLPVDLAEGNL KALSLQALGQGVDMQLGLAIDSPKATLAVKRRLACEMVKYWHQIQESIPEIPVSDGWG KKHLLFVKWKYVEAKAAAYYFHGLILDEGNTEKSHGMAVAALQASEEFLKESKRASEA FHATPPTSRSPTPFGTAKYMLDKIPKDASSKVKINQDLYTQERVIGTPPPLPDFALAL KPDDYDLPPLDPLWNKEDSRQ</aaseq>

Gene Sequence

<dnaseqindica>979..1231#1330..1401#1489..1547#1641..1776#1908..2004#2096..2162#2535..2723#2816..2968#3157..3260#3393..3504#agtaaacatctctctctgcctctctctccatctgactgctcgaccagcagcaataggctctggtttcctcttcttgcaagttgcatgctccctagtccctagacttgaacagttgagcccttcctgattttgtggttctagaccacctctggcttgcagcgagaagcaacgttcgctcgcatgacgttccagctccaagattaggtaggttcttggtttcctccggattttccagcttcgtttccatgatctttgagaaaagtttgcgaatgcactttgtcgatttttttaaactgcagtagaggtacgctgatatcagaggctaaatatcggatgacgcattgcaattgcaaccctttcctaagtttttttctttctttctgatggcacaagttggaggaactgttctaaacacagaataatactacctctttcgatgcgaaaagtatgccaatttggccgtacattacgccaagttgtgctcttgctctgatgttgatcggtcccctacgaaccaagggataagagttttgcttccttttgtccctccactgtgtttgcgttcggtgtggtgctgcgcgccagcctgcagaagaagaagaagaagaagaagaagagaagatagtggtggtgggttcaatcagagcggttcttggtgtctgaagaaacgcacaaagccgaagtggaaggaagaataaaggcaagagcttttctccatcgcctcacccttttttttttgttcttgttcgatggaattctctctctccaattgcgaaattaccgtactcgcttacaagttgtagttttatttttactcaatttgataagtttcattcttttataccttatcttggttttacccttttggatggttccggcgagtaactgatattttttcgattgctgggtgttctattgcaccgtggttcttgcagggtgaggtgagctaagtcgtaggctgtctgccgcgcgcgtaccatgggttgtgggctgtcgagggagaaggacgccggcggcggcccacggcggcggccggggagcgtcggcgacgtggtcgtgttcctcccggggctccgggtgccgaggagcgtggacttctcccaggcgctcgccggtcgcctcgacgaggcctcgtcgaggctgtcgtcgctgcgggcgcgggtcgtcgacatggcaatgcaagaatcggcggcggcgctgaagccgaagcggcgggcggcggcgcggcacggtgagtgagggtggtggtggtagcgcatctgaattgctggctggttttgcctgcaaaatttggattggttctcatttctttggttattttttctacaggttcgagcactgctaatctcctacaggctctggaagactatctgccagtgctgctaggattggtgaaggaaggtgaggaattgctccgatatggtggattggtgttctgttggttgacaatcttgttgtttcgtttgattcagcctgtgaactctgcaggtagcgaattgcggcacggagtgcacttcgtctggactaaccaagaggataatgctgaggtatgtgttgggtcctaaaaatgtggtgtgtcatcttcctccatgatgcccgacagtagccattagatctaacattggaattgccaactgcaggaaacggccatggcagatgcatggtatgaagtgttgtccgttctgcatttgatggccatggtctgcttgttgcaggccaattctctgcttcttcccaggtcatacggtgatggttatgcgccaagggtttctgaaggtataaaactgtttttctgaacttctgaagcaatatgggcatatgaaaatgttcatgtcctgctttccattgagttacttctttcagtgtttttgtgctaataatgcaccatgtattgccaatgtacacagagagcagacgagctactgttgatgttttcttgaaggcatctggctacctagactgcgcaattagacaagtactaccccaaatatcgtcggagttaaggttatgaacttttgagaagctgagtagatgattttgaggatttaagctgaaagaaggtgtattgacatccatttcaatgtatgcattacaggagacaacttccagtagatctggctgaaggaaatctcaaagctcttagcctgcaagctctgggtcaggtacaattttctgggctcagctcatttggctctttcgtaaatgaactcaagaactgcattcctaaacctaatgggcattacatttgttgtagtactttttatgaagctgaaacttttatgctatagtcccaagtgacatatttgctatattacccctgaagctcctatattctgattaggaatgatgcttagtaatctatttgcattttttctgtgggctgaagtagaaactattagcactaattcaatttatagcaaatttcatgattcactgttctacattggtccaagttattctcggtgcagtggtgctttctctggtcagtaaatttgatatcatgtcctgagcaatcggtaatctttgacctatagggagtcgacatgcaacttggtctggcaattgatagcccaaaggccactctagcggtaaaacggcgcttagcttgcgagatggtcaaatattggcatcaaattcaggagagcattccagaaattccggtatccgatggatgggggaaaaagcatttattgtttgttaagtggaagtatgttgaagcaaaggtgtgtaagttggtttaacctttattttcctgatgttaaattacttcaagttgcaattgtacgtctcaaaactaatgtgcactttttttcaggctgcagcatactatttccatggtttgattctagacgagggaaacacagagaaatctcatggaatggcagtagctgccttgcaagcttcagaagaatttctgaaagaaagcaaaagggcttctgaagccttccatgcaactcctccaacatcaaggcaagacattttaccttttgagcatttcgcttttcaaattttcttatgttttattctcagcataagaactttaccaagatggtaaactgatactactcagtatactgtttaatgaatagctattgctgttcagtgtaaaaatccactcttaagcatggatactgaagtcaatacctggaattttgcaggagccccactcctttcggaacagctaagtacatgcttgacaagattccaaaagatgcttcaagcaaggtcaagatcaatcaggacctgtatacgcaagagaggtactaagaatttgtggtgtaatatgcatacaacaaaatttcttgcaacataaatagtactacatctagtgatgttcagggtattgtgaacctcaataagtgatgaattttttcgttgtggggaatctgcagggtcattggaacaccgcctccattgccggattttgcgttggctctaaaacctgacgactacgatcttcctccattagatccactttggaacaaagaagacagccgtcagtagcagtatattcagcaagaatgtgaatgttgtctttcagaggttcaggctctagtataccatgtcgaagccagacgtggtacgaatgaagtgtacaaaatttgtcccaacaaattgtggtgtcagcaaaatttaaacaaggcctggagataatctcaagagcattgtacaggcgaatcttattctgacaaaggaaatgctttgccaaaaaaaaaagaagaaaaaaactaaccatttcaaaagattccaatatgactcgtggatccattttctcaggattcccttcagaatggcttggttttgatctatactgagtactgtgaaaactgtcacattttgatcctgctgcagcgactatatcatctagacagtttccagtgttctgagatacaactacacaagcgaacaaaacgaaacttgacacgctcgtttcaaaagcctttgtctgatgttctacaatcggtccaaaaggcaagtatgcgtgccaaataacacaaagaaaaccacgcgaaatggcgcatatatagtttgcctactgccgtgagcacatatatggctacaatttacagactccaaattataaagaaacatcattattgtattatgttatttacatgttactcttaatcatacacgattgctgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0527400, RefSeq:Os04g0527400