Os04g0540400

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Revision as of 11:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0540400| Description = Conserved hypothetical protein| Version = NM_001187099.1 GI:297723328 GeneID:9269566| Length = 4995 bp| Definition ...")
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Gene Name

Os04g0540400

Description

Conserved hypothetical protein

Version

NM_001187099.1 GI:297723328 GeneID:9269566

Length

4995 bp

Definition

Oryza sativa Japonica Group Os04g0540400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27433988..27438982

Sequence Coding Region

27433988..27434084,27436330..27436401,27436954..27437028,27437192..27437302,27437730..27437834
,27438118..27438170,27438670..27438795,27438863..27438982

Expression

GEO Profiles:Os04g0540400

Genome Context

<gbrowseImage1> name=NC_008397:27433988..27438982 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27433988..27438982 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacagctacgagaaagagaaaaagaaaaagaagcagattctaaccaagaacatggaggtcaagaagatcaaatcaacaacaaataatctcccaggggctgatagaacaaagtctcaagtaacaggaaatacaactgaagaattaagaagaaagaagacagttgaaggaacaatctcagctgtagaatcaactaaggacatcaagttggacaccaagaaaaaagaaccactacagatgaaaagtcatgaagaagtacaagatgaaaaaagaagaagccaagaatcagataagagcaatattatggcaaaacatattaaagaaaccaaaagtcagaccactgaagttgttccaggggctgatagaacaaaggctgaagtaacaaggaattcacaatcagagagatgtggaagtgacagaattgactctgaagaattaagaagaaacaatacagttgaaggatgtcatagattgcaggctcaagttacagggaatacacaatcaaagacatgtgatctcattacctccaggattttggaaaaaggcaaaaaatcagcaacaattggatcagagattggcaaaaataaagcacaaatactttatgatcaatacacatttcttaacgaaaatgaaagactggtgaaggggggacaaatgagctatactaacctcatgcaacacataattctaagtccacgtgtcagcttgcaagcaaatgaagtatcggaggtgtacaacttgggaattttcaaaaagtaa</cdnaseq>

Protein Sequence

<aaseq>MDSYEKEKKKKKQILTKNMEVKKIKSTTNNLPGADRTKSQVTGN TTEELRRKKTVEGTISAVESTKDIKLDTKKKEPLQMKSHEEVQDEKRRSQESDKSNIM AKHIKETKSQTTEVVPGADRTKAEVTRNSQSERCGSDRIDSEELRRNNTVEGCHRLQA QVTGNTQSKTCDLITSRILEKGKKSATIGSEIGKNKAQILYDQYTFLNENERLVKGGQ MSYTNLMQHIILSPRVSLQANEVSEVYNLGIFKK</aaseq>

Gene Sequence

<dnaseqindica>1..97#2343..2414#2967..3041#3205..3315#3743..3847#4131..4183#4683..4808#4876..4995#atggacagctacgagaaagagaaaaagaaaaagaagcagattctaaccaagaacatggaggtcaagaagatcaaatcaacaacaaataatctcccaggtaagttccactttacctttttgttgttgatttcaccggatatgccatacagtatcaaaatcaaacaaaaacaactcagatttgaaaactcttagggaaattgcatgaaattttggattcctttacatcaagcagtactgagtagggaaacatgacttttgattcaaaaagatccttctaataagctataagtttcatattgaaataaggggaaacatagggcaccagaagaacatacatcatacagtgcacatatctctaacttttgcatcccaaaacatattctgttgatcacaactagtatgtccttcaatgaacatgatccctgtaccgccaaaatgaggagcaaaaagaacaaattttactacacttccagcaacaaaagaacccaagatttatgaatgctcagaggataagaataatttctctgctaacaaaacttaccttcacccacgttgacatcaatttcctgtacaacagttcaaaaaaaacaaatgattgatttcctagatagcaagcacagcagaagacaattcaaaaaaggaacacaaaacaaaatataaggaacaaatatttcatttactgaccattgctgtcatcccacaatccaagcagctccaaggcccttgctcccagaatcaacacatgcaagagcaacaaaagccaaaacaaagttgctaaaaagtacacatataacccagtcaatatcacacagagaacaatagaccaaaaaaatgaaaatgtcatgtggacacatctaaaaattatagataagaatatcttgcacatctgaaattagagacaaaaattcctcaacagttgctatctcagataacttgtgagataacgggcaccacactaaacctaaaaattccatgctaagcaatggaagtaaactagagacagtatgtcaagcttctatcaaggaagaagcctcaggtcaatctatattctaccaagagaaatagagataacagaaaaaaaaacagtacaaaactaggcctacattactaactagcaaaaaaaaaatatatcaggcacatatctaagaaaataaagatgcctagggttccccaaactacaagtctctgataaaaccaatatcaataattaacaatctaactaccaatagtcagttacagtgcgaaataataaaaattacaactgtaactaaggtatatttccactgtaagtggtgtgagttgcactgtaagtgtgttttaggactgcatgaaacctaaaatattgacttcatctgttaaatcaaagattcaaaactgaaaatacaatttgaaaactaaactaaatccccagatgaaagaagtgggcatcaaataccataactaaatcaaaaaagatacaaggtttaagatcagccattcaaatgcctcaagagatatattttttgtgggtaatttcctaatagaaaacatatattgaagctgacatccacataaatgcaaccaataaaaaaacatggagctatacatccataaatttttctgcaagaaaaagtttgacgatcatagaatttacctggctagttctccttttctgttttaatgaaaggaataagtagacacataagagttatgtcccgggcagcacttgttaagcaaaaacaaagcagaatctatgcaagacaaagaaagaaagttaatgttggttgcatacattaacagacaacataaatgaagcggcctcacacttgcaatggcacaagaaggcaagctaatttcagtaaaaacatctaattaattcaaaaatggatgataaccctacactgcattgactggaaaaaaaatctacaacataaggggaagcaatacaaactcactattgtttttatgaaactaaaagtacacatattctaacttatgcatgcacaactgacaaaaaagagtccctagggttcccaaactacaagtgtcctagttttcacacaaatcagtaatatacccaaggtcaatcaattacaaaatctaactaccaacagtcagttacagtgagagataacagaaattacaactgtaacttaggtatatttccactgtaactggactgtaaatggtgacgagttgtactgtaagtatgttttaagttagaattactgtaatttcagactgcatgaaatccaaaaatatttaagttaggtagtcagattacctagaacatataaaactaacatgctttttaaatatttctattacatgcaccaaccatacttgatttaaattacatgcaggggctgatagaacaaagtctcaagtaacaggaaatacaactgaagaattaagaagaaagaagacagttgaaggttagaaaatcatgcttacctattattgtgcatcatatctgatcttcatagaaaatttcatctagcacaaatttatgtatgtaaaaaattagtcatgaagcatgacaaaaattacagtgataattaaccaaaaaattagaactgtatattcagttacagtgagaaataacaaaaattacaactgtaactgcagtgcatatggactgtaactggactatgactggaatcatgcataactttgtccaaaaatccaatactcatgcaacaacatcaacattattccctactataacatgatctaaatcatattataaattacctaaatgatggcctatcttcaaccagaaaatcatgtctactatcaatgaaattgagaactgaaatactatttcaaaacttaacaaaattacataagattagaacagtcagttataattgcaaatgtaactgaggtatagttccactgtaacttcactgagttgtactgtaattatgttttaagttagaattattgtaattacattttgtaatgcttttatttacattttgcaggaacaatctcagctgtagaatcaactaaggacatcaagttggacaccaagaaaaaagaaccactacagatgaaaagtacataaacaactataaatagatactatattgttcccaattaactcaaaatagaaatcaaactattttgacctattgaacaaattatattaatgaacctttcatacttaccaaacataacactgtagtttctcatgaaaacttcaattttctccagttgcaggtcatgaagaagtacaagatgaaaaaagaagaagccaagaatcagataagagcaatattatggcaaaacatattaaagaaaccaaaagtcagaccactgaagttgttccaggtcagaatggcattgttattactatattcatgcaaatctttcaagatactattgaaacattgtaattatagtggactagcattctaaactttgtatacaactaaagttgaactataacagacctaattttgactacatctgagtgataaaaactgcaaagaatctaatgacataattacaaaattatgtcactaaactatatgcagattttcctattcaaacgaaatcaaaattaagtacttatataaacacaaaacatgcacaaacacatacttgtattgaatttctatttcagtactaatgcaagaacatcagtattagttcctattgtagcttctatcagaaattcagtactcatgcaataatatcagcattacttcgtattgtaacatgttctaaaaatattaatataacctaacacatgcaggggctgatagaacaaaggctgaagtaacaaggaattcacaatcagagagatgtggaagtgacagaattgactctgaagaattaagaagaaacaatacagttgaaggttagaaaaaacatgcttacctattattatgcaccatatctgatctttgttgaaaatttcatctagtacaaattatataaggcaaaaattagaggtgaagcatgataaataaaaataatctaactaccttaattcagttacagttagaaataacaaaagttacagctgtaactacagtgcatatggactgtaactggaatcatgcttaactttctcctaaaattcaatagcatcagcattattccatattgtaacatgttataaaatgacccaaaacatgcaggatgtcatagattgcaggctcaagttacagggaatacacaatcaaagacatgtgtaagtgacataatcgactccaaagaattaagaagcaagaagacaattcaaggtcagaaaatcatgcttacctgtcattggcaccatatatgatatttgtagaaattttcatctagcacaaatttatatacattaaaaattagaggtgaagcatgataaataaaaataatctaactacctgcattcagttacagtgagaaataataaaagttacaactgtaactacagtgtatatggactgtaactggactataaggggaatacattaagcaaaatcaacatcatatgaagaattagaggctaaggataatgcagtagtatgtgaaagcaaaactaatagagtgggacttattcagattcaaaaatataaatcaagcagtatttagcctcaaaaatggtgtcaaaacaataaaaaaagcctttcattttgtcaacatcatatgatttttttttgcaaaactcaaattttgactaatgatgctttcattttcagttctaggatctcattacctccaggattttggaaaaaggcaaaaaatcagcaacaattggatcagagattggcaaaaataaagcacaaatactttatgatcaatacacatttcttaacgaaaatgaaagactggtaagtacaatcatgttttccaaaaatgaagaatatatttatttctttgtcgaataaatgtaaacaggtgaaggggggacaaatgagctatactaacctcatgcaacacataattctaagtccacgtgtcagcttgcaagcaaatgaagtatcggaggtgtacaacttgggaattttcaaaaagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0540400, RefSeq:Os04g0540400