Os04g0541500

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Revision as of 11:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0541500| Description = Diacylglycerol kinase, catalytic region domain containing protein| Version = NM_001059980.1 GI:115459689 GeneID:43365...")
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Gene Name

Os04g0541500

Description

Diacylglycerol kinase, catalytic region domain containing protein

Version

NM_001059980.1 GI:115459689 GeneID:4336541

Length

7258 bp

Definition

Oryza sativa Japonica Group Os04g0541500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27509752..27517009

Sequence Coding Region

27511689..27512096,27512194..27512550,27513663..27513756,27513852..27513889,27513974..27514120
,27514288..27514387,27515122..27516074,27516633..27516782

Expression

GEO Profiles:Os04g0541500

Genome Context

<gbrowseImage1> name=NC_008397:27509752..27517009 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27509752..27517009 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagtagctgatctagaaaatcctacttccagaagctcatcccagaagtccagtcggcggtctggtagtcggcgttctcaaaagtcagccgggcaacaatcttcaccaactgtatttccagagaaaaaaggcaaatcaaaatcttcgaggcagaaacacttggtttttgacaataaagattccaagaaagcaaaaaataatgagcaaaaaaatgatgtggtggatgagaagtctaatttctcaggttatgaaatctattctggaaaactcttttttgacaagaaaaatagaattacaggagatcaaatttcagcaaatgggaaagctgatataagtgatgtaagactcacaagtaaagccctaatatggggttcttctttactcagtcttgaggatgtcatctctgtatcttacagttctggtgtccaacatttcattgtgcatgcatacccttctaagaagtatttgtttggaaagacacacagagtacggaaggacctccggtttatagcccctactgtagaggaggccatttcatgggtaacatgctttgccgaacaaaacatatatgttaacatgctacctctccctccaacatccagtaccgagcaagaccttgatggtcccctcagtggtgctttatttgaccacccacccatcaaatgtagaactccaccgaggatacttgttatactgaaccctcggtctgggcatggtagatcatgcaaagttttccatgacaaagcagaacctatttttaagcttgcaggttttcacatggaagtggttaaaactactcatgctggtcacgctaaatctcttgcatctacatttgattttagcgcattccctgatggaatcgtgtgtgtaggtggtgatggaattgtaaatgaggtcttcaacggtctactcagtagaagtgatagagcagaggctgtatcaattccagttggaataatcccagcaggatctgacaattcacttgtttggactgttttgggagttaaagatccaatttcagcatcattactaattgtgaagggtggctttactgccctagacatcctgtctgttgagtggatccagtctgggctaatacactttgggacaactgtttcatactatggttttatcagtgatgtcctggagctttctgagaaatatcaaaagaaatttggccctcttcgatattttgtggctggaatactcaaatttttttgcctgccaagctatttctatgagttagagtatcttccttcttcaaaggagatgactggccatggaaaaggtataggacaagaaaactttgtgtctgatgtatataccaatgtaatgcgcagccgatcaaaaagagaaggaattccacgagcttccagtttgtcaagtattgactctattatgactccaagtcggatgtcacttggggacgttgatacatcaggtagcacagcagcaagcactgaaccttcagagtatgttcgtggtcttgatccaaaagcaaaacgcctttctttgggcagaagcaacattgtttcagaaccagaggaagttttacaccctcaaccacatcattcatcattctggccaagaaccaggtccaaaacaagaactgagagaaattcagttggtgtcactactaacgatacacgattatcttgggcagccccatcaattcatgacaaggaggacatttcctcaacaatttcagatccaggacctatttgggactctgaaccaaagtgggacaatgggccaaaatgggatacagagctaacctgggagtctgaccaccctattgaactccctggaccaccagaagacaatgaaattggaccatcagtggaacttgtgccaaatttggatgataaatgggtagtcaggaaaggacactttcttggtgttctagtttgcaatcattcatgcaagacagtgcaaagtttgagttcgcaggttattgcaccaaaagccaaccatgatgacaacactttggacttgctcttagttggtggaaagggtagatggaagttgttgaaatttttcatacttctgcaatttggtcgccatctttctttgccttatgtggaatatgtgaaggtaaagtctgtcaagcttaaaccaggtgcaaacacgcacaatgggtgtggaatagacggtgagctttgccgcgtcaagggacatgtactctgctccctgttacaagagcaatgcatgcttattggccggcaaagcagacaatctacttaa</cdnaseq>

Protein Sequence

<aaseq>MEVADLENPTSRSSSQKSSRRSGSRRSQKSAGQQSSPTVFPEKK GKSKSSRQKHLVFDNKDSKKAKNNEQKNDVVDEKSNFSGYEIYSGKLFFDKKNRITGD QISANGKADISDVRLTSKALIWGSSLLSLEDVISVSYSSGVQHFIVHAYPSKKYLFGK THRVRKDLRFIAPTVEEAISWVTCFAEQNIYVNMLPLPPTSSTEQDLDGPLSGALFDH PPIKCRTPPRILVILNPRSGHGRSCKVFHDKAEPIFKLAGFHMEVVKTTHAGHAKSLA STFDFSAFPDGIVCVGGDGIVNEVFNGLLSRSDRAEAVSIPVGIIPAGSDNSLVWTVL GVKDPISASLLIVKGGFTALDILSVEWIQSGLIHFGTTVSYYGFISDVLELSEKYQKK FGPLRYFVAGILKFFCLPSYFYELEYLPSSKEMTGHGKGIGQENFVSDVYTNVMRSRS KREGIPRASSLSSIDSIMTPSRMSLGDVDTSGSTAASTEPSEYVRGLDPKAKRLSLGR SNIVSEPEEVLHPQPHHSSFWPRTRSKTRTERNSVGVTTNDTRLSWAAPSIHDKEDIS STISDPGPIWDSEPKWDNGPKWDTELTWESDHPIELPGPPEDNEIGPSVELVPNLDDK WVVRKGHFLGVLVCNHSCKTVQSLSSQVIAPKANHDDNTLDLLLVGGKGRWKLLKFFI LLQFGRHLSLPYVEYVKVKSVKLKPGANTHNGCGIDGELCRVKGHVLCSLLQEQCMLI GRQSRQST</aaseq>

Gene Sequence

<dnaseqindica>1938..2345#2443..2799#3912..4005#4101..4138#4223..4369#4537..4636#5371..6323#6882..7031#gctccaaacacaggaaaaccagtgcgcggaggggagaagagaaacgagcggagcaaagaaagaacagaggaaacggcggcaccgtccctttctttccactggcttctctcccctcaacaacaacaacaacaacagcgcagccggaacagcgccgcctcgtgtccgccacgccattttttttcttctcctcctcttcctcgtctcctcagctgaaaacgcgcacgccaaaacccatcgaaccaccaccccggccctccctcacccgtcgcccacccaatcaacccctccacggctccaccacaccgccgcgtccgcgtcctcctcctcctaccaccaccaccgcctcgcctcctgccccgccgtcaaccgcgagagctcgcgccgccggccgacgtgagtccggaggcgttcgatctgctgccggcggcggggtggaccgagggccgcgtcctcagctggttccgcctcccgatccgatcgtttccagtgggggggcgccgaattcggtacgtctcgttgggtggcttcgatccgcctgatggtgctccctctcttcgtgaggtttcaatctccgtgttaggtgggcggtggctagctgattggattgctcgtcgtgtttctccctttcgccttcgcaatccgattggtgcgccgggcgtttggcattcgaaattatgctaatcgagatctgtggtgcccgtagttcgtagttgctattcctgcgctaagacttccatattcgtgattgcgtttctccttactgaaccaaacaatttagacttctatactcatctataaacacattttattatttgtatttctggagatctgttgctggtatcacctatatgctcgtctttgcacttctcactgtactgcactagaataactgttttctgtattgtgcaactcatcatttgattgctgacgcttgagagttcagcggtacatgctattttatagtgctcatacagtctacttggtacttgcaattatcggggaactgattgctgttagcgtttatatacctatatgttttcgctgtaggctattaagcattttagaactatgtttgagggctcaaccgattaatttgtgaaatagtttagcctatgttcctgctgtaagtgtccctataagtgtccaggtgtttccctataaaagaagtcaagtgaattgtagcaccatagcctctgtgatgactcatcttaatgccgtcttctagagcatggcagtgaactggagcacttcctccgacccagaatagcatgtccagagtcgtagtactaggatgtgtcacatcttgtactagattaacttattattatggaactgagggagtagtttgatatagcacatcatatcagcttccaacaattgacgattgcagtccttagggtagtggctcaaattcaacacatgaatacaaatgttagtagttgatatgtcccaagtaggcatgcacacagttaaacatggagcaaaagttcttttgttagattcgtcacaaggtttcctcgcacatatttgaacatcaggctcatatgataggaaatcaccatataaatatttaaatattatcagaattttatttgctaaagaaatgcttcaaactttcagtacgacaaacttttgaggacctttttctttagacccaagctgtttaggtgctagccttttgtgactaccttcttagttatctgtggagatgaagctcggatgtactcattttttctgaacggctgcttttggtcaacaaatgatgcacatgtaccagccagatggatcttataggtgttctgttttcctttcggtgcaggctatttttagttgttagcaactttgacatggcattgatgccatgatcatacacctatgaggtcatgccaaattcctgatctatactgatgctctgaagtcctctttaaaagaaagagatggaagtagctgatctagaaaatcctacttccagaagctcatcccagaagtccagtcggcggtctggtagtcggcgttctcaaaagtcagccgggcaacaatcttcaccaactgtatttccagagaaaaaaggcaaatcaaaatcttcgaggcagaaacacttggtttttgacaataaagattccaagaaagcaaaaaataatgagcaaaaaaatgatgtggtggatgagaagtctaatttctcaggttatgaaatctattctggaaaactcttttttgacaagaaaaatagaattacaggagatcaaatttcagcaaatgggaaagctgatataagtgatgtaagactcacaagtaaagccctaatatggggttcttctttactcagtcttgaggatgtcatctctgtaagtttcacagaccaagacactactataattctattgctatttggtccacttgggctgaccatctatctttgatgatttgtttatatgttggcaggtatcttacagttctggtgtccaacatttcattgtgcatgcatacccttctaagaagtatttgtttggaaagacacacagagtacggaaggacctccggtttatagcccctactgtagaggaggccatttcatgggtaacatgctttgccgaacaaaacatatatgttaacatgctacctctccctccaacatccagtaccgagcaagaccttgatggtcccctcagtggtgctttatttgaccacccacccatcaaatgtagaactccaccgaggatacttgttatactgaaccctcggtctgggcatggtagatcatgcaaagttttccatgacaaagcagaacctatttttaaggtaccttctgatactctcataatgcaagcttctacttattgctctgcagtaagcaacatatagcttgactaactgtatatgtctattattcttcttggcaataaactttctttttgaagcttttctttaaaccattcgctgtttagtctcaaggagatgtcatgaggaatagaatagtacctctgttcttttctgtatcgaaattattggttgtttcatgttctatgatgtgtaactttgaattaaactctgtagaacttaatattgttacaacttaatgtttcttatgatgcaaatctactgatgtagttcttttacgggcaatctagatacctccaaacatattgatggttaatgtatagattatttgaccatggagattctttagtgccaactaaagaggaatgtttggtattttttgtatcccagtaatggatttttagttccaacagtgaagaactcatgaagagcatatcacgtttctctttaatggatttttagttccaacctgaagtgttaagtttagaaaatatcaaaataatgatccacggttagatttgcagatgactaatttatgtttgttgtttgccctaccaatctagacatgtgggggacatcatacattccttctattttagtagctctacaaaactcctgggcttccatctgatgctttagcagtaaaggattcaattgtgaatgcagcaacggagttggacataaagctgggtaaaatttattgacaaaaggttaagggagattatttaaccccctttctcctggcagcacaggctgtcaagttgcaaatttacttttcaatttagaccaactaaaattgcacttccttcaccttttaatcgaaagtgtataatcgcagttaacttataggcctccttcgagatgtcctttaaaaaaaagagagaattgtgctgactcgatcacctcctctcctcttagatatttgctaatggattatttttattgcttgtatgcattcacatttctcaacttggtgattttttacccgttaccctgtttttattattcatgcgtgcctacataaactttatatcatttatttcccgctattaattttgtatcatctgatgtagcttgcaggttttcacatggaagtggttaaaactactcatgctggtcacgctaaatctcttgcatctacatttgattttagcgcattccctgatggtataaacagcacagatgttgccaagtagtttatgtaggtcaacacggcaaccatttcaactggttgaattgataatgtattaaatgttttgtaggaatcgtgtgtgtaggtggtgatggaattgtaaatgaggtttgtccttgatgattatatattatagtttaatgggatttagtaaaacttatatatgatagctgaacatttatagttctgcaggtcttcaacggtctactcagtagaagtgatagagcagaggctgtatcaattccagttggaataatcccagcaggatctgacaattcacttgtttggactgttttgggagttaaagatccaatttcagcatcattactaattgtgaaggtatgcctatcgctataagcttacaaagttacaatgtgaatctttcacgacctcttcttacaggaagagaaaatttcaacatcacccttaaggcttttcagttaattttgtccaaaattattagatcacttatagcttttctcataaggtctgttccttgataacagggtggctttactgccctagacatcctgtctgttgagtggatccagtctgggctaatacactttgggacaactgtttcatactatggttttatcagtgatggtaacttcttgtacaagacgtttgctctttaatactccctctgtcccataatataagggattttgggtggatgtgccacatcctagccacaatgaatctggatagtatccagattcattgtgctaggatgtggcacatccacccaaaatcccttatattatggtagttctcatttatactgtatgcactgatatcctaagggctaaggccacaaaagttgcgtacattctaaatccctcagattcatatatcttgcattgccattttttccataaatcttgaaatttggaatgcttcataagttgtattgggacaatggtaaactttttagctgacaaaagtacttttagaatacgatagtttttaaaatacttttggtttaccaaaaattagaccgccttgagtacttatccttatactaaacacttgatctgatgcatgctgagttgctcttcccaacagctttactaggctaatgatctggcatatactttcatcatttcactcaattagcacatacaagttatcttactgtactcttaattgtaaaatttgagataacttgtatgcttcattggtaaatttgctattgtctccgtttcttcaatgactgctcattaaagtgtagtttatttatctatgttccagtatttgcagcagtgcaatgtagtttagcagtacaggattgcataataatttaataagctgaaaaaggcactattactttgctgcagtcctggagctttctgagaaatatcaaaagaaatttggccctcttcgatattttgtggctggaatactcaaatttttttgcctgccaagctatttctatgagttagagtatcttccttcttcaaaggagatgactggccatggaaaaggtataggacaagaaaactttgtgtctgatgtatataccaatgtaatgcgcagccgatcaaaaagagaaggaattccacgagcttccagtttgtcaagtattgactctattatgactccaagtcggatgtcacttggggacgttgatacatcaggtagcacagcagcaagcactgaaccttcagagtatgttcgtggtcttgatccaaaagcaaaacgcctttctttgggcagaagcaacattgtttcagaaccagaggaagttttacaccctcaaccacatcattcatcattctggccaagaaccaggtccaaaacaagaactgagagaaattcagttggtgtcactactaacgatacacgattatcttgggcagccccatcaattcatgacaaggaggacatttcctcaacaatttcagatccaggacctatttgggactctgaaccaaagtgggacaatgggccaaaatgggatacagagctaacctgggagtctgaccaccctattgaactccctggaccaccagaagacaatgaaattggaccatcagtggaacttgtgccaaatttggatgataaatgggtagtcaggaaaggacactttcttggtgttctagtttgcaatcattcatgcaagacagtgcaaagtttgagttcgcaggttattgcaccaaaagccaaccatgatgacaacactttggacttgctcttagttggtggaaagggtagatggaagttgttgaaatttttcatacttctgcaatttggtcgccatctttctttgccttatgtggaatatgtgaaggtaacatgcacaattctttcttttctcaagctattttttcaccctcttgtatttatgcttttcagacaagggatttttcattcgagtaccagtggcaaattttccgaatacctgtttattacttaggtcctctgaaataaataccgtttttacgtttgaaacaaattaacttctctacatagttgaatgcattctgaaaacaaacatattccaatgtgtatattctgtttttttttgttgagaggatattatcatatacgctcatgaatacctgatttcacctttttattatcgtaaaccttttggcttcttaagagcagcagtctgcagtgcattttaacttttgttatgtcaatagaagtatgagctgtttggacctgttgggcggtctgggagtttatgtcagctctggtgatggatcactgaaagttcacctaaattaagacagtggcgaatagttatcaaaacatgctctggggctctgggctaaattattatttgcacttatattttcatctaccaaggataatatctaacttttagctgacgttgacacaggtaaagtctgtcaagcttaaaccaggtgcaaacacgcacaatgggtgtggaatagacggtgagctttgccgcgtcaagggacatgtactctgctccctgttacaagagcaatgcatgcttattggccggcaaagcagacaatctacttaagtgctgtaaaattagttgaatttcgagtttttgaggcactgtattttctgtttccacttcgaacaactgatttttttttcttttgagttgtctatatttcgctacttgctaatggggtgtgtgagtgggttcagaacgtgcagacctcgagaatttggactgaacaaacaatgctgtgatgcttctgtatattcgagtgattataggagaataccttgattcttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0541500, RefSeq:Os04g0541500