Os04g0543000

From RiceWiki
Revision as of 11:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0543000| Description = Similar to Protein kinase| Version = NM_001059987.1 GI:115459703 GeneID:4336548| Length = 2190 bp| Definition = Ory...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0543000

Description

Similar to Protein kinase

Version

NM_001059987.1 GI:115459703 GeneID:4336548

Length

2190 bp

Definition

Oryza sativa Japonica Group Os04g0543000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27593235..27595424

Sequence Coding Region

27593426..27593995,27594098..27594220,27594301..27594560,27594647..27595070

Expression

GEO Profiles:Os04g0543000

Genome Context

<gbrowseImage1> name=NC_008397:27593235..27595424 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27593235..27595424 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctgcatgtgcctcttccaggacaagcgcaggagcaagagacggccggaggtggcggcgccggcgccggcaccggctccgccctccccgagtgccgctgccgccgtttccaccgatgcgtgctcgaacgtgtccgtgccagccgccgcgccgagcacgtgcacgtcgtcgtgggcgagcacgaggccgtcggcgagctcctcggcggtgagcaccccggagccgtacgaggcgaggcagggcgccccccgcgagctcgctctccgcgagctccgcggcgccacgggcgacttcagcccgctgctcatggtcggccggggcggcttcgggtgcgtctaccgcggcgtcctccgcctccccggcgagccgccccacggcacccccgtcgccgtcaagaggctcaaccccgacagccgccaggggcacaaggagtggctcgccgaggtgcagctgctgggcgtcgtggagcaccccaacctcgtcaacctcctcggctactgcgcggcgcagacggagcgaggcccgcagcggctgctggtgtacgagttcgtgccgaataagacgctggacgaccacctgttcgaccgatcccaccccgtcctcccgtggggcgtcaggctgcagatcgcgctgggcgctgccgaggggttactgtacctccacgagggcctggagtttcagatcatataccgtgatttcaaggctgcaaatgtgctgctggatgatgagttcagacccaaactgtcagatttcggattagcaagggaagggccatcagaaggtcagacacatgtctccacagcggtgatggggacgtacggctacgcggcaccggactacgtccggacggggcacctcacgaccaagagcgacgtgtggagcttcggcgttgtgctgtacgagatcctcgccggccggcggtcgatcgacaagagtcggcccaaggacgagcagaagctcctcgagtgggtgcggcggcaccccgccgggagcccgcggttcggccggatcatggacgggaggctgcaggggaggtactccgtgagagcggccagggaggtcgccgagctcgccgccggctgcctcgcgaagcacggcaaggaccgccccgcgatggcggaggtggtcgagcggctgaggcgggcgacgcggcacgccgagctggacggcgaagtgtatgatgatgccggggaggagagctcgagctcgccggcggcggcggccgtggaggacgacgtggccgtggccgcggcggcggcgaggcggcggatgctccaccttgctgcgctcggggagaacgcgagcgcgagcgctcacgcgaggagaaggctcatgctcatgagggcggctgctgctgccactgccgcgacgtga</cdnaseq>

Protein Sequence

<aaseq>MGCMCLFQDKRRSKRRPEVAAPAPAPAPPSPSAAAAVSTDACSN VSVPAAAPSTCTSSWASTRPSASSSAVSTPEPYEARQGAPRELALRELRGATGDFSPL LMVGRGGFGCVYRGVLRLPGEPPHGTPVAVKRLNPDSRQGHKEWLAEVQLLGVVEHPN LVNLLGYCAAQTERGPQRLLVYEFVPNKTLDDHLFDRSHPVLPWGVRLQIALGAAEGL LYLHEGLEFQIIYRDFKAANVLLDDEFRPKLSDFGLAREGPSEGQTHVSTAVMGTYGY AAPDYVRTGHLTTKSDVWSFGVVLYEILAGRRSIDKSRPKDEQKLLEWVRRHPAGSPR FGRIMDGRLQGRYSVRAAREVAELAAGCLAKHGKDRPAMAEVVERLRRATRHAELDGE VYDDAGEESSSSPAAAAVEDDVAVAAAAARRRMLHLAALGENASASAHARRRLMLMRA AAAATAAT</aaseq>

Gene Sequence

<dnaseqindica>1430..1999#1205..1327#865..1124#355..778#aaacgattcggccatttggaggcatgtctcctcttgagcatctgctgccattgagtttcttgtgatcggcagctgtctactgttggatttctcttccatctggcagaaatctggctttgctggatttttcttctctgatcgattggttcttccttccactgtgttctctttgctcttggccttctcctggttggattttaatcacgtagaagtacagacaagtcattgtcgagcaacagaagaaatagaaaatgtctctgttttaatcaccaatgcgtgatctttttctctgcaacctctgagttcttgaagtacctgaaattgtggtagcagccgggcttcttcctccaagaaatgggctgcatgtgcctcttccaggacaagcgcaggagcaagagacggccggaggtggcggcgccggcgccggcaccggctccgccctccccgagtgccgctgccgccgtttccaccgatgcgtgctcgaacgtgtccgtgccagccgccgcgccgagcacgtgcacgtcgtcgtgggcgagcacgaggccgtcggcgagctcctcggcggtgagcaccccggagccgtacgaggcgaggcagggcgccccccgcgagctcgctctccgcgagctccgcggcgccacgggcgacttcagcccgctgctcatggtcggccggggcggcttcgggtgcgtctaccgcggcgtcctccgcctccccggcgagccgccccacggcacccccgtcgccgtcaagaggctcaaccccgacagccgccaggcacgcacacacatgacgacacgctcccggttgatctcgaccgcttccgccatttgtgacgactccattgtatcgtgctcgtgcaggggcacaaggagtggctcgccgaggtgcagctgctgggcgtcgtggagcaccccaacctcgtcaacctcctcggctactgcgcggcgcagacggagcgaggcccgcagcggctgctggtgtacgagttcgtgccgaataagacgctggacgaccacctgttcgaccgatcccaccccgtcctcccgtggggcgtcaggctgcagatcgcgctgggcgctgccgaggggttactgtacctccacgagggcctggagtttcaggtaatccacatcttctccgaaaaactgcgcgtcttcatcagaaaacacaccattttcacctgattttccttgtttgtcagatcatataccgtgatttcaaggctgcaaatgtgctgctggatgatgagttcagacccaaactgtcagatttcggattagcaagggaagggccatcagaaggtcagacacatgtctccacagcggtatgtgcaaacatcacagttcagaaaatgtgtcaactcaacacggatcatatcacttctgaattcttcagaaatgaatccgttttggctttggtggatcaggtgatggggacgtacggctacgcggcaccggactacgtccggacggggcacctcacgaccaagagcgacgtgtggagcttcggcgttgtgctgtacgagatcctcgccggccggcggtcgatcgacaagagtcggcccaaggacgagcagaagctcctcgagtgggtgcggcggcaccccgccgggagcccgcggttcggccggatcatggacgggaggctgcaggggaggtactccgtgagagcggccagggaggtcgccgagctcgccgccggctgcctcgcgaagcacggcaaggaccgccccgcgatggcggaggtggtcgagcggctgaggcgggcgacgcggcacgccgagctggacggcgaagtgtatgatgatgccggggaggagagctcgagctcgccggcggcggcggccgtggaggacgacgtggccgtggccgcggcggcggcgaggcggcggatgctccaccttgctgcgctcggggagaacgcgagcgcgagcgctcacgcgaggagaaggctcatgctcatgagggcggctgctgctgccactgccgcgacgtgacctgttcattctcttgtcggagttgacaatcacaatgcaggattgacttctgaaggattttttttttgtgctgagatgatatttttttgttacgggttttgagaaaaacaaattacaggactttgtgactacaacttgtacagcatggttaatccaaataatacaattttcagtagagacattgtgacaac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0543000, RefSeq:Os04g0543000