Os04g0544100

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Revision as of 11:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0544100| Description = Similar to SET domain-containing protein SET104| Version = NM_001059993.1 GI:115459715 GeneID:4336555| Length = 2711...")
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Gene Name

Os04g0544100

Description

Similar to SET domain-containing protein SET104

Version

NM_001059993.1 GI:115459715 GeneID:4336555

Length

2711 bp

Definition

Oryza sativa Japonica Group Os04g0544100, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27642629..27645339

Sequence Coding Region

27642683..27645208

Expression

GEO Profiles:Os04g0544100

Genome Context

<gbrowseImage1> name=NC_008397:27642629..27645339 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27642629..27645339 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggatcccggaggtggtggtgccgccgagggcggccggcccgcggaggtacaaggggctcgtgccgtggcgcttccagccgggcttcgtcaggccgcctccggtcaagccccctgccgccgccgccgccgttgccggaggaggggtcgcgggcacgcccggcggcaagggtcgcgggttgggggcgtcgggggaaggcgtcgggtccagtggaggccggggagatcctcaatcgaggagatgcacccgcagcgcgagcgcgaagggctctggtgatgcgcggagcgtggaggagggcggtccccgtgttgccggagacgacggcggttcgggcaaatccggcgtcgcggcggagggctccggatttgagggtttgaggaatggcaggggcggtggcgttggaacggcagctgccgaagattgtggtttggagaagtccaaccccgatggcatcgtcggagatgctgatgtgcatcttgagagcggcagcgatgcaagagatggggaatgcgtttctgagggtttgaagaagccttgtgtaaataatagcaatggttcttctgccgcggattgcgcgccgaaggtgaaaaagggaaatgacagtggcaatggaggtgccgatgagtgtaatgctgcagccaaaagtagcaacttagcatgtcctggcaacaatggcgacgaaacgaatcgtaaggggcggaaggtagtacttccatggaggttccaggttgggttcaagcggtcgttctcgaaagctttctgctccgatagtgaatcttcagggccctctggtactcaattctacagagcccaagactcttcgacaccgtgcactccagcaacaagaagttctgtccggtgttatgcgagtgctcattctggtgttagagtctcggccatgcgtgatttctcagtgaaaggtgagaaggaaacatcaactccatataagaagagcaaaactggcatggatggtcctagtcaagggatgccaaagaatggagttgtcctcgctagggaaaacattatgggatctctgcagaattttcgcttaatttacagggaccttttggatgaagaagaagagaagtcgacagaagcagtgattagacctgatctacaagcttacagaattttcagggagcggttcatcacagactgcgatgagaagaaatatattggcaatgtgcctggaatcaaagttggtgatatcttccacttgagggtagagctttgtgttgttggtcttcatcgcccacaccgggtgggtgtagatcatatcaaacaggaggatgggacttgcatagctgttagcattgtatcatatgcacaatcttccgatattaagaataatttggatgtcttggtgtattctggagcaatgacagctatagccaatcagaagatagagggtaccaacttagcactcaagaagagtatggacactaacacaccagtccgtgttatccatggtttcgtcactcacctcaatggaaactgccagcgaaagaagatccctacttatatatatgggggtttatatatagtcgagaaatactggagggagaaagagggtaatgatcgttatgtttatatgttccgactgagaagaatggcaggtcagaaacacattgacatccaagacattctgaattcaggacaagctgaatcatatggtggtattatcataaaagatatatcccgaggattggagaagatccctgtatctgttgttaattcaatatctgatgagtacccaatgccctatcgctacattgcacacctgcagtacccccgtaactaccagccagcacctccagcaggctgtggttgtgttggtggatgctcagattctaaaaggtgtgcatgtgcagtgaaaaatggtggggagattcctttcaatgataaaggccgcatcttagaagcaaaacctcttgtttatgagtgtggaccttcatgcaagtgccctcctacatgtcataacagagttggtcaacatggccttaggtttcgtttgcaagtcttcaaaaccaaattgatgggctggggagtaagaactcttgacttcataccatctggaagctttgtatgtgaatacattggagaagtgttggaggatgaagaggcacagaaaaggtcgaccgatgaatacttattcgctattggtcataattattatgatgaagccctttgggagggcctatcaagatccataccctcacttcagaagggtcctgataaagatgaggaagctggctttgctgttgatgcttcaaagatgggcaactttgcaaaattcatcaaccatagttgcacccctaacctttatgcacaaaatgtcctatatgatcatgacgacaagagtgtacctcacattatgttctttgcctgtgaggacattccaccccgccaagaactttcataccactacaactatacaatagatcaggttcatgatgccaatggtaacatcaagaagaaaaaatgtctctgtggctctatagagtgtgatggttggttgtattag</cdnaseq>

Protein Sequence

<aaseq>MGIPEVVVPPRAAGPRRYKGLVPWRFQPGFVRPPPVKPPAAAAA VAGGGVAGTPGGKGRGLGASGEGVGSSGGRGDPQSRRCTRSASAKGSGDARSVEEGGP RVAGDDGGSGKSGVAAEGSGFEGLRNGRGGGVGTAAAEDCGLEKSNPDGIVGDADVHL ESGSDARDGECVSEGLKKPCVNNSNGSSAADCAPKVKKGNDSGNGGADECNAAAKSSN LACPGNNGDETNRKGRKVVLPWRFQVGFKRSFSKAFCSDSESSGPSGTQFYRAQDSST PCTPATRSSVRCYASAHSGVRVSAMRDFSVKGEKETSTPYKKSKTGMDGPSQGMPKNG VVLARENIMGSLQNFRLIYRDLLDEEEEKSTEAVIRPDLQAYRIFRERFITDCDEKKY IGNVPGIKVGDIFHLRVELCVVGLHRPHRVGVDHIKQEDGTCIAVSIVSYAQSSDIKN NLDVLVYSGAMTAIANQKIEGTNLALKKSMDTNTPVRVIHGFVTHLNGNCQRKKIPTY IYGGLYIVEKYWREKEGNDRYVYMFRLRRMAGQKHIDIQDILNSGQAESYGGIIIKDI SRGLEKIPVSVVNSISDEYPMPYRYIAHLQYPRNYQPAPPAGCGCVGGCSDSKRCACA VKNGGEIPFNDKGRILEAKPLVYECGPSCKCPPTCHNRVGQHGLRFRLQVFKTKLMGW GVRTLDFIPSGSFVCEYIGEVLEDEEAQKRSTDEYLFAIGHNYYDEALWEGLSRSIPS LQKGPDKDEEAGFAVDASKMGNFAKFINHSCTPNLYAQNVLYDHDDKSVPHIMFFACE DIPPRQELSYHYNYTIDQVHDANGNIKKKKCLCGSIECDGWLY</aaseq>

Gene Sequence

<dnaseqindica>132..2657#aggagaacccccaccccacccacctcgccccactccgccgcgccccctccccgctgcctccgtggagcgtcatctccgcgtgcagggttagaggcttctggtggtggtgggggcagtgcggggggcgttggatggggatcccggaggtggtggtgccgccgagggcggccggcccgcggaggtacaaggggctcgtgccgtggcgcttccagccgggcttcgtcaggccgcctccggtcaagccccctgccgccgccgccgccgttgccggaggaggggtcgcgggcacgcccggcggcaagggtcgcgggttgggggcgtcgggggaaggcgtcgggtccagtggaggccggggagatcctcaatcgaggagatgcacccgcagcgcgagcgcgaagggctctggtgatgcgcggagcgtggaggagggcggtccccgtgttgccggagacgacggcggttcgggcaaatccggcgtcgcggcggagggctccggatttgagggtttgaggaatggcaggggcggtggcgttggaacggcagctgccgaagattgtggtttggagaagtccaaccccgatggcatcgtcggagatgctgatgtgcatcttgagagcggcagcgatgcaagagatggggaatgcgtttctgagggtttgaagaagccttgtgtaaataatagcaatggttcttctgccgcggattgcgcgccgaaggtgaaaaagggaaatgacagtggcaatggaggtgccgatgagtgtaatgctgcagccaaaagtagcaacttagcatgtcctggcaacaatggcgacgaaacgaatcgtaaggggcggaaggtagtacttccatggaggttccaggttgggttcaagcggtcgttctcgaaagctttctgctccgatagtgaatcttcagggccctctggtactcaattctacagagcccaagactcttcgacaccgtgcactccagcaacaagaagttctgtccggtgttatgcgagtgctcattctggtgttagagtctcggccatgcgtgatttctcagtgaaaggtgagaaggaaacatcaactccatataagaagagcaaaactggcatggatggtcctagtcaagggatgccaaagaatggagttgtcctcgctagggaaaacattatgggatctctgcagaattttcgcttaatttacagggaccttttggatgaagaagaagagaagtcgacagaagcagtgattagacctgatctacaagcttacagaattttcagggagcggttcatcacagactgcgatgagaagaaatatattggcaatgtgcctggaatcaaagttggtgatatcttccacttgagggtagagctttgtgttgttggtcttcatcgcccacaccgggtgggtgtagatcatatcaaacaggaggatgggacttgcatagctgttagcattgtatcatatgcacaatcttccgatattaagaataatttggatgtcttggtgtattctggagcaatgacagctatagccaatcagaagatagagggtaccaacttagcactcaagaagagtatggacactaacacaccagtccgtgttatccatggtttcgtcactcacctcaatggaaactgccagcgaaagaagatccctacttatatatatgggggtttatatatagtcgagaaatactggagggagaaagagggtaatgatcgttatgtttatatgttccgactgagaagaatggcaggtcagaaacacattgacatccaagacattctgaattcaggacaagctgaatcatatggtggtattatcataaaagatatatcccgaggattggagaagatccctgtatctgttgttaattcaatatctgatgagtacccaatgccctatcgctacattgcacacctgcagtacccccgtaactaccagccagcacctccagcaggctgtggttgtgttggtggatgctcagattctaaaaggtgtgcatgtgcagtgaaaaatggtggggagattcctttcaatgataaaggccgcatcttagaagcaaaacctcttgtttatgagtgtggaccttcatgcaagtgccctcctacatgtcataacagagttggtcaacatggccttaggtttcgtttgcaagtcttcaaaaccaaattgatgggctggggagtaagaactcttgacttcataccatctggaagctttgtatgtgaatacattggagaagtgttggaggatgaagaggcacagaaaaggtcgaccgatgaatacttattcgctattggtcataattattatgatgaagccctttgggagggcctatcaagatccataccctcacttcagaagggtcctgataaagatgaggaagctggctttgctgttgatgcttcaaagatgggcaactttgcaaaattcatcaaccatagttgcacccctaacctttatgcacaaaatgtcctatatgatcatgacgacaagagtgtacctcacattatgttctttgcctgtgaggacattccaccccgccaagaactttcataccactacaactatacaatagatcaggttcatgatgccaatggtaacatcaagaagaaaaaatgtctctgtggctctatagagtgtgatggttggttgtattaggcttgagagtgtactatttccagaggcataattgaacttctttcattgggcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0544100, RefSeq:Os04g0544100

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os04g0544100&oldid=16721"