Os04g0544900

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Revision as of 11:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0544900| Description = Alg9-like mannosyltransferase family protein| Version = NM_001059998.1 GI:115459725 GeneID:4336560| Length = 7405 bp...")
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Gene Name

Os04g0544900

Description

Alg9-like mannosyltransferase family protein

Version

NM_001059998.1 GI:115459725 GeneID:4336560

Length

7405 bp

Definition

Oryza sativa Japonica Group Os04g0544900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27673878..27681282

Sequence Coding Region

27674260..27674340,27674507..27674600,27675042..27675107,27675188..27675278,27675498..27675580
,27675685..27675753,27676091..27676158,27676238..27676324,27676672..27676743
,27677293..27677396,27677495..27677558,27678118..27678189,27678589..27678647
,27678783..27678900,27679531..27679586,27679674..27679760,27680012..27680057
,27680131..27680172,27680957..27681042,27681159..27681207

Expression

GEO Profiles:Os04g0544900

Genome Context

<gbrowseImage1> name=NC_008397:27673878..27681282 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27673878..27681282 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgccgcggccctcgccggcggcgaggctgctgagggagtacgggtgggacctgttgctcggatcgattgccgcgttctacgccgtcatggtgccctacaccaaggtggaagagagcttcaacgtgcaggccatgcatgacattctctaccacaactatcatattgagaagtatgatcatttagaatttcctggtgttgtccctcggtcatttataggagcattggttgtatctgttatctcatcgcctgcagtcttcgtaatgcatttatgtcatgttccaaaggtttatggtcttctagcagttcggatagtgttgggtagtattatcctgatgactttgagacttctccgagttcaggtaaaaaggaagtttggtcatcatgctgaagcattctatctgatactaactgctacccagtttcacttattgttctactcaaccaggccccttccgaatgtcttagctttagcttttgttaacttgacatactatttctggttcaagggaaaccatcgacgcacattacaggccctgattgtcgcagcagttatttttaggtgtgacatgattttgcttcttggtacaataggacttgcacttttgctgagcaggtctatttctctattggaagcaatcaaatgttgtgtaagcactgccattatatgcattggcttcactgtactggttgactctatactgtggcggcgaatcctgtggccagaatttgaggttttgtggtttaattcagttctgaaccggagttcagagtggggtacacattccatccattggtacttcacctcagcacttccacgctccatgctggtagcatatcctctttgcatggtcggtgctcttcttgacagaaggatagtgccatacatacttccagtcttctcatttgttgtgctttattcaaagcttccacataaggagcttcgcttcattatggcttcgattcccatgcttaatgtgtctgcttcactagcagcaagcagaatatataataacagaaagaaaactgggtggaagttactttatgttctcatgattggtggctttctttccagtctaggatactctggtgtaactttcatggcatcctacaataattatcctggtggatatgctctaaaggctctacatgaagcagattctgtaatgaaggacaaaattgttcacattgatgccttcactgcaatgagtggagtttcacgtttctgtgaaagtgaatatccttggagatattctaaggaggaaaaaatttccatcgaggaatatcaggaaagaaatttcacatatctgctgaatgaacaccgccatatcagtggctacaagtgcttgtttgccgtggatggattctccagagcgaaaattcaacctcgaatcccactactctcactggtgaaagagccaaaagtgtttgcacatgggaatacgagagaccctgatattctttcgctgaattggcccggttgcccttga</cdnaseq>

Protein Sequence

<aaseq>MAPPRPSPAARLLREYGWDLLLGSIAAFYAVMVPYTKVEESFNV QAMHDILYHNYHIEKYDHLEFPGVVPRSFIGALVVSVISSPAVFVMHLCHVPKVYGLL AVRIVLGSIILMTLRLLRVQVKRKFGHHAEAFYLILTATQFHLLFYSTRPLPNVLALA FVNLTYYFWFKGNHRRTLQALIVAAVIFRCDMILLLGTIGLALLLSRSISLLEAIKCC VSTAIICIGFTVLVDSILWRRILWPEFEVLWFNSVLNRSSEWGTHSIHWYFTSALPRS MLVAYPLCMVGALLDRRIVPYILPVFSFVVLYSKLPHKELRFIMASIPMLNVSASLAA SRIYNNRKKTGWKLLYVLMIGGFLSSLGYSGVTFMASYNNYPGGYALKALHEADSVMK DKIVHIDAFTAMSGVSRFCESEYPWRYSKEEKISIEEYQERNFTYLLNEHRHISGYKC LFAVDGFSRAKIQPRIPLLSLVKEPKVFAHGNTRDPDILSLNWPGCP</aaseq>

Gene Sequence

<dnaseqindica>6943..7023#6683..6776#6176..6241#6005..6095#5703..5785#5530..5598#5125..5192#4959..5045#4540..4611#3887..3990#3725..3788#3094..3165#2636..2694#2383..2500#1697..1752#1523..1609#1226..1271#1111..1152#241..326#76..124#aagccgcggaattccggaagcgactcgctctcgtcggctcgtcgcacgcgcgagcccactttgccggccaccgggatggcgccgccgcggccctcgccggcggcgaggctgctgagggagtacggtgagtgctctcctctcgctctcggcctcgcgaagcctctccaaatcagggctctgctgcggtggtgggagggtttttgggatctgatgcgtcgggggcactactctcgcttgcagggtgggacctgttgctcggatcgattgccgcgttctacgccgtcatggtgccctacaccaaggtggaagagagcttcaacgtgcaggttccggttccggctccctctccgttgagcatccgagtggctggattacattgtagtcgtgctttgtgtgcaattacagtagggattttctgttgtttgctcaagtagtagtgtgtgtccttattctctgttgctgttcagttactagacacgggattcaggatgattgctgataatttgctaatgttcattttggttgcaactggttgctagatgatattggtgtgcacatgtgaattgtaggatagtatgacttaacaacaatcagcttatgtgaattcatttacattttctgcagacacgcagaatccatgctgaatattgatgaatcgggtatctttgccgtagacatccaagatgcaccctttctatatttggtagttcatacatcatatatattatatcatgagcgttgaaaagctgaagttgctcaagttccagtgtcacctatgcaatgttaaagaagtagaggaaaatttgcaggataattatgagtttcaactttcaacccttcatgtctaaaaactaatgctttatgtttgataacttcccttaggctctgcgtgataatcaatttgaatgaaatttgctttgggaaattgtttcattctctactgctcatttatctttcctttgcctggtattgaatcttttacttgctaattcttgcctttttccgtttagtttggtaaattttttttacctattccacagtgtatgtttgcacttttactgtaatgccattacaatgtttaggctaacactttgctcatgtatgttctaggccatgcatgacattctctaccacaactatcatattgagaaggtaatcatttctgctagtctatcaatacaacatgcttgatgcttatttaatttctttcttcaatttgctgcagtatgatcatttagaatttcctggtgttgtccctcggtcatttataggtaatactatgttcacttgaagccttgatctgtgcactatgctacaatttttccgctaatgaccattgcttggctcaagcataatgaaatggcaagtagatggtcaaggtcagatggcattaccagtttaccacaatatactcctactagatatgcctgtagtgtctatatatggtatgactggccttgcagattttgtaatctggacatgacgcagatcattaacaccgtttactacatatattcttcaggagcattggttgtatctgttatctcatcgcctgcagtcttcgtaatgcatttatgtcatgttccaaaggtttatggtcttctagcaggtgctgtcaataacttagcacatgtcttcttgcatgttgtatctgtttttgttgccatattgatgttcttctattttgcccttttagttcggatagtgttgggtagtattatcctgatgactttgagacttctccgagttcaggtattccttttcacttcttgttctgtttaaaagggtttattgcaagtatgcactgtttctcagttctcctaggtactaccaatattctgaaaacgctgtttccctgaaaaggggtaaacctcaatccttttacctgtataaccttctcctggccttgaagtgcagcaactcatagaatggccaccattttttttaaaaaaaaggaaccttgcttatcaaatttggtttttgttttgatgcgtctgtgaatttgccaagggcctaagatgcatggtcgtcttgcctgtggcatacctgctgcagtatgctagccttgtttgaatcttctttttttggcttggtttggaccatataccttacgatacctttcactctgtgccatttatattccatacaaatctggatagaagagaacttaatttttgtttctactatctcatgcacaaacttctaagtgctgtatatcatcaagatatccctttgggttatgtgtttatgtcaaactgttctatgcccatcttgagtaacatttgttttctataatttgcactgaatcgtcccgtgagcacgagtctgttattctgtccttggacaccataacgtttttctcagttcatttctgatatacaggtaaaaaggaagtttggtcatcatgctgaagcattctatctgatactaactgctacccagtttcacttattgttctactcaaccaggccccttccgaatgtcttagctttagcttttggtgaggacattgtttaaatcaaacacaagtctgttcgagtgttactgatttttgtgacactattggcagtagcattaatcatatgtggggtttgtgtaataatcgtgcaactcattgtttctttctgtctcgcagttaacttgacatactatttctggttcaagggaaaccatcgacgcacattacaggccctggtatgctaattttttaacacttttaccttactttcacaccattttgtttgcatgctgctgttttcacatttttgtatacactgcagaaagcaagaatttatttcaattcgagttgcatatattgttgaattcaaaatttgacatcctgcactgcacacaataactccaaagaatctgagttctggacatgacattctaaagttgcaagtttcaacatgaaactgagaaattctttctttactcttcgttcagttcaatttcttgttgatttactaaattgagaaatgattctcagttatttatttgcagaccaataaagattacaaattggttttatagcattgaaagatcctcagttccgctttatccttctgaagtaattctccatattgcttgcagattgtcgcagcagttatttttaggtgtgacatgattttgcttcttggtacaataggacttgcacttttgctggtgagtttcacctacaaaacctgaatttctcttggcagttgcacagtcatttcatactcttttatgtagtgaaatctttgaggaagcaagggtccaaagtttatattactcattttttgtaggctatgcacaaatagctcttatctcgtacactaggtacaaataccaattgtcaatactctctattacttcccaactttgtgtttgttcaaattcaatgcaaagtaactttgtcatagaatcataagggcttcatggttcaaccagattttgcggttttgtgctttcatcatttgtgtctctgtagtgaattagtaaacttgtttgaaggaccatgaggggactgtggttaattatctctataagttatttttattgaggcatggctaataatctctaagtgagtaacttggtatgtcaccaggctattaaaatgatagcactcacttatactatcatatatcaagttgttatatctatttggactttgtatgtattcttctgcttactttatctgggaaagttggggctgaggtgcaatttgactatgctgtgacagagcaggtctatttctctattggaagcaatcaaatgttgtgtaagcactgccattatatgcattggtatgttgctttctactttcttgaactttctccaatagtctaacagaagtctgtgcaaatctgcaagaaacatttctcactatgaataatgttcttaggcttcactgtactggttgactctatactgtggcggcgaatcctgtggccagaatttgaggttttgtggtttaattcagttctgaaccggagttcagagtggggtgtatcctttttctatttgtgtgcatgtgccaaactgcagtttccttttttttttaataataattctagttaatactttcagtgcacaatgaaacaccgtttttttcctctttagccagaattttattcttttttcctagcaaatatatgcatgtgttctctctttcactaagtcacttcacggagacattttcatatgcactcctttctctttagccagaattttattcttttttactaccaaatatatatgcatcagttctctctttcactaagtcacttcacagagacatttcatatgagaatatgcaaagcacatatcttttgtattaagattgggaagattgaagtttcattttcatatgcactgaacatgatgttaatctctattagtcacatgaatacaaaaaaggatgcaacatatatacacttcttgttcaagacttatcctcttcttctttttagattcatgtggtgaaatctatgtattatctcctgaaacttatgcgaagctcccagccctgttatccatgactaccataaactttagacacattccatccattggtacttcacctcagcacttccacgctccatgctggtagcatatcctctttgcatggtgagataagaaacttccatacaagaaattgtgctacttacgtggctaaaaagtgcatgtgccttttgcttgaacaagtatataacttattccatgccttcttatcatgtatttaatatgcatgaaacatgatgcttagctagtaatagttgattggcttcccatctctacatgtactttatatcaaaactgttacttcatactatttgattgagtcaactaattatatttttatgatgtatcttttctgatggtggtactatcaatgcattattggttattgttttttttatttgattttttattggaagtaagaaatgtatctcatgaagccttttcagtgacaggtcggtgctcttcttgacagaaggatagtgccatacatacttccagtcttctcatttgttgtgctttattcaaagcttccacataaggtatctctacatctcttgatactagttccatccttatatttggccattcttgtacatgatgactgatgttgtgtttcaggagcttcgcttcattatggcttcgattcccatgcttaatgtgtctgcttcactagcagcaagcagaatgtgagcataaccaatcttctgtcatatctagttcctactccctctatttcacaatgtaagtcattctagcatttcccatattcatattaatgttaatgaatctagacatatatacctatctagattcattaacaccaatataaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtactattttatcaatttactgatccaagctaggaatgctagcttcattatcagaactccttttatttcatacccttcgtattgaatggcgtttcctctctttctttgctttgcgatttcgacccgtgaatatatgtttgtctatcttcagatataataacagaaagaaaactgggtggaagttactttatgttctcatgattggtggctttctttccaggtacaataatttaaccatggttatattgtaaaatattaatatggtatcctttttcaagtagcacaatatatgctactgttggaaactcacatataattatatagtctaggatactctggtgtaactttcatggcatcctacaataattatcctggtggatatgctctaaaggctctacatgaagcaggtgagacctacataagttatgtggaatacgtgaaattatgatagttttcttctgttaacaaaactgcaagggcttggctgaaccgcaagcagcacattacaaattgaacagctagtagtgtctcatctagtggtgtctactgttttagcgattatggggtatgttgacaataatatctttattgatggcacatactattggttgcttctcttttaccagattctgtaatgaaggacaaaattgttcacattgatgccttcactgcaatgagtggagtttcacgtttctgtgaaagtgaatatccttggaggtatcctctgtagtgttttatctttgttagtatcttttatcatgccatttatgagcatctcaaaatctgttcactggcagatattctaaggaggaaaaaatttccatcgaggaatatcaggaaagaaatttcacatatctgctgaagtaagtttacttacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgttaatgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaatactagaaagtcttacattgtgaaacggagggagtatttgctaaaataccttatgcacttatttttgttactatctggatatttaaagattgaagcggacttttgcaagcaccactgagaagtggggcctacatatatggggagttcacctaatgttggaaaagtccttgtattacctccatgtttgtttgagtagaagcaaattaccgaacaactcttgttaccatgcatgaataaatataatcaaaggcacaactggtactcatttcacgctgtaatgcttttcttatttcttattgttgtaccaaacagtgaacaccgccatatcagtggctacaagtgcttgtttgccgtggatggattctccagagcgaaaattcaacctcgaatcccactactctcactggtacgctatcattctttacagagtagctatctaccttatcggcatgcagattacatactccagccaaatgccagcattgccatcctatttctggttctgtcaaacattaaactcacggtggtgattgaatactggctctggtcgctaacctcagcatttactgcaggtgaaagagccaaaagtgtttgcacatgggaatacgagagaccctgatattctttcgctgaattggcccggttgcccttgaggtgaggatactgatcggatctctaccacaggaccactaactgccaattgtgaagatgcccagcctgtgtaaatcactggatcaatcgagccccttcccaaaccccagctcggaagatactacaccttgccacctttgggctattcaaggctcacactttagcgcaaaaaactcgcgtttttatgttgaaaccatgtgcttcggtttctgacctagttgctcgtatctggtggccaaaaggaggggaaaaaaaactgaggaataggagagaccataacaatcttgtgctctagcaagttgctccatttcatacacaagtaccatgtatcctatcttacattacgtcaacccacttgctgtatagcgtgactcttggccgatg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0544900, RefSeq:Os04g0544900