Os04g0552000

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Revision as of 11:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0552000| Description = Expansin/Lol pI family protein| Version = NM_001060036.2 GI:297603134 GeneID:4336601| Length = 1901 bp| Definition ...")
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Gene Name

Os04g0552000

Description

Expansin/Lol pI family protein

Version

NM_001060036.2 GI:297603134 GeneID:4336601

Length

1901 bp

Definition

Oryza sativa Japonica Group Os04g0552000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28044102..28046002

Sequence Coding Region

28044207..28044369,28044463..28044575,28044921..28045114,28045367..28045691

Expression

GEO Profiles:Os04g0552000

Genome Context

<gbrowseImage1> name=NC_008397:28044102..28046002 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28044102..28046002 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttccaggttccagctgattttgtcgaccttcgttgtcattgccgctgtcaccatgcttccacgcccttgcgcttccatcgagttccaccgcaagctctccagctggtccaatggcggagctacgtggtatggcgctgcaaatggcgccggaagtgatggtggtgcatgtgggtaccagggtgccgtcttccaggcaccgttctcgtctatgatcgccgccggcagtccttccatctacaagtctggcttgggctgcggctcttgctaccaggtgaaatgcactggaaatagcgcttgctcgggcaacccggtgactgtcgtcctcaccgacgagtgccccggaggcccgtgcctcagcgagccggtccacttcgacctgagcggcacggcgttcggtgccatggcgaaccccggccaggccgaccagctgcgcgcggccggcgtcctccaaatccagtacaaccgcgtgccgtgcaactggggcggagtgaagctcaccttcgtcgtggacgtcggctcgaaccccaactacttcgccgtgctcgtcaagtacgagaacggagacggtgacctctccggcgtggagctcatgcagaccggcgccggcgccgcctggacgcagatgcagcagtcgtggggcgccgtctggaagctgaacgccggctcggcactgcaggcgccgttctccatccgcctcacgtccagctccggcaagacgctcgtcgccagcaacgtcatcccttccgggtggaagcccggcatgtcgtacatatcgacggtgaacttctaa</cdnaseq>

Protein Sequence

<aaseq>MASRFQLILSTFVVIAAVTMLPRPCASIEFHRKLSSWSNGGATW YGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSACS GNPVTVVLTDECPGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC NWGGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVW KLNAGSALQAPFSIRLTSSSGKTLVASNVIPSGWKPGMSYISTVNF</aaseq>

Gene Sequence

<dnaseqindica>106..268#362..474#820..1013#1266..1590#acacacagcccacaccacctctcatcgactcatttgcttgcatcttccaaatccttgcaaagcaacaacaatcctagcaagtttagctaagcaggtatagcagccatggcttccaggttccagctgattttgtcgaccttcgttgtcattgccgctgtcaccatgcttccacgcccttgcgcttccatcgagttccaccgcaagctctccagctggtccaatggcggagctacgtggtatggcgctgcaaatggcgccggaagtgatggtaaatacgttgtcatcagatgagagtttcttcgaaaagaaaattcatgcctatgtatgtcatgtcttaacagtgcaatatctgtgtgtacaggtggtgcatgtgggtaccagggtgccgtcttccaggcaccgttctcgtctatgatcgccgccggcagtccttccatctacaagtctggcttgggctgcggctcttgctaccaggtacatatataccgacagatcagaatatatatctagtataattaagtctgtgcacatacatgtactccctccgtcccaagatgtttgacgctgttgactttttaaaaaatatttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgatttattgttaagtatacttttacgtatacatatagttttacacatttcacaaaagtttttgaataagacgaacggtcaaacatatttaaaaaagtcaacggcgtatttagggaaggagggagtatatgcctgtattgcatctaacattggaaatcaacaatataatttttcaggtgaaatgcactggaaatagcgcttgctcgggcaacccggtgactgtcgtcctcaccgacgagtgccccggaggcccgtgcctcagcgagccggtccacttcgacctgagcggcacggcgttcggtgccatggcgaaccccggccaggccgaccagctgcgcgcggccggcgtcctccaaatccagtacaaccggtaagcgagcatctttcacttccgtgcaaaaattgctgcagcagcaatggccaaaagtcggccaagcagcagaacacttgcagttatcacggcttcactcatcttttcttatcaccacgcatggaccaccggccaccggggcacatgcactgcttcagctataacctccatgcatgcaactgtccttcaattcttcttctcgtgttggtttctttcaaacgatccgatcgaacgcacgtgatgtgtgtacagcgtgccgtgcaactggggcggagtgaagctcaccttcgtcgtggacgtcggctcgaaccccaactacttcgccgtgctcgtcaagtacgagaacggagacggtgacctctccggcgtggagctcatgcagaccggcgccggcgccgcctggacgcagatgcagcagtcgtggggcgccgtctggaagctgaacgccggctcggcactgcaggcgccgttctccatccgcctcacgtccagctccggcaagacgctcgtcgccagcaacgtcatcccttccgggtggaagcccggcatgtcgtacatatcgacggtgaacttctaacgatcgcaagcaatatctcaacttgcatgcttgctgcatgcatgtgtctgcagtctgcaggcatatgttagatcggttattcgttggtgcaacaacgatgtgtgctacagggctacaggtttgtcgtaagtgtgaaattaataacggcgagatgcagaggcggaggcgcagatgatttactagttctcccctcctcgccgcagtacgtgtcaatgattatcgttatacgtgtttactgtgtgtattatttgtatcagaacagagccgaccagtgcttataaacgtgctatatatgaacatattcgcattgt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0552000, RefSeq:Os04g0552000