Os04g0551700

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Revision as of 11:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0551700| Description = PAP fibrillin family protein| Version = NM_001060034.1 GI:115459797 GeneID:4336599| Length = 4663 bp| Definition = ...")
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Gene Name

Os04g0551700

Description

PAP fibrillin family protein

Version

NM_001060034.1 GI:115459797 GeneID:4336599

Length

4663 bp

Definition

Oryza sativa Japonica Group Os04g0551700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28031720..28036382

Sequence Coding Region

28034793..28034892,28035693..28035757,28035900..28036382

Expression

GEO Profiles:Os04g0551700

Genome Context

<gbrowseImage1> name=NC_008397:28031720..28036382 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28031720..28036382 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cacgcgaaaattctcgcgccgattccgaggggcaaccgccgcctcgcccccgcgccccctgccgccggcggcttcctccgcgccctcttcccctcacggcgctcccgccctccgccagagaaggacgagctcctccgcctcatcgccgaccaacgccgcggcctcgacacccagtccgacccctcccgcctcgccgacatcgtctcctgcatcgacgccctcgccgccgctgctcccggatccgataccgtttccgatgccgacaagctttccggtacgtggcggctcctctggaccaccgagcatgagcagctcttcatcgtgcgcaacgcccccttcttccgcaccgccgccggtgatgtgttccaggtaatcgacgtccccggtggcgccctcaacaacgtgatcaccttcccgccctctggcgcgttcgtcgtgaacggctccatcgagatccagccgccccagcgagtcaattttaggtttacacgcgctatgttgagagggagcaattgggaggtcccgtttccgccctttgggaaaggatggtttgacactgtctatttggatgatgacatccgcgtagcaaaggacatacgaggggactatttagttgttgaacgcgctccatattcatggaatggatag</cdnaseq>

Protein Sequence

<aaseq>HAKILAPIPRGNRRLAPAPPAAGGFLRALFPSRRSRPPPEKDEL LRLIADQRRGLDTQSDPSRLADIVSCIDALAAAAPGSDTVSDADKLSGTWRLLWTTEH EQLFIVRNAPFFRTAAGDVFQVIDVPGGALNNVITFPPSGAFVVNGSIEIQPPQRVNF RFTRAMLRGSNWEVPFPPFGKGWFDTVYLDDDIRVAKDIRGDYLVVERAPYSWNG</aaseq>

Gene Sequence

<dnaseqindica>1491..1590#626..690#1..483#cacgcgaaaattctcgcgccgattccgaggggcaaccgccgcctcgcccccgcgccccctgccgccggcggcttcctccgcgccctcttcccctcacggcgctcccgccctccgccagagaaggacgagctcctccgcctcatcgccgaccaacgccgcggcctcgacacccagtccgacccctcccgcctcgccgacatcgtctcctgcatcgacgccctcgccgccgctgctcccggatccgataccgtttccgatgccgacaagctttccggtacgtggcggctcctctggaccaccgagcatgagcagctcttcatcgtgcgcaacgcccccttcttccgcaccgccgccggtgatgtgttccaggtaatcgacgtccccggtggcgccctcaacaacgtgatcaccttcccgccctctggcgcgttcgtcgtgaacggctccatcgagatccagccgccccagcgagtcaattttaggcaggcttcctccagctttttgtttaggcttaacataatcatctgttctttccaaaaagaagacatcatcgtctgttgtttcatcagcttgtggtaattagagcaactgctgattgttttattttatgtttgcttgttgcaggtttacacgcgctatgttgagagggagcaattgggaggtcccgtttccgccctttgggaaaggatggtgagtggaagatattcttcaattggtagtatcatgcacttcactcgaataatcttacaagttgagttccaatgaaatagcaaaaacaaaggagacagaaaaaaatgtggaagcatagcacgagatattgtgcattgtttgcaacaattttcaaggaatgaaatcgtatctagcattcatggattgatattgtgttcacgtaatcgtaaaccatttcattaaatcaaatacattactctcgcagtcataattattttaggtaagataagaattggtcaaacttttaaaattttgaccataaattattggtcaaatgcttagtttaaaagccaaaaaaggggtatacttagatttgactcaaaaatatatatatcataaatttattctaatctaaaattaatcatccgagttttaaaagtttaaccgaatcttgtcctaagtgtcaaatatgtatgaccagaaatagtttttggaactgtgctgcataatcaacaatttataagtctaacaaacttttcatttttgttactagatgaccaaatcatcatctacaagggctttcctttcccacctccatttttagggatggtgtatatgttttcttcacctgatcagtagagagtgaatgtaaataaagctggactggaaacacatttttaccagttaggtctttgacatttgttcagtttatcagttctgtttcgttttatcagtttctggtttgacaccatctatttggaaatttggcttgtatgtgttaggtcttttgacatttacataatatatgcctctactttcaggtttgacactgtctatttggatgatgacatccgcgtagcaaaggacatacgaggggactatttagttgttgaacgcgctccatattcatggaatggatagttgttaaaattcaaagttgattgaatgcatagccagtcttgtgatgtgccttgtgaatataagaagcagattgtcagagccttgtgctttctcagcaaagtgttaaccatcgtgctatgacatttcttttcctagacaatactatgttctcccggaattagatggtaagtttgattagtaatgcatgtgcagcaaggttcttcttccaaggaattgtctaggttaaataatacctaggtatcccctatgtgagagaacacaaacttgccaagtatttgatgtgcttttggacatatgaaaaagatgctgcccattacggtgaactacgttagcgaacttgacagcatattgttatggcccacgatatcaagagccatgatggaattgttgactgtttcagtaccttttgttagtattgttttgcctgttgcttccagctttaagtagtagtttttcacattgaagcaagttctcagcaaatcaggtctatgaatgccatcatctgattaagatgagtaaactatgtatggtcttgctttatgctgtatcagggttccttttccttttatactcatgaggagtcaatgagatcaaatccaactttgctttgggaaaagtagcattgtagtgtcgcaagcttaatgatatgaaacattagattcagtttctgtaaccacttacccatgatttctaattctaggggtttcagatacagtgttatgtttcattccatctatcaattgaccactgaagatcagatcaactttttgcagggatcggactctatccttctactgcccccttggaatgctggcaggatttgtagtgcaatgagaagagaattcaatttgccatgtctgaattttcctggttatttttgtttgctcgtttctttatctaggaaaaattctgctcaatacctggtttaatttttgctgcatcgtcaatgctccctgtcatttaagaaaagtaagtgaaaaggtatctatgtgatagattgattgaacatcactacttctccatgatattccaggcctgaacagaagcactgaagcaaaatacttttgaaatgctttcgttggtcctactgttgaactgaatagcaagttctcctttcaacagcttgtttcaagtgtctagtctgataattgcttccttgtactagactactgcaggttctagtcgcagtcgaacaacatatggtgaggctttaggaggacaggttggaccatggccctgggccagactacattgtgtgatgttgggcagtttgtgtacgctacgtgtgaactcatcagctcatcacgaaccagcatagaattatttttcttagtttgcttttgtttgtttggataccatttccttcaccttgagatatttggttaaggtggattgaacttagtaatgaagcaattcttttgtaatagcaggccctccctgaccaagtactggagccacttcaaaggatagaaggcaaaggctccccatgtgaaaaaggacgctccatgaccctgccatgtgtggtcatctgcgatttggtgtcccatggacagtgatgcactgattccacccttcgagtcttaaaagcaatccaaggttagtttacataccttttgcagcttagaaatactgaggataaaacgaagatagtatatcgtacacactgctggtctatagatgatctgctggtggccacaaacctttgcgtgacacttaatttggtggagtagtattttgatcttactggtatccttatatatatttctgaataaactagtatacaatggacaaagtcagttgatgtttccaaagaaaagcttgtgccgacatcaattaatcattttaaagttgcaaaaggagctataatgcttgagcatatctggaaaagtatgattaaagtatgcatccatacaaatcaaccacaatatattcaagattgaggatatttgaacaacatttgtagcttgtgcatgtttaacgggagcagaattattagtttctcttttttttaaaaaaaaccgaaggtagccatttgaatatattaaagagaaaagctaaaaaacaaagtgcatgcccaagcaccacacgctaaccacacaagcataaaccactgagagtttagagcctaacaccaaaacgatccccactaaacgtgaccaacaacaccaaaacaagaccggcttcactccacctcctcatgccgaggtggttttcgccgagctctttggcctcgcagccaccttcccatcttgccgctagcttaccatcggcatgctccagcggcggcgaggtggaagaggggtggagatgtggcggcacgggtggctagaatttcgccccgagccgcccacgcgaggacgacacaggggagggagtagtagattgctagcagcaaccattttttcttttttatattagttctttaggaatgtgagcaggattattagtttttctgtttttagatgaggatcattactcgtttttcaggaacgtgttcacagcttttctttcttttctttttctttattttttttgcatgcaatacggatatgttcgtcagagcgaatggtgtcatcctataatccgtgctgcaaattcaatgatccagttactctagagacggaaggcacgcgtcatagtatcatactccgtactttgtttacactgtctctatactctgatagacgaaaggcacacagcacactggcatatcgttatcctctgtcagtatagtacagtaaagcaacagccgttcggcactgcaaatctactactatcgtaggagtatactgtatgtggattggatagatgtacataatgagatggaacggctttgcgttttgcagccgcccggatggtagccagcagtccagcaccaagagctccaagacacggcggaccgagccagccggagggaggggatgattgagacagcggcctctgcggcgacgacagtggatcgtgagcagatttatcctgccacgagataagtacattgtactgctgactccgtttcaaaatatagctatttttagcataatactttgttctaaaataaagctatttcttcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0551700, RefSeq:Os04g0551700