Os04g0558400
| Gene Name |
Os04g0558400 |
|---|---|
| Description |
Acyl-CoA thioesterase family protein |
| Version |
NM_001060068.1 GI:115459865 GeneID:4336637 |
| Length |
6415 bp |
| Definition |
Oryza sativa Japonica Group Os04g0558400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:28382650..28389064 |
| Sequence Coding Region |
28382789..28382804,28382880..28382972,28383671..28383738,28384204..28384285,28384420..28384466 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:28382650..28389064 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:28382650..28389064 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggatcgggaagaagtgacggagttcctcggccaggtgcccctcctgcagtgcctccccagctcctccatccgcaggatcgccgacgccgtcctggtgaagcgctacgaacctggtggttacgttgctcgtgaaggtgaccctgtagatggcctttacatcatattggatgggcaggctgaggtttcagctcctgcaaacacagaagaagaaaaccgccctgactatgtgttaaataagtatgactactttggttatggaaccaatagttctgtgcatcaagtaaatgttattgcagtatcaaagctgacctgcttcgtattgccaaatcaatatggacacttgttgcaaccaaagaccatttggagtgcagaagagacacctgagaaccattctttgctagaacaaattttgcacttagagccattggaggtcgatatcttccgtgggtttactttgccaggagctccgacttttaggcaagtttttggaggacagttgataggacaggcactagcagcagcatccaagaccgttgactgcctaaaagcggtgcacagtttgcacgcaattttccttatcgcaggagacaagaatttgccaataatatatcaggttcatcgggcgcgcgatggaacaagctttgccaccagaaaagtggaggcaaagcaaaagggccttgtcattttcaccttgattgcttcattccagaaagacgaattagggtttgagcatcaagctgcaatcatgcctgatgttcctcctccagaagagctcctgaatctggaagagatacgggaaagaagacttactgatcctcgcttcccaatgcaatataggaactcagctgccaagaaaaagttcgtaccttggcccatagaaatgaggttttgtgaagattcagcatctcaacataaaccaagcttaaattattggtttagagccagaggaaaactttctgatgatccagcactgcataggtgtgttgtagcatatgcttcggatctactatattctggtgtcagcctaaatcctcatagggagaagggtctgaagacatactcactcagtcttgatcactcgatttggttccacaagcctgtgaaagctgatgattggcttttatatgtgatcgacagcccatctgcacacggtgggcggggttttgttacagggcgaatgttcaaccgacaaggagagctcgtcatgtcgttgacccaagaggcgctgattaggagggcgaagacgccaggacaaccgtcacaaaccccaaggccaaagctttga</cdnaseq> |
| Protein Sequence |
<aaseq>MDREEVTEFLGQVPLLQCLPSSSIRRIADAVLVKRYEPGGYVAR EGDPVDGLYIILDGQAEVSAPANTEEENRPDYVLNKYDYFGYGTNSSVHQVNVIAVSK LTCFVLPNQYGHLLQPKTIWSAEETPENHSLLEQILHLEPLEVDIFRGFTLPGAPTFR QVFGGQLIGQALAAASKTVDCLKAVHSLHAIFLIAGDKNLPIIYQVHRARDGTSFATR KVEAKQKGLVIFTLIASFQKDELGFEHQAAIMPDVPPPEELLNLEEIRERRLTDPRFP MQYRNSAAKKKFVPWPIEMRFCEDSASQHKPSLNYWFRARGKLSDDPALHRCVVAYAS DLLYSGVSLNPHREKGLKTYSLSLDHSIWFHKPVKADDWLLYVIDSPSAHGGRGFVTG RMFNRQGELVMSLTQEALIRRAKTPGQPSQTPRPKL</aaseq> |
| Gene Sequence |
<dnaseqindica>140..155#231..323#1022..1089#1555..1636#1771..1817#1927..2052#2431..2506#3015..3104#3500..3612#4554..4616#4688..4743#5080..5172#5436..5492#5569..5670#5756..5804#5896..5964#6064..6150#atctccttcgctttaaattttgtggtagatttttgtctccttcgctctccacgctaccgcctcgccgtgccggagcccgggcgttccccgccgccgagaacctccgcctccgcctccatctcctccgccgccgccgcagatggatcgggaagaaggtaaagcagcgcagagcccgccgaatttaggagcgctcctggctaatccgaggggtggttgccattggtgtgcagtgacggagttcctcggccaggtgcccctcctgcagtgcctccccagctcctccatccgcaggatcgccgacgccgtcctggtgaagcgctacggtgagtagcacacggtccccatcactgtatcactcgctctagtttttgcgaccttcgattggttggtggttatggtgaacgtggcggcggcggattcctgatgctcgttggtgggagatttttttttagattagtaaattagcggtattctccaattgcgtacccgatttttgtggagctcgctggctatgtttgatttgctgctgtgtatgtatatgtataggtttaatcaacttgcttaaaaaggtgactattagaggcttagagcatcaccccctataatagggtgcttccattcaacgcccaagctagctactataagattcattttttttagaacaataacaatgttatagattttctttatagatcatggggaactggggatatcattggcaatagtacacattgatttgacatgtaatgcttgagagaaaattggtatcagttcaataacgaagatcaggcatccaaatccttgcaagcgaggactcaagcctgggtgttcacctacgcctgccacctacctcacttcctctcactgatttagtgatttttagttctcaacgcatgtttggcattatcccctttctagagaagtgttgtttctttttttggtactgaaagtgaatgtggtttcaagttggaatcaagctgattacatgtctgttcgttgtgatacttttcgaattttgcagaacctggtggttacgttgctcgtgaaggtgaccctgtagatggcctttacatcatattggatgggcaggtatgaattggagtatattatttctttgcttagcatttattggcttttatgattaccatactttgggaacaaatatgcaagctgtcatttagccagttgtcagccggattcattgactagtactgtttgtggctgttccaactaccacgctggaacaattgatgaattgttctttaaaaaaatattcggtcatattttgcagcaatgatcatttatgctgggacttggggtgaaggatcagtttgtactttgtagtttcacactttcagagtatcattgttgtcctgatagccagttcctttgctcctgccataactgaatgatataatccaactgttctactctcatgtttttttttgttattatcatagtttatatgatcagttacattatccttgtgatctactgatgaagcagaggccatggaattctcagtattaattctccatctgcattatattgcaggctgaggtttcagctcctgcaaacacagaagaagaaaaccgccctgactatgtgttaaataagtatgactactttggttatggtaagaactatcattacatgacttctgatttttatagtagttcctttttttttatcaagtatataaaccattttttataagatacggagcagctctgtttgcgtactattctaatattctgcattgttttgtaggaaccaatagttctgtgcatcaagtaaatgttattgcagtatcaaaggttccttgttcatgtttctatttttaataacagtataagctgatggtgtccctactgtaataataaatatcttctggcttcagcttattgttagtatcctattttgcagctgacctgcttcgtattgccaaatcaatatggacacttgttgcaaccaaagaccatttggagtgcagaagagacacctgagaaccattctttgctagaacaaattttgcacttagagccattggaggtaagtctaaatgtgttgtgatgtttctgttttgtaaaggtatatatcactttacagtatgattactgtgctgaaaaattatcaggtatcctagttcgtaagatcttatgacttatatactacatacgctaattttgtagctctaccattctttttaccaccaacagcgtgttaagtatcacccattagaggttaacctgatttagattattaatagatcaggctttcatttacatcatctaaaagagacaatttaaggtggatttgcagtttcatatttacacctcctatttataagtggaaagggcaaaatattttgtcacagcaagtcaaatttaagtctgtaaactttctcactgtaatcattatcttttttaggtcgatatcttccgtgggtttactttgccaggagctccgacttttaggcaagtttttggaggacagttgataggacaggcatgttccaactaaaatatcttactttctattatcaatatctgctggatgtttgtatttcaccacttcctttttctgttatgttgcaacattcatatttaagtagaagtgcatgaatccatttgtgaaaaataaaagataaaaaagggagcttctttaacatgcttctgaatcatttttttgctgctttttggaaaacttttggactttcctcgttgatcacagagggccagtttttgtaatagcatggatgtaagtgccaaaggaggaaaaaacattgtaaaggcggttcacataggacagcattattttgctcaaacatgttttcttcaatggtatattaatcttctgattaaattgttaaattgtttgtccatgaaaattgtttttccactactcattctcatgcactcccaaaagaaagttcaaacactagaaagagtacacacatccatgtcaaagattttcactatgtctgaactttgtttgttattggaccctcatgtaggcactagcagcagcatccaagaccgttgactgcctaaaagcggtgcacagtttgcacgcaattttccttatcgcaggagacaagaattgtaagttctctaagcttgtgtagtagttctcttctcaatcaagttgaatttaaactactccaacaaaaaatgcaattttgggaaccactagtctatcatatcacgaagaggtgacctaagaagaaaccaatgccaacaaaatgtaactttgataaccactagtctattagatcaagaaaggatggtttaagacaaagctttactctgccttccaaattatgcattgtccctgacttagaaatgagcagtggattaatttgtgcaaacttttttatgagtctatcttttgagctgtcatcttagtaagctgcaaataattatgcagtgtaattttatttatttgaaaaaaagaataaatctgatcatgtctgtttctgttttgtcctctgttgtagtgccaataatatatcaggttcatcgggcgcgcgatggaacaagctttgccaccagaaaagtggaggcaaagcaaaagggccttgtcattttcaccttgattgcttcattccaggtgtttatccttctggtacccagttttgtgaacaatgtacagcctcaggaaaattttggcatattagtattgatcaagcatttgattctctcgatggcttccattttgggcctgtttggttctcttccattgctagccttgccaattttttggcaatggcaagatttggcaagccaaaaaaattggtggaggtggctgttttgagtgataccaaaatttttagactaggctagtgcttaagttaaccaaaccaaaaaaaattggcaatgacaaatttgtggcttcattcctacaaaccaaatgagcgacatttttgtagcagtgcattatttggtaaggttgggtttggcaaagaagcaaacaagctcaactccctcccatcataaatatttggtgtttaggacaagaattattaaaacttttgaaacttcgaccatgaatagcttctcaaatgcttagtttaaaaacaaaaaatgggtatagacagatttatttttaaaaataatatcttaatatcatgaacttactagatttggtaagcctattctaatataaaactgatagttaaagttttaaatgtttgacaatcttgtcctaaacgtcaaatatttatgaccatagggagtaaaattttaactacacttttaacaatatattacagtaaaggtagtggtcaaaactgtgttgtggagaccacatcattgtttataaactttttttgtgactagagggaccagtagaatgttctttttgcaatattcaatattcatactgaacgctgtcaacgataacgaactgtttgaactcttgttaaatcctgaggaaatgtgtattttcatgtttatactactttatacattaagccaaaaggttcgtgagactaaatctgccagcagaagaatagatggtatctaacttctgcatgatcaattatgttgcagaaagacgaattagggtttgagcatcaagctgcaatcatgcctgatgttcctcctccagaagaggtaattttttttcctttcctgtaatgtatatgggaaagaagaattgataattaataggtaatcaaatgcagctcctgaatctggaagagatacgggaaagaagacttactgatcctcgcttcccaatgtaattttcatgacttccaaccatatatttgatgatgatagtttcctagctaatgcagttctcagatgattcatctttaatcttcagaataaacttcttttatgttattgagaaagcattatatttgtcaccatttatttctcggacactatatttgtcaccattactcagatgaatctagcatctggtattacataaattagaaattatctggtagtatttctcacgtttagtaaatcaagcattctatcttcttaagcttcaattataactgtatttggttcgtgccacagtcgcatgccacctggcaaagtcttgactgttagtcatctgcaggcaatataggaactcagctgccaagaaaaagttcgtaccttggcccatagaaatgaggttttgtgaagattcagcatctcaacataaaccaaggtatgtacacactgtgttttctttcagtgcagcctgctcataccttctctcctcccctagttggtgataactgataagtttaccacgaaattcttgtgtactttcatattcacgattctaaattccactgtgaaaacatccaattttaattccattgtgcaagaatttatcgcatttcctgctacattgcaatttaatacattgttctgattcattagtgcatctattccattatctaaaaaaatgtatccaatttctttcagcttaaattattggtttagagccagaggaaaactttctgatgatccagcactgcataggtttgccatctaatcactataccgtgtttcttgtattatagatgattgggcacgacattaaaccatggtattacaggtgtgttgtagcatatgcttcggatctactatattctggtgtcagcctaaatcctcatagggagaagggtctgaagacatactcactcagtcttgatcactcgtatgtttcagcaaaccgcacccagtactgcgattttaattaatacaactcgctagtaaaccgtttgtttgttactgttctgcaggatttggttccacaagcctgtgaaagctgatgattggcttttatatgtggtaagccattgatttttacctctcaaatgatacacaaaactaaatttctgcttgaggttcttatggcaacaccttcccttaataaacacagatcgacagcccatctgcacacggtgggcggggttttgttacagggcgaatgttcaaccgacaaggagaggtatatgccttcgttgtttcaaagcttagttcagttctgcattgcttctgtgatggaaatgtttatcaacttactatgatgtcttcgcaactgctttagctcgtcatgtcgttgacccaagaggcgctgattaggagggcgaagacgccaggacaaccgtcacaaaccccaaggccaaagctttgagaggtgcagaagagcagtattatcgtttcatttttggcactttcacagttattttccttttcaatggaagtctataacacgtagacgtgaagccgaagtatagcatactgcatatatgtagcaagaaaaaacgatggtaaaactggttctgtaattcacgaacagcttactgacataccacgtatgtattggatcgggaaaaataagcgaagaacttggtatcgctttttttttatctcaataaagccttcaattatttcaattt</dnaseqindica> 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