Os04g0565500

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Revision as of 11:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0565500| Description = Amino acid/polyamine transporter II family protein| Version = NM_001060110.1 GI:115459949 GeneID:4336684| Length = 1...")
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Gene Name

Os04g0565500

Description

Amino acid/polyamine transporter II family protein

Version

NM_001060110.1 GI:115459949 GeneID:4336684

Length

1495 bp

Definition

Oryza sativa Japonica Group Os04g0565500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28740273..28741767

Sequence Coding Region

28740380..28740993,28741084..28741657

Expression

GEO Profiles:Os04g0565500

Genome Context

<gbrowseImage1> name=NC_008397:28740273..28741767 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28740273..28741767 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggctccacaaggaggcgagctcgtcgtcgtcgcggctcgacgcggcgccgctgctgccgcaccacggccacggcggcggcggcgcggggcaccacctgtcgtcgcagcccaagacgttcgccaacgtgttcatcgcggtggtcgggtcgggcgtgctggggctcccctacaccttctcccgcaccggctgggtggccgggtcggtcctcctcctcgccgtggccgcgctcaccttccactgcatgatgctgctcgtcgcctgccgccgccgcctcgcctacgaccaccccaagatcgcctccttcggggatctgggcgccgccgtgtgcggccccgcggggcggcacgtcgttgacgccatgctcgtgctcagccaggccagcttctgcgtcggctacctcatcttcatctccaacaccatggcgcacctttacccggttggggattcgtcgccctcgtcgccgctcctcaccgccaaggcgatcttcatctgggtcatgctgccgttccagctggggcttaactccatcaagacgctgacgctcctcgcgccgctcagcatcttcgccggacccacggagatcctctacggcctcggcgtcgccgtctatgccttcgagggcatcggcatggtcctcccgctggaggccgaggccgccgacaagcgcaagttcggcggcacgctcgcgctgtccatggcgttcatcgccgtcatgtacgggctgttcggcgccatgggttacctcgcgttcggcgcggccacgcgggacatcatcaccaccaacctcggcaccgggtggctgtccgtcaccgtgcagctgggtctctgcatcaacctcttcttcaccatgccggtgatgatgaacccggtctacgaggtcgccgagcggctgctctgccgcaagcgctacgcctggtggctgcgctggctcctcgtcatggtcgtcgggctcatggccatgctcgtgcccaacttcgccgacttcctctccctcgtcgggagcagcgtctgcgtcctgctcgggttcgtgctgccggcggcgttccacctcaaggtgttcggcgctgaggtcgggtggcccgggctcgccggcgacgtcgccgtcatcgtcgtcgggaccgcgcttgcggtgtccgggacatggacatcgctcgcacaaatcttcagttcttccgatgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MGLHKEASSSSSRLDAAPLLPHHGHGGGGAGHHLSSQPKTFANV FIAVVGSGVLGLPYTFSRTGWVAGSVLLLAVAALTFHCMMLLVACRRRLAYDHPKIAS FGDLGAAVCGPAGRHVVDAMLVLSQASFCVGYLIFISNTMAHLYPVGDSSPSSPLLTA KAIFIWVMLPFQLGLNSIKTLTLLAPLSIFAGPTEILYGLGVAVYAFEGIGMVLPLEA EAADKRKFGGTLALSMAFIAVMYGLFGAMGYLAFGAATRDIITTNLGTGWLSVTVQLG LCINLFFTMPVMMNPVYEVAERLLCRKRYAWWLRWLLVMVVGLMAMLVPNFADFLSLV GSSVCVLLGFVLPAAFHLKVFGAEVGWPGLAGDVAVIVVGTALAVSGTWTSLAQIFSS SDV</aaseq>

Gene Sequence

<dnaseqindica>775..1388#111..684#gattcccccatctctccgacagcgagcttcgtcgtcggctgtgcgcggccgcggcggcggcgctggtcgtgtgcttcccaaattctctcattccccagcgagcgatcaccatggggctccacaaggaggcgagctcgtcgtcgtcgcggctcgacgcggcgccgctgctgccgcaccacggccacggcggcggcggcgcggggcaccacctgtcgtcgcagcccaagacgttcgccaacgtgttcatcgcggtggtcgggtcgggcgtgctggggctcccctacaccttctcccgcaccggctgggtggccgggtcggtcctcctcctcgccgtggccgcgctcaccttccactgcatgatgctgctcgtcgcctgccgccgccgcctcgcctacgaccaccccaagatcgcctccttcggggatctgggcgccgccgtgtgcggccccgcggggcggcacgtcgttgacgccatgctcgtgctcagccaggccagcttctgcgtcggctacctcatcttcatctccaacaccatggcgcacctttacccggttggggattcgtcgccctcgtcgccgctcctcaccgccaaggcgatcttcatctgggtcatgctgccgttccagctggggcttaactccatcaagacgctgacgctcctcgcgccgctcagcatcttcgccgacgtcgtcgatctcggcgccatgggcgtcgtcctcggccaggacgtgtccacctggctcgccaacaagccccccgtgttcgcctccgccggacccacggagatcctctacggcctcggcgtcgccgtctatgccttcgagggcatcggcatggtcctcccgctggaggccgaggccgccgacaagcgcaagttcggcggcacgctcgcgctgtccatggcgttcatcgccgtcatgtacgggctgttcggcgccatgggttacctcgcgttcggcgcggccacgcgggacatcatcaccaccaacctcggcaccgggtggctgtccgtcaccgtgcagctgggtctctgcatcaacctcttcttcaccatgccggtgatgatgaacccggtctacgaggtcgccgagcggctgctctgccgcaagcgctacgcctggtggctgcgctggctcctcgtcatggtcgtcgggctcatggccatgctcgtgcccaacttcgccgacttcctctccctcgtcgggagcagcgtctgcgtcctgctcgggttcgtgctgccggcggcgttccacctcaaggtgttcggcgctgaggtcgggtggcccgggctcgccggcgacgtcgccgtcatcgtcgtcgggaccgcgcttgcggtgtccgggacatggacatcgctcgcacaaatcttcagttcttccgatgtgtaagcggttgacagtaatgcagacaatgcgcaggcaacgcagctagtagctcatgtgtatacattgaatttagcagaaaagaacattcagctggcatgctgattttgggc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0565500, RefSeq:Os04g0565500