Os04g0574600

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Revision as of 11:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0574600| Description = Ankyrin repeat containing protein| Version = NM_001060154.1 GI:115460037 GeneID:4336732| Length = 4178 bp| Definiti...")
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Gene Name

Os04g0574600

Description

Ankyrin repeat containing protein

Version

NM_001060154.1 GI:115460037 GeneID:4336732

Length

4178 bp

Definition

Oryza sativa Japonica Group Os04g0574600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29323458..29327635

Sequence Coding Region

29323589..29323861,29324879..29325342,29325569..29325683,29325837..29326484,29326609..29326701
,29326985..29327122,29327224..29327493

Expression

GEO Profiles:Os04g0574600

Genome Context

<gbrowseImage1> name=NC_008397:29323458..29327635 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29323458..29327635 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcctcgccggagagcaggcctcctcgctcgctcttcgacctccccgcggacttcttcgattcttcttccctcctcggatcccacccttcctcggccccctctgcggcggaaccgtccgagtccatccggccggcggcggccccgcctctatcgcagccgtcggaggctccggggttgaggtggacatgcaacacctgcgcctctgaattcgagtcgctgcaggaacagcgcgagcacttcaagtctgatctccatcgcctcaacgtcaagctgagcattgctggtaaaactattatcaaggaagatgacttagacaaagcagatcccgattctctgttcgatgatttggaggtatctagtgtatctggatcagaggatgaacttgaaaatgggcctgcatcagatcgtggtctctcagccaaagacaagggagaattcaggaagaaactttattttcgctgtcattctggtgacacagtttctatctggagatgcatactgttgaaagaacatgaagagccagttttcaatagcaagtctggtcagacagaaagtcatggatctacaccatttgtacaagaggatgaaatgctaaatagagtgaagaatttgacatctgagcctcgtgatgcatcacgtttgaggatcattctactaacaagtggtggacattttgctggatgtgtttttgatggaaactcagtcatagcccataaaacatttcataggtatgttgtaagggcaaaggctggaaagaggcagtctgggaaagatgctactgggaaggttgcacattcagcaggctcatctcttcgccgttataatgaagcggcattgaaaaaggaaattcaagaattaatagcttcttggaagtcatactttgacctttgtgtctgtgtctttatgtatgctccgtcaaagaaccgtcaaatgctctttgatggggataagactcagtcggtattgcaggcttgtgatattcgtccaatcccattgactgttcatcggcccaccttgaaggaagcaaaacggttatatactaacctaacacagctctgttatgagatggaatgcttgagtacggatgaaccccatgtagaggatgtgacaagttttgaacaaagtaaagaggcaaagcagaaaaaaattatggattctgaggaatctatttctgtctcgtccttaagtttggacttgccaaataagcacgaagggacatccatacatccatctaataatgaaacaacgcctcttcacgaagcagcaaagtctggcaatgctcagcaaacactggagttgcttgagcagggtttggatccttgtattaaagatgcaagaggaaaaacaccttacttgctggcttcggacaaagaagttagaaatacattcagaagatttatggcactcaacctagacaaatgggattggcatgcggctgatgtgcctagtgcactaacaaaggaaatggaagaatcacaagctgcaaagcaggcagagaaggatgccaagaagaaggcaagagcaaaggaactgaagaaattgaagaaagcaagagaaaaggaaaaggagaaagaaaaagaaaaggcacaagcatcacagtcccaaaggacccaatctaatgtaagaggcacttcagctggtcaaatggccaatgcaactgcttctatgccaggcctgaaacaaaagcatcagctgccccagcctacggcactttcgaaagaggaggaacgacaaaggaaactcgccgaggaaagagagaaaagagcagccgcagccgaaagaagatttgcggctctggcggcacaatcaagtagcacatcagggacagcagcagcagaacatcccccacagagagcagccgcggcagacgatacttcttgttcgtgctgtttttcttccttggtcggcaaagtaccattccacaggtacaattacaagtactgcagcaccacatgtatgcatcttcattcagaaatgctggaagatgattga</cdnaseq>

Protein Sequence

<aaseq>MAAASPESRPPRSLFDLPADFFDSSSLLGSHPSSAPSAAEPSES IRPAAAPPLSQPSEAPGLRWTCNTCASEFESLQEQREHFKSDLHRLNVKLSIAGKTII KEDDLDKADPDSLFDDLEVSSVSGSEDELENGPASDRGLSAKDKGEFRKKLYFRCHSG DTVSIWRCILLKEHEEPVFNSKSGQTESHGSTPFVQEDEMLNRVKNLTSEPRDASRLR IILLTSGGHFAGCVFDGNSVIAHKTFHRYVVRAKAGKRQSGKDATGKVAHSAGSSLRR YNEAALKKEIQELIASWKSYFDLCVCVFMYAPSKNRQMLFDGDKTQSVLQACDIRPIP LTVHRPTLKEAKRLYTNLTQLCYEMECLSTDEPHVEDVTSFEQSKEAKQKKIMDSEES ISVSSLSLDLPNKHEGTSIHPSNNETTPLHEAAKSGNAQQTLELLEQGLDPCIKDARG KTPYLLASDKEVRNTFRRFMALNLDKWDWHAADVPSALTKEMEESQAAKQAEKDAKKK ARAKELKKLKKAREKEKEKEKEKAQASQSQRTQSNVRGTSAGQMANATASMPGLKQKH QLPQPTALSKEEERQRKLAEEREKRAAAAERRFAALAAQSSSTSGTAAAEHPPQRAAA ADDTSCSCCFSSLVGKVPFHRYNYKYCSTTCMHLHSEMLEDD</aaseq>

Gene Sequence

<dnaseqindica>132..404#1422..1885#2112..2226#2380..3027#3152..3244#3528..3665#3767..4036#tttctgatccaacggcgcgcgcagttgcctctggaagaccgaagcgaacccggctcctcacataccgcacacctcgccacgaaacgccggaaaccccctccgccgccgccgcctcctcctcctcctaccagatggcggcggcctcgccggagagcaggcctcctcgctcgctcttcgacctccccgcggacttcttcgattcttcttccctcctcggatcccacccttcctcggccccctctgcggcggaaccgtccgagtccatccggccggcggcggccccgcctctatcgcagccgtcggaggctccggggttgaggtggacatgcaacacctgcgcctctgaattcgagtcgctgcaggaacagcgcgagcacttcaagtctgatctccatcgcctcaacgtatatctatccgcccaccctcctcctctaatttgcattaggataataaactgttttcttttgttagttctgatctgggtgactgggtggatatcttcagacttcagtagattaatttctcaattatattttttgcacaatggatttagtttctgttccatacaagatttcatttgttattggagatgaaccaccgtacgacacgagcctgatagcaggaaacttgatataaattgccatggcactggatcccaaaacgttgatactatcagtaaaacaggtcctaaggatgaatttaacattgctagggaggctccttaatctaaggaagctttactaactccagcaagatgtttattttattatacctacaaaaaagaggtaatgaattcaaggcttgaattctaagcttggtaggaagataattaagaattttaaatccgagatggcaaaaaatctctaatagtttacattctttctctagtaatcggataccatgatctggtctattggtatccacaaacttgacatggaaaatttaggcacatggtgatgttttctgctagaacataagcacatagctatttcataggggataatctactcctgttcgtctttgtcatgacctgaggccatgacgggatagccaccgctgggaaagatagccggatgacgtcggctcttggagaagggatgtagacttaggttggggagaagaacattagggcaagagattagactaattgattttcattgcttaacgataataggcacactccatccttatatagatggaataactttacctctaagtaaggactcatctaatcttctctttactctaaccgacatcttatccccagctgtgctacagtatcacgaggcactattcattcaccagggattgggctcatgggcctcggcctctcggcactattcattcaccaggcatgcacatggatcattatgtcacatcttactgatcctcttgcatctctttttttggcattcttttaggtcaagctgagcattgctggtaaaactattatcaaggaagatgacttagacaaagcagatcccgattctctgttcgatgatttggaggtatctagtgtatctggatcagaggatgaacttgaaaatgggcctgcatcagatcgtggtctctcagccaaagacaagggagaattcaggaagaaactttattttcgctgtcattctggtgacacagtttctatctggagatgcatactgttgaaagaacatgaagagccagttttcaatagcaagtctggtcagacagaaagtcatggatctacaccatttgtacaagaggatgaaatgctaaatagagtgaagaatttgacatctgagcctcgtgatgcatcacgtttgaggatcattctactaacaagtggtggacattttgctggatgtgtttttgatggaaactcagtcatagcccataaaacatttcataggtaaacaaggttgtctgtttcaacttttatttataattatacattgttattagctgtaatgttttcgtagataacactatggtgatttttctgtattctctgtacattgtaaagaaccatacaatctcagtatctcacatcatcatacaatgtcttgacttttttaatgaatacaaggtttatattggtaataagtatcgacaattgttgtccatttatattttaggtatgttgtaagggcaaaggctggaaagaggcagtctgggaaagatgctactgggaaggttgcacattcagcaggctcatctcttcgccgttataatgaagcggcattgaaaaaggtaccatacgttccgaagcaaatgtcctttacgttcctgttcatcggaaactaatacatttatttctgaactcaaatatagcatatattaacaagcagactacaaataatatctaaactggttcatgtttcccattggttaatgttgttgcaggaaattcaagaattaatagcttcttggaagtcatactttgacctttgtgtctgtgtctttatgtatgctccgtcaaagaaccgtcaaatgctctttgatggggataagactcagtcggtattgcaggcttgtgatattcgtccaatcccattgactgttcatcggcccaccttgaaggaagcaaaacggttatatactaacctaacacagctctgttatgagatggaatgcttgagtacggatgaaccccatgtagaggatgtgacaagttttgaacaaagtaaagaggcaaagcagaaaaaaattatggattctgaggaatctatttctgtctcgtccttaagtttggacttgccaaataagcacgaagggacatccatacatccatctaataatgaaacaacgcctcttcacgaagcagcaaagtctggcaatgctcagcaaacactggagttgcttgagcagggtttggatccttgtattaaagatgcaagaggaaaaacaccttacttgctggcttcggacaaagaagttagaaatacattcagaagatttatggcactcaacctagacaaatgggattggcatgcggctgatgtgcctagtgcactaacaaaggaaatggaagaatcacaagctgcaaagcaggtgagttttatgtcccctgaataatggtttatgttttctctttcattgccctttaggagctgctacttgtgatctgtttgagtgaatgccctgactgtgttagttggcatgcattgtgttgtaggcagagaaggatgccaagaagaaggcaagagcaaaggaactgaagaaattgaagaaagcaagagaaaaggaaaaggagaaagaaaaagaaaaggttagtgctgatctcattttcgctgtaagactagtcaatctgatcacatatgtggaatagatcttcggttgcacatggatgcaatatcctgttttttttggtgataaccgttgaaaggtacatgcacttgttgcattgaatgtgctatacttgatggtgtttagtccacttaaataccactttcattgattggcaaatattacttataactagttggattaaaccatctttgagacatctatacagtttcttattcatggcacatgatccttatacattgtaggcacaagcatcacagtcccaaaggacccaatctaatgtaagaggcacttcagctggtcaaatggccaatgcaactgcttctatgccaggcctgaaacaaaagcatcagctgccccagcctacggcactttcgaaagaggtgtgttatatgtagcattatggcaacaatattacacttggagtggttttcaagtagacgaatatattatgacatttatacctttttatactgttaattaggaggaacgacaaaggaaactcgccgaggaaagagagaaaagagcagccgcagccgaaagaagatttgcggctctggcggcacaatcaagtagcacatcagggacagcagcagcagaacatcccccacagagagcagccgcggcagacgatacttcttgttcgtgctgtttttcttccttggtcggcaaagtaccattccacaggtacaattacaagtactgcagcaccacatgtatgcatcttcattcagaaatgctggaagatgattgaggaaatcaggaaattgtatgacgagagacatgagatttaattatacctttcacctgtttttcttatgcatgagattcaataacaggtctatctaccagtcttgcttaatctttagctaatccgaatcttgttacaaatttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0574600, RefSeq:Os04g0574600