Os04g0574700

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Revision as of 11:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0574700| Description = C4-dicarboxylate transporter/malic acid transport protein family protein| Version = NM_001060155.1 GI:115460039 GeneI...")
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Gene Name

Os04g0574700

Description

C4-dicarboxylate transporter/malic acid transport protein family protein

Version

NM_001060155.1 GI:115460039 GeneID:4336733

Length

2258 bp

Definition

Oryza sativa Japonica Group Os04g0574700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29328275..29330532

Sequence Coding Region

29328426..29328971,29329066..29329871,29329947..29330331

Expression

GEO Profiles:Os04g0574700

Genome Context

<gbrowseImage1> name=NC_008397:29328275..29330532 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29328275..29330532 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagccaagccgtcctcgtcgtcgtcgtcgacgggcggccaccacacggtggacatccgcgcggcgcaggcgcagcccgaggacgcgaggcagtcggcgatgagcgggccgatcaacatccgcggcgagcggaggccgccgccgatgcagcgggcgttcagccggcaggtctccctcggcagcggcgtgacggtgctgggcatggacaaggtgggcaagaacggcggccgggggcagcagcgtgcgctcccgcgcagcggcaagagcctcggggtgctcaaccacaccggcgccctcggccaggccgccgccggcgacggcgcggcacgcaggggagacttcagcatgttccggacgaagtcgacgctgagcaagcagaactcgctgctgccgtcgaggatcagggagcccgacctcgagctgccgccgcacgtcgagggcccctccgtcggcaggcagggcggcgaggaccctctcaacaagagcgtccccgccggccggtacttcgccgcgctccgcggcccagagctcgacgaagtccgcgactacgaggacatcctgctgccgaaggacgaggtgtggccgttcttgctgcggtttccggtcggctgcttcggtgtctgcttggggctcggcagccaggccatcctgtggggcgcgctggcggcgagcccggcgatgaggttcctgcacgtcacgccgatgatcaacgtcgcgctgtggctgctcgcgctcgccgtgctcgtcgccgtgtccgtcacctacgcgctcaagtgcgtcttctacttcgaggccatccgccgcgagtacttccacccggtgcgcgtcaacttcttcttcgcgccgtcgatcgccgccatgttcctcaccatcggcctgccgcgcgccgtggcgccggagaggttgcacccggccgtctggtgcgcgttcgtcgcgccgctgttcgggctcgagctcaagatctacgggcagtggctctccggcggcaagcggaggctgtgcaaggtggccaacccgtcgtcccacctctcggtggtgggcaacttcgtcggggccatcctggcggcgagggtcggttgggcggaggccggcaagttcctctgggccatcggcgtcgcgcactacatcgtggtgttcgtcacgctgtaccagcggctgccgaccaacgaggcgctgcccaaggagctccacccggtgtactccatgttcatcgccacgccgtcggcggcgagcctcgcgtgggcggcgatctacggcagcttcgacgccgtggcgcgcaccttcttcttcatggcgctcttcctgtacatgtccctcgtcgttcgcatcaacttcttccgcggcttccggttctcgatcgcgtggtggtcgtacacgttcccgatgacgacggcgtcgctggccaccgtcaagtacgcggaggcggagccgtgcttcaccagcagggcgctcgcgctgagcctctccctcatgtcgacgacgatggtgtcgctgctgctcgtgtcgacgctcctgcacgcgttcgtctggaggtcgctgttccccaacgacctggccatcgccatcaccaaggacaggcagaacggcgcgttcaagccgcacggcaaagggaggaaggccggcaagagggtgtacgacatcaagcgatgggcgaagcaggcgccgctctcgctcgtgtcgtccatcaccaagagcaactcggcggacaaggaagaagaggagaaaacagaatga</cdnaseq>

Protein Sequence

<aaseq>MAAKPSSSSSSTGGHHTVDIRAAQAQPEDARQSAMSGPINIRGE RRPPPMQRAFSRQVSLGSGVTVLGMDKVGKNGGRGQQRALPRSGKSLGVLNHTGALGQ AAAGDGAARRGDFSMFRTKSTLSKQNSLLPSRIREPDLELPPHVEGPSVGRQGGEDPL NKSVPAGRYFAALRGPELDEVRDYEDILLPKDEVWPFLLRFPVGCFGVCLGLGSQAIL WGALAASPAMRFLHVTPMINVALWLLALAVLVAVSVTYALKCVFYFEAIRREYFHPVR VNFFFAPSIAAMFLTIGLPRAVAPERLHPAVWCAFVAPLFGLELKIYGQWLSGGKRRL CKVANPSSHLSVVGNFVGAILAARVGWAEAGKFLWAIGVAHYIVVFVTLYQRLPTNEA LPKELHPVYSMFIATPSAASLAWAAIYGSFDAVARTFFFMALFLYMSLVVRINFFRGF RFSIAWWSYTFPMTTASLATVKYAEAEPCFTSRALALSLSLMSTTMVSLLLVSTLLHA FVWRSLFPNDLAIAITKDRQNGAFKPHGKGRKAGKRVYDIKRWAKQAPLSLVSSITKS NSADKEEEEKTE</aaseq>

Gene Sequence

<dnaseqindica>152..697#792..1597#1673..2057#atgctgatacaaaatttaaaagaaaaaataaactagaagtgagataagcgggctaaaataacccgcttgccaccgatcggagcttatattggcctctaccatcttagttcttgggagctcacgtacgtagtatcaactatcaagcggcaggatggcagccaagccgtcctcgtcgtcgtcgtcgacgggcggccaccacacggtggacatccgcgcggcgcaggcgcagcccgaggacgcgaggcagtcggcgatgagcgggccgatcaacatccgcggcgagcggaggccgccgccgatgcagcgggcgttcagccggcaggtctccctcggcagcggcgtgacggtgctgggcatggacaaggtgggcaagaacggcggccgggggcagcagcgtgcgctcccgcgcagcggcaagagcctcggggtgctcaaccacaccggcgccctcggccaggccgccgccggcgacggcgcggcacgcaggggagacttcagcatgttccggacgaagtcgacgctgagcaagcagaactcgctgctgccgtcgaggatcagggagcccgacctcgagctgccgccgcacgtcgagggcccctccgtcggcaggcagggcggcgaggaccctctcaacaagagcgtccccgccggccggtacttcgccgcgctccgcggcccagagctcgacgaagtccgcgtaagtagaaattcttcctcgcatacatggtgaacacgtcaagctgattattccatgcaagaatcatgttgagctagctgtgctgttcttgtaggactacgaggacatcctgctgccgaaggacgaggtgtggccgttcttgctgcggtttccggtcggctgcttcggtgtctgcttggggctcggcagccaggccatcctgtggggcgcgctggcggcgagcccggcgatgaggttcctgcacgtcacgccgatgatcaacgtcgcgctgtggctgctcgcgctcgccgtgctcgtcgccgtgtccgtcacctacgcgctcaagtgcgtcttctacttcgaggccatccgccgcgagtacttccacccggtgcgcgtcaacttcttcttcgcgccgtcgatcgccgccatgttcctcaccatcggcctgccgcgcgccgtggcgccggagaggttgcacccggccgtctggtgcgcgttcgtcgcgccgctgttcgggctcgagctcaagatctacgggcagtggctctccggcggcaagcggaggctgtgcaaggtggccaacccgtcgtcccacctctcggtggtgggcaacttcgtcggggccatcctggcggcgagggtcggttgggcggaggccggcaagttcctctgggccatcggcgtcgcgcactacatcgtggtgttcgtcacgctgtaccagcggctgccgaccaacgaggcgctgcccaaggagctccacccggtgtactccatgttcatcgccacgccgtcggcggcgagcctcgcgtgggcggcgatctacggcagcttcgacgccgtggcgcgcaccttcttcttcatggcgctcttcctgtacatgtccctcgtcgttcgcatcaacttcttccgcggcttccggtgagcacaaccacacacctgctctgctaaccacgccaacactcgcgccgcggcgactgaccgctcccattgcaggttctcgatcgcgtggtggtcgtacacgttcccgatgacgacggcgtcgctggccaccgtcaagtacgcggaggcggagccgtgcttcaccagcagggcgctcgcgctgagcctctccctcatgtcgacgacgatggtgtcgctgctgctcgtgtcgacgctcctgcacgcgttcgtctggaggtcgctgttccccaacgacctggccatcgccatcaccaaggacaggcagaacggcgcgttcaagccgcacggcaaagggaggaaggccggcaagagggtgtacgacatcaagcgatgggcgaagcaggcgccgctctcgctcgtgtcgtccatcaccaagagcaactcggcggacaaggaagaagaggagaaaacagaatgaagcgcaactcagaaatcagaaccaggaattgatgatgcatgtataaatggtcaggatatagccacagggaataacattcacgaacaaggaagatgatgtacacgacatataagttagatcgattaccatcacatataaaaccaatcacgcatcatgtaatgaaatgtctaaaagccatacggcagattatcataccgcgac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0574700, RefSeq:Os04g0574700